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Gene detail [Fasta]

Species Linepithema humile
GeneLH10810
Positionscf7180001004321:44870..49329[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH10810
sequence mRNA: 
>LH10810-RA
ATGGCGACTTTTAGTGAAGACTTATTTGACGTTTTTGATGAGCGTGGCGATGATGCCGAAATACCGGACATCGCGTTAAA
GACAATCGAACTTGATGCGAGATTAAAGCGGCAACATGACACGGATGATGAAAAATCAATTGTTAAAAAATTACGACAAG
ATCCTGTGCTGGATGACATTAACTTAGAGGAAGTAGCATGTCGTATAAAAGTGCATGCTATAGACACTATAGAATCTTGT
ACGCATGAAGTCGCTATTCCTCCTGATCAAGATTATGTTCCTTTGGAACGTAATCAGGATAAACCAGCAAAAGAATATAA
ATTTATACTTGATCCGTTCCAAAAAGAAGCAATTTTATGTATAGACAACAATCAATCAGTTCTTGTTTCCGCACATACAT
CTGCTGGTAAAACTGTTGTAGCCGAATATGCGGTAGCATGTTCACTCAGAGATAAACAGAGAGTAATATACACAACTCCG
ATTAAAGCGTTGAGTAATCAAAAATACAGAGAATTTTATGAGGAATTCAAGGACGTTGGTCTAGTAACAGGCGATGTTAC
AATAAATCCAACAGCTAGTGTATTAATTATGACCACTGAAATTTTACGTAACATGCTCTACAGGGGTTCAGAGATAATGC
GTGAAGTCGGCTGGGTGATATTCGACGAAATTCATTACATGCGCGATAAAGAGAGAGGCGTAGTGTGGGAAGAGACGCTT
ATATTGCTGCCGGACAATGTGCACTATGTGTTTCTTTCTGCTACTATACCAAATGCACGACAATTCGCGGAATGGGTGGC
ACATTTGCACAATCAACCCTGCCATGTGATATCTACAGACTACCGACCCACCCCATTGCAGCATTACATATTTCCAGTTG
GTGGCGACGGTATTCATTTGGTTGTAGACGAAAATGGCCAGTTTAAAGAGGAAAATTTTAACAGAGCCATGGCGTGTCTG
CAGAATGCAGGCGATGCGGCTAAAGGTGACACAAAAGGTCGAAAAGGTGGTCTACGCGGCACGAATAGCGGGCAAACAAA
TATTTTTAAAATGGTAAAAATGATTATGGAGAGAAACTTCGCGCCTGTAATTATCTTCAGTTTTTCAAAAAAAGATTGCG
AATCTTATGCGATGCAAATGGCTAAGCTGGATTTGAATACGTTAGAAGAGAAGAAATTGGTGGATGAGGTTTTCAATAAC
GCTGTGGACGTTCTGAACGACGAGGACAAAAAGTTACCGCAAGTTACAAATTTGCTGCCGCTTTTGCGACGTGGAATTGG
CATTCATCACGGTGGACTCTTGCCGATTTTGAAGGAGACCGTTGAGATACTGTTCGGCGAAGGTCTTATCAAAGCACTTT
TCGCCACTGAAACGTTCGCGATGGGCTTGAACATGCCGGCGCGGACGGTTCTGTTCACGGCACCCCGTAAATTCGACGGT
AAAGATTTTCGTTGGATCACATCGGGTGAATACATCCAAATGTCCGGTCGCGCCGGCAGAAGAGGTCTTGACGACAAAGG
GATCGTCATATTGATGATAGACGAGCAAGTTAGTCCAGTCGTTGGTAAAGCAATTGTTCAAGGAAAACCGGATCCGATCA
ATTCCGCGTTTCATCTGACGTACAACATGGTTCTTAATCTTCTCCGGGTGGAAGAAATTAATCCGGAATACATGTTGGAA
AGGAGCTTTTTCCAGTTTCAAAATCAAGCTGGTATTCCCGCTTTGTACAACAAGGTAACGGAATTGTACGACACTTATAA
TACCGTGAATGTCGAGAGGTACGACGAGATATCTTCTTATCATGACATACGCGAACAACTTGATCAGTTGAGCGAACGGT
TTCGGTCGTTTTTAACGCGACCGGAATATTTGCTTCCATTTTTGCAACCTGGAAGATTAGTGAAAGTGAAAAACGGGAAC
GAAACGTTTGATTGGGGCATCATAGTGAACTTTAGGAAGAAAACCCCGAAAAATCCAATGAAAGACAAAACTGTTGTAGT
TATTGACATTTTACTGCACGTATCGAAAAGTTCTAAAGAAGGCAATCCAATTCCTTGTCGCGAAGATGAAGAAGGCGAAA
TGGAAGTGGTTCCCGTTTTGCATCATTTAATTTCTCAAATCAGCTCGCTTAGATTGTATTACCCAAAAGACCTCAGGCCG
TCTGACAATAGAAAGAGCGTATTGAAAACGATACGGGAGGTAACGAAAAGATTTCCAGATGGCCTGCCGTTGCTTAATCC
CATCACAGATATGAATATAGGAGATCAGGCCTTTAAAGATATCGTGAAAAAAATTGAAACGTTAGAAAAAAAATTGTACG
CACATTCTTTGCACAAGGATCCCAATGTAAATATATTGTATGAACAATTTTTACATAAAGAAGAATTAGCTGCACAACTA
AAGCAAGCCAAGGAGGAATTTAAGCAGGCTAAGTCGATACTTCAAATGGACGAACTCAAATGCAGAAAGCGAGTTTTAAG
GAGGATGGCGTATTGCACAGCGGCGGACGTTATAGAACTGAAAGGACGTGTAGCCTGCGAACTGAACGGTGCCGACGAGC
TACTAATGACAGAAATGATCTTCAATGGTCTTTTTAACGCTTTAAACGTGCCACAGATGGTGGCGTTGATAAGCTGTTTT
GTATGTGACGAAAAATCAAACGAAATGCCTAAAAGCACGGAAGAATTAAGCGGCCCGCTCCGACAGATGCAGGACTTGGC
TCGAAGAATAGCAAAGGTTTCTACAGAAGCAAACTTGGAATTGGATGAGGATGCGTACGTCGATAGATTTAAACCATTTC
TAATGGACGTTATATATGCTTGGTGTAAAGGCGCAACGTTCTTACAAATTTGCAAAATGACAGATATATTCGAAGGATCT
ATCATCAGGTGCATGCGGCGTTTAGAAGAGGTACTTCGACAGTTATGTCAAGCTGCGAAAGGTATCGGGAATACAGATCT
AGAGAACAAATTCAGCGAAGCGATCAAACTTATAAAACGTGATATCGTGTTCGCTGCGTCCTTATATTTATGA
PEP: 
>LH10810-PA
MATFSEDLFDVFDERGDDAEIPDIALKTIELDARLKRQHDTDDEKSIVKKLRQDPVLDDINLEEVACRIKVHAIDTIESC
THEVAIPPDQDYVPLERNQDKPAKEYKFILDPFQKEAILCIDNNQSVLVSAHTSAGKTVVAEYAVACSLRDKQRVIYTTP
IKALSNQKYREFYEEFKDVGLVTGDVTINPTASVLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETL
ILLPDNVHYVFLSATIPNARQFAEWVAHLHNQPCHVISTDYRPTPLQHYIFPVGGDGIHLVVDENGQFKEENFNRAMACL
QNAGDAAKGDTKGRKGGLRGTNSGQTNIFKMVKMIMERNFAPVIIFSFSKKDCESYAMQMAKLDLNTLEEKKLVDEVFNN
AVDVLNDEDKKLPQVTNLLPLLRRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDG
KDFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMVLNLLRVEEINPEYMLE
RSFFQFQNQAGIPALYNKVTELYDTYNTVNVERYDEISSYHDIREQLDQLSERFRSFLTRPEYLLPFLQPGRLVKVKNGN
ETFDWGIIVNFRKKTPKNPMKDKTVVVIDILLHVSKSSKEGNPIPCREDEEGEMEVVPVLHHLISQISSLRLYYPKDLRP
SDNRKSVLKTIREVTKRFPDGLPLLNPITDMNIGDQAFKDIVKKIETLEKKLYAHSLHKDPNVNILYEQFLHKEELAAQL
KQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTAADVIELKGRVACELNGADELLMTEMIFNGLFNALNVPQMVALISCF
VCDEKSNEMPKSTEELSGPLRQMQDLARRIAKVSTEANLELDEDAYVDRFKPFLMDVIYAWCKGATFLQICKMTDIFEGS
IIRCMRRLEEVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL
Swiss-ProtSuperkiller viralicidic activity 2-like 2
KEGG     K12598  MTR4, SKIV2L2; ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00270  DEAD; DEAD/DEAH box helicase     
SMARTSM00487     
ProSiteProfilesPS51192  HELICASE_ATP_BIND_1; Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.     
CoilsCoil
PIRSFPIRSF005198     
OrthologiGroup-00609    Superkiller viralicidic activity 2-like     

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