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Gene detail [Fasta]

Species Linepithema humile
GeneLH16674
Positionscf7180001004922:158695..162615[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16674
sequence mRNA: 
>LH16674-RA
ATGATACTTATAAAGCGTAACATATCAAAACAGCTAATGCAAAGAAGTACCTTATTGGCGTCTGTATGCAGATCCACAAT
TTTTGGCACGAGTTTCACGAATATTCAACCATGTAGAGGCAAGAAAAATGACAGTAATTCAAATTTGCCAGAATCTTTGT
TCCATCCTGTGCCTATCAAACCAAATCCAGATGATATAAACATTGGCGCTGAATTGACTGGGTCTGTGATAAACAAGAGA
GACCTTTTAAAAATATTAAATTCTTTCACACAGAAATCAGAAATCAAGGAACTAGCACAGGAATACGGATTAGACAGCTA
CCTTCAGGGACAAGCTTTCACAAACTTTAGACAATATTGTTTGCAAGCAGAATCATTGCCAGTGGACCTTCACATAGTAC
TCAGTGATATTCTACAAGGTGCTGGAAATATCAGTGATATTTTTCCTTATTTTATACGTCATGCTAAACAAATGTTTCCA
CATATTGATTGCTTGGATGATCTCAAAAAGATTAGTGATTTACGAAATCCTGCTACTTGGTATCCAATAGCAAGATCAAA
AAATAGGAAAATAATCTTTCATGCTGGACCAACAAATAGTGGAAAAACTTATCATGCTTTAGAAAGATTCATTAATGCTA
AAAGTGGGGTATATTGTGCACCATTGAAATTATTAGTTGCAGAAGTATTTCATAAATGTAACCAGAGGGGAACACCATGT
GATTTATTAACTGGGGAAGAACGGAAATACGCCAAGGACCCTGATAATCCGGCAAATCACTTATCTTGTTCCGTAGAAAT
GGCGAATCTACAGAACACTTATGAGGTAGCTGTAATCGATGAAATTCAATTAGTGCGTGATATTCAAAGAGGTTGGGCAT
GGACGAGAGCTCTTCTTGGAATCCCCGCAGACGAAATACATTTATGCGGTGAAGCTGCTGCTATAGATTTGGTAGAATCT
ATATGCATTACGATGGGCGAAAGTGTGGAAGTACGCAGATACAAGCGATTAACAGAGCTTGTAATAGAAAATGAAGCGCT
CGGTTCTTTGAACAATGTTAAACCGGGAGATTGCATAGTCTGTTTTAATAAAAATGATATATTTACCGTATCGCGCTCCC
TTGAGAGTAGGGGAAAAGAGGTGGCAGTGATATATGGCAGTTTGCCACCAGGCACCAAGTTGGCACAAGCTGCAAAATTT
AATGATCCTAACAATTCTTGTAAAGTTATGGTGGCGACTAATGCGATTGGAATGGGTCTGAATTTGCACATTCGTAGAAT
TATATTTTATTCGTTGATTCAGCCAACGATCAACGAAAAAGGTGAAAAAGAAATGGAGATTTTAACCGTTTCGGCGGCTC
TGCAAATAGCAGGCCGCGCTGGACGTTACGGCTCAGCTTGGGAAACGGGCTATGTAACAACATATAAACGGGAGGATCTA
CCGACTTTAAAACATTTGTTAAGTCAGGCACCAGAAATAATAACACAAGCTGGTCTTCATCCGACACCAGATCAAATTGA
ACTGTATGCTTATCATTTACCAAATTCACCATTGTCGAATCTTATGAATATTTTTGTGTCATTGTGCAAATTTGACGATT
CTCTTTACTTCATATGTAACTTAGACGACTTTAAATTTTTCGCCGACATGATACAGCACGTTCCGTTGCCACTCCGTGCA
AGATATGTATTTTGTTGTGCGCCAATTAATAGGAAATCACCATATGTGTGCACTATGTTCTTGAAGTTTGCACGCCAATA
CAGTAAAAATGATGCAATAACATTCAATTGGTTGTGCCAACACATTGGTTGGCCTTTCAAGACACCAAAGACTATTCTTG
ATCTCGTTCATCTGGAAGCCGTGTTTGATGTGTTGGATCTTTATTTATGGCTCAGTTATCGTTTTGCGGATTTATTTTCG
GATGCTAAAGTGGTCCGCGACGTGCAGAAGGAACTGGATGCGCTTATCGAAGCAGGAATACTTAGATTAGTAGCTTTACT
ATTAAACTCAGACGCAGGTGGAGAAACTGATAGCTTTGAATTGCAGACACAAAAACAAAACTTTTATAGAGATTATCAAA
CAACTGGCAAACGTGACACAAATAAAGGTAAATTGACTGAAAGATTAATAGCAGAAGGGCTCTTAACGCCACAGATGTTA
CGTGAATTGCAATTCGAATGGATCAAGTCATTGAAAAAGAAAAAATAATGTAACATAGCATGTGTGTCAAATATAAATAT
TATATCAATA
PEP: 
>LH16674-PA
MILIKRNISKQLMQRSTLLASVCRSTIFGTSFTNIQPCRGKKNDSNSNLPESLFHPVPIKPNPDDINIGAELTGSVINKR
DLLKILNSFTQKSEIKELAQEYGLDSYLQGQAFTNFRQYCLQAESLPVDLHIVLSDILQGAGNISDIFPYFIRHAKQMFP
HIDCLDDLKKISDLRNPATWYPIARSKNRKIIFHAGPTNSGKTYHALERFINAKSGVYCAPLKLLVAEVFHKCNQRGTPC
DLLTGEERKYAKDPDNPANHLSCSVEMANLQNTYEVAVIDEIQLVRDIQRGWAWTRALLGIPADEIHLCGEAAAIDLVES
ICITMGESVEVRRYKRLTELVIENEALGSLNNVKPGDCIVCFNKNDIFTVSRSLESRGKEVAVIYGSLPPGTKLAQAAKF
NDPNNSCKVMVATNAIGMGLNLHIRRIIFYSLIQPTINEKGEKEMEILTVSAALQIAGRAGRYGSAWETGYVTTYKREDL
PTLKHLLSQAPEIITQAGLHPTPDQIELYAYHLPNSPLSNLMNIFVSLCKFDDSLYFICNLDDFKFFADMIQHVPLPLRA
RYVFCCAPINRKSPYVCTMFLKFARQYSKNDAITFNWLCQHIGWPFKTPKTILDLVHLEAVFDVLDLYLWLSYRFADLFS
DAKVVRDVQKELDALIEAGILRLVALLLNSDAGGETDSFELQTQKQNFYRDYQTTGKRDTNKGKLTERLIAEGLLTPQML
RELQFEWIKSLKKKK
Swiss-ProtATP-dependent RNA helicase SUV3 homolog, mitochondrial
KEGG     K17675     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF12513  SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
OrthologiGroup-00518    ATP-dependent RNA helicase SUV3 homolog, mitochondrial      

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