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Gene detail [Fasta]

Species Linepithema humile
GeneLH14852
Positionscf7180001004834:516965..523761[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14852
sequence mRNA:
>LH14852-RA
ATGAAACTCAGCGACGAGAAATCTTCTTCGGTAACTTCCGTATTAAATCCTCGTCACATTGTCTTGTTTCAGGACTTGTT
CTCGCAGCTACAGTTTTCTCAAGAGAGCGCTCTGCCACCCGATACGTTGCGTCGTGCGCTAGCCGAGAGCTTTCTCGATC
AACAGAGATTCCAACTTGGTTTTATGGACGACGCGGCGGAATGTTTCGAAAACATTCTCTTACGCATACACCTCCATATT
GCGAGTGGAGAGGCTGAAGATATGTGTAGCGCGAGGCATTGTGTGCCGCATCAGAAGTTTGCCATGACGCTCGTTGAGCA
AAGCGTCTGTGGAGCTTGCGGTGCGACATCGGAGCCACTGCCTTTTACACAGATGGTTCATTACGTGTCTGCATCAGCTT
TGACATCTCAGGCTCATCAAACATCGCTAAATTTGAGAAACAATCCGGATCTGTTTGGACAACTTCTCCGAAGAGCTGGC
GGGATGGGTGACATCCGTGACTGTCCGAGTTCTTGTGGAGCAAAAATTCAAATATGCCGGACTCTGATGAATCGGCCGGA
AATAGTATCTGTTGGCGTTGTCTGGGACAGCGAACGACCGTCATTGGAGCATATCATGGATGTCTTCGCGACTGTAGGCA
CGTCCCTCCGGCTTAGCGACGTCTTCCATAGTGTGGTGGACTCCCGATGGGGTGCCTCGACCGTGCATAATCTTGTGGGA
GTGGTTACCTATTACGGGAAGCATTATTCTACCTTCTTCTTCCACACAAAGTTGAAGGTGTGGATTTACTTCGATGATGC
GACTGTCAAGGAGATTGGACCTCGGTGGGAGCAGGTCGTGGAAAAGTGTAGAAGAGGCCGTTATCAGCCTTTGTTACTAC
TCTACGCGACGCCCGCCGGTACTCCTGTTAACACTGAAAACGCTCCGAAGACTGTTGTCCCTTTTCCGAATGGTAATGGT
CTCAAGACTTCTCCGAAGAACAATGTTCGCCGTTCGATTACGCCTAGTCCCGAAAAGCCATCCATCAACAACACTGCCAG
GCGTGCCATCACACCCAATCCTGACAGTCCGCCTCATCATTACACTCAACGAAGTATTTACAGTGATTATCAGAACCTCA
CGGACATTCAAAATAACATATTTGGCAATCAGGGCGTAGATGTGGTGGACGGTGACATAGAGTCGAAATATATTAGCCGC
CGTGCCGTAGAAAACGTAATGCAGCAGCAGAAAAAACAGCAGATGCAGTTGACACGTAGTTTAAGCGTGGGATCAGCGCC
GCATGATGGCATTAGCATCCCCGATCACATGAACGTGCCTCGGAGACGAGATTCCGGCAATTGGTCCGGTGATCGGAACA
GCGCGTCATCGAGTTCGTCGACTACGATGGACAATTCATATCTGTATCTTGTTAATAAAATGCAAAGAAACTCGGGCATA
CCTAAAAGCCCTAGCAAATCTGGAGAACTATCGAGTAGTAGCAGCGGTCATTACGATGCCGGCTACGACTCGTATTCTTT
ATCCTCCACAGACAGTCTTCCACTTCAGCAAGGTCTAAAGCATAATTTACAGCTTGCTCAAATACCGGAGGGTTATCAGC
CTTCTTCCGGCGATGACTGCGAACGATTGTGCAAGGAAACGGATGCGTTGCTGGATAAATCTCGCGCCGCCGAAGATGCC
GGCGATCTTAACACAGCCGTGGCCTTGTGCAGTGCTGCCAGCAGTAAAGCCAGAGCCGCGATGGACGCTCCGTATAATAA
TCCTCAGACGATCACGATAGCAAGAATGAAACACAATACTTGTGTCATGAGAACGAGGAGTTTACACAGGAGAATGCTGC
AAGAACAAGTAACCGTTAACGGTGACAAAGAAGAAGGAGCATTAGAAGGGAGACATTCGCGAGAGAGTAGTAAATCGGGT
CAACATTCGAGACAGAGTTCGCGAGATAAAGGGAATCATTCAAGGCAAAACAGTCGAGAACTTTTGATAAATGCTCCAAC
GACAGTGGTGGATAAACCAGCCACGAAGAGTATTGAGATTTACGCCACTTTACCGAAGAAGAAGACTCTACGCAGCAAAG
CGACAGCAGTGAACGTTATTGAGGACGAGGAATACATGCTTTACGATCGCCCGACACAAAGGACTGGCTTGTTCAGTCGT
ACAAAACGTTGCGACGACGACAAGAAAGATAAAAAACGCGCAAGAAGCGAGGAAAGGAATAAGAACGTGTCAAAGGATTT
TTCGATAGCGCCATCCCGATCATCGCCGTCTCCAAAAGGAGTGAAGATTGAGAAACCGAAGGAAATCATCGAGCCTAATG
TAACTGCTGTCAGAAGCGCGCAGCCTAACAATACGGCTGCGGCCGAGCAGAAACAGGGTAAAAAGCAGCACAAGATACGC
AGGAAATTGCTTATGGGCGGCCTGATCAAAAGGAAGAACAGAAGCATGCCGGATTTACGAGAAGGACAGGACGGCCAGAC
GAACGTAGCTACGGAGGGATCCGCCAACACGTTACCGAAACAATCAGTGGACGATTCCAGCGTCGGTTTGAAAGGAAACG
ACGCAAGTCAATCGCTGAGCGGTTACTTATCGGAGGGACACTTAGAGTTCACCGGAAATGGCGGACCTGGAAACACCAGT
AATCCGAATCTTGAGAGAAGTCGTTTGATGAGGAAAAGCTTCCACGGTAGCGCCGGCAAAGTCTTACACGTGGCAAAAGT
CCCTCCGCCCCCGCCACTCAGAACCACTTCTCAGCTTAGCAAGTCTAAGTGTTCGGGCGAAGTGCACAACGAGCAGCAAT
CCGACAAGGCTGTGTATCCTTTGCCGGACGGTCGGTGCGCGCCCAACTCGTCGCAGGATCAGAACAACGCTTATTGGAAT
CATATGAATGCGAGCAACTCGTCCAACGCGGCGAATAGAAATTCCAACTATTCTGATTACTCTTCGGAATCGCATTCTCT
TCCATTTTTGCCGTCTTACAAAGAACAAAGCACCAATATTTCTGGAACGTGTCAACCGAGCTACAACAACAAGCCCAGGA
TTCAGGACGACGTCGTGCAGTATGCCAACGGCATATTTTACGAGCCGACCTTCGTCGTCACTCGTGCGGACGTGCACAAT
GAACAAAGTCCCACGAAGCAACAGTTTCAGCCGGACTCTTTGCCACCTTATCCTGAAAACAGCAATGTCTCACATTCGCG
ACAGCCAAGCGAGGACTTCCCGCCTCCTCCGTATCCGTCGATCCACTCGGTGTCGCATTCACGACAAGCTAGCGAGGACT
TCCCGCCGCCGCCGCCGCCGATCGATGAGCCGATTCATTTACAAGAGGCTTCACAGCATCAAGGTTCCGTTCAACCGCAA
CAACGTGTGCAGCAATTCGAAGGGCAGCAGATCAGCAGTCTCTTGGCGCAGCTGCAAAGCAAGAGGGAGCAGATCTTGGC
TGAGCATCAAAATGAAGAGAAGCGACCGGAGGAGCACGAGGACGAAGACAAGTCATCGAGTGAAACGTGGCTGAGAGAGC
TGCAAGCTAAACAGGCAGAGAGGAAGATGAAGAGGCAGGAATCTTTGAATCAGGACATTCCCAAAGTCAGGACTCCGACA
ATTCAAGGGTCGACTATCGCCAGAAGAACCAGCGACTTGATGATGAACACTCTCGGACAGGGATACGATCAAGGTCGCGA
CGTTACGGACTGTCCGCGGGTCGTTTCCTCGGTGAAGGACATGGCCGCCAGATTCGAACAAATTAAATTGCAACCAACTC
CGAAATCAGAAGCAGACGCGAAATCCCCGACGAAACAGAACTGCGTTTCTCCGATGCTTACATCCCAGGAATCGTTATCG
ATGGAGGAAACAAAATCAACTAAATTATCCTCCGAGAATATCGTAACGTTTACGAAAACCGAACCTTCAAATTCTCAATC
CGTTTTAAATTCGAGCTTTGAATCGAATTCCAGTCAAAATGCCTTTATTGCGGCAGTGCCGCCGAACAATTCCAATGCTC
AGCAGAGCGAGTTGAATGCCGCGATATTATCTATGTCCTTGACACTGCCTCATGAGAATGGTTTGCCCGTTGATTATCCG
GAAGACGACATCAGCGAAGTGGCGTTGCAGAACACAATTCAAAACACGACGATACTGCCAAGCGAGGAGGACATTGCCCC
GAAAAAGGTGAAACGGCGGATAGGCAAGAAGAAAAGCGTGTCGTTTTGCGACCAGGTGGTGCTCGTTGCAACGGCGGAGG
ACGACGAGAAGGACTCGTACATACCGAATCCTATTTTGGAGAGAGTCCTGCGTTCCGCGATGAACAAACCTGAAACTGCT
CAAGTGCTGCGAGAAATCAGAAGTCTCCAGGAGGCGGAGATGAATCGCGAGAACACTGCCATGAAATTCCAACAGCAGAC
TCTTCCTTTAAAGAGCGAAGCCGATAGCATGCCGGCGACACCTTTCCAGGATCAGCTGAGGAGC
PEP:
>LH14852-PA
MKLSDEKSSSVTSVLNPRHIVLFQDLFSQLQFSQESALPPDTLRRALAESFLDQQRFQLGFMDDAAECFENILLRIHLHI
ASGEAEDMCSARHCVPHQKFAMTLVEQSVCGACGATSEPLPFTQMVHYVSASALTSQAHQTSLNLRNNPDLFGQLLRRAG
GMGDIRDCPSSCGAKIQICRTLMNRPEIVSVGVVWDSERPSLEHIMDVFATVGTSLRLSDVFHSVVDSRWGASTVHNLVG
VVTYYGKHYSTFFFHTKLKVWIYFDDATVKEIGPRWEQVVEKCRRGRYQPLLLLYATPAGTPVNTENAPKTVVPFPNGNG
LKTSPKNNVRRSITPSPEKPSINNTARRAITPNPDSPPHHYTQRSIYSDYQNLTDIQNNIFGNQGVDVVDGDIESKYISR
RAVENVMQQQKKQQMQLTRSLSVGSAPHDGISIPDHMNVPRRRDSGNWSGDRNSASSSSSTTMDNSYLYLVNKMQRNSGI
PKSPSKSGELSSSSSGHYDAGYDSYSLSSTDSLPLQQGLKHNLQLAQIPEGYQPSSGDDCERLCKETDALLDKSRAAEDA
GDLNTAVALCSAASSKARAAMDAPYNNPQTITIARMKHNTCVMRTRSLHRRMLQEQVTVNGDKEEGALEGRHSRESSKSG
QHSRQSSRDKGNHSRQNSRELLINAPTTVVDKPATKSIEIYATLPKKKTLRSKATAVNVIEDEEYMLYDRPTQRTGLFSR
TKRCDDDKKDKKRARSEERNKNVSKDFSIAPSRSSPSPKGVKIEKPKEIIEPNVTAVRSAQPNNTAAAEQKQGKKQHKIR
RKLLMGGLIKRKNRSMPDLREGQDGQTNVATEGSANTLPKQSVDDSSVGLKGNDASQSLSGYLSEGHLEFTGNGGPGNTS
NPNLERSRLMRKSFHGSAGKVLHVAKVPPPPPLRTTSQLSKSKCSGEVHNEQQSDKAVYPLPDGRCAPNSSQDQNNAYWN
HMNASNSSNAANRNSNYSDYSSESHSLPFLPSYKEQSTNISGTCQPSYNNKPRIQDDVVQYANGIFYEPTFVVTRADVHN
EQSPTKQQFQPDSLPPYPENSNVSHSRQPSEDFPPPPYPSIHSVSHSRQASEDFPPPPPPIDEPIHLQEASQHQGSVQPQ
QRVQQFEGQQISSLLAQLQSKREQILAEHQNEEKRPEEHEDEDKSSSETWLRELQAKQAERKMKRQESLNQDIPKVRTPT
IQGSTIARRTSDLMMNTLGQGYDQGRDVTDCPRVVSSVKDMAARFEQIKLQPTPKSEADAKSPTKQNCVSPMLTSQESLS
MEETKSTKLSSENIVTFTKTEPSNSQSVLNSSFESNSSQNAFIAAVPPNNSNAQQSELNAAILSMSLTLPHENGLPVDYP
EDDISEVALQNTIQNTTILPSEEDIAPKKVKRRIGKKKSVSFCDQVVLVATAEDDEKDSYIPNPILERVLRSAMNKPETA
QVLREIRSLQEAEMNRENTAMKFQQQTLPLKSEADSMPATPFQDQLRS
Swiss-ProtInactive ubiquitin carboxyl-terminal hydrolase 54
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
OrthologiGroup-00154    Inactive ubiquitin carboxyl-terminal hydrolase     

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