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Gene detail [Fasta]

Species Linepithema humile
GeneLH22896
Positionscf7180001005037:1798683..1803124[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22896
sequence mRNA: 
>LH22896-RA
ATGGGCGGCTACGTGCCACCCGGGCCGAGGTTCAACTGTCCGAAAGACGTGATTTACATTTATCCCTGCACTTGCCTTCG
GGGTAGCGACAGAGGTTTGTACGTCCGCTGCGAAAACACGAATCTGGCAAGTCTCAGCCTCGCCTTTGCGAATCTGGGAA
ACGAGGGCATGCCGATCGAAGAACTGACTCTGTATAAATGTAACATAGTACGATTTTACGGACCCGCCCTGTATCCGTTG
GACGTTCGAGTGTTGAAATTCATCGACACGCCGCTGAGATTGATCGAGGAGCACAGCTTCCTCGGCGTGAACCGAACACT
TCAGGAGCTGTACGTGACAAACAGCGACCTGGAGAAATTCCCACGCGAGGCGTTGCAGGTCCTCGGTAATCTCAGTCTGT
TAAGCATCACCGGTCACCGGATATCTACTCTGCCGGGGAATAGTTTCGGTGAAAGCGCGGTGGCCGCAAAACTGGAAAAA
TTGGAGATTAGTAACGGTACGCTATCTTCATTGCCGGTAGAAGCGCTGACGCCGCTCAAGAAACTGAAAGCGCTCGATCT
GCACGACAACAAAATAAAAGACCTGCAGAGAAATCAATTCAAAGGACTCAGGGACACTGAATTCTTAGATCTCTCTCATA
ACTTGATCGATAAGTTAGACGCGTCTCACTTAGCCGATCTTGTCAAGATGGGATGGTGTAACATGTCGCACAATGCTATC
GCCGACTTGAAGAGAGGAACCTTCGCCCGAAATTCCGTTTTGAAGGTCCTGAATCTGAGTCATAATAAAATTAGAAAATT
GGATTCGAACACTTTCCGCGGTATGCGTTTTCTCAGACGACTGCATCTCAGTGACAACCAAATCAACGATGTAGGTCGCG
GAACTTTCGGTTCCGTTACTAGAATCGGCACGATCGATCTCTCTCGGAACTTCATTAAAAAGATCGACTTCCAAATGTTC
CACCAGTTGCAATATGCTGAGCTTATAGACGTTTCCGAGAATTTTGTGACAACTATAGAGAAACTGGCATTCAAAGATCT
TTATCTTGCAAAAGTGAATCTGTCTCATAACGAGATTTCGAAGATCGAACCAGGTGCTTTCGAGAACTGTGCAAATATCA
CGTCGCTGGATCTTAGCTACAACAAGATCGACAACATCTCGAGGTATTCTTTCGACAGCACGTCATACGCTATGGAAATG
CAACTTAGTTATAATCTACTGACATCTCTAAATCAAGTTCCATTGCACAACATGACGGGAATGAAAGTATTAAACGTTTC
TCACAATCTGATACACTCCGTTCCACGACAGACCTTCCCTAAATTGTACGAGCTCCACACAATCGATATCTCGCACAACA
ATCTGTCCGAGATACACAACGCTATATTTCAGACACTCTTCAGTCTGCGATTTTTGAATTTATCGCACAATTCTTTGGAA
AAAATAAAACCGTCGACATTCGGGCCGCTGCCTACGCTTTTAGAGCTCGATATGAGCTACAATCAATTGAACGACGTTGC
GCGCGGCAGTCTCACTCGATTAGCCAGCTGCAGGAGCTTGACAGTAAAAAACAATCGTCTGACGAAGATTTTCCAACTAC
CGAATTCTCTGGGTCATCTGGACTTTTCGGAGAATCTGTTGGAGGAAATCCCGAGCACTGACGTGTGGCCCTCGATGAAC
GCGCTGCTCTCGCTGGATCTTTCGCGGAATCGACTGGGCGATAATTTACAAAAAGGGAGTTTCGAAAACTTGCTGACCTT
GAGAATCTTAAATCTGCAAGCGAACAACATCACGAAGCCGCCCTGGCAAGCGCTGAGCAGTCTGAGCAGCTTGCAGTATC
TTTATCTGCAGGATAATTACTTGACGAAACTGGAAAAAGCCGCCTTCGGTCACTTGCCAATAGTGTTCGAATTGAATATG
GCAAACAATAGAATAAACAATGTGACGACTCGTGCGTTCGAGGGCCTGTTGCAGCTGCTAACATTAAATCTGACCAGCAA
CAATATTAGCCACATACCGAACGGCGCGTTTCAAGGTCTGGTGTCTTTGAGAACTCTCGATTTATCGTACAATAAATTAG
AGAAGCTGGATAACAAAACGCACGGATTGCTCGACGACTGTCTGTCATTGGAGAGACTCAACCTTAGCCACAATAAAATT
TCGTTTATTACTCGGAAGACTCTGCCAAATGATCCCTGGATCCCGTACAGACTGAAAGAAGTCGATTTGTCTTACAACAC
AATGCCGGTCGTCACTTTTGACCTCATTGCCGGCGCCAAGAAGCTTCAATACTTGAATCTCTCTCATAATAATATTAATG
AGATTAGGCGATATGTAATCGGGAATTTAACGGCTTTGCAGATTTTGGATTTGTCGCACAATGACATAAATGACGTGTCC
GAACGAGACGTTTTTCTGCCACCGTTAAATTTAACCAATTTGCACCTGAGCAACAATCATCTCAATCATGTGCCTCTCGA
TAAGATTCTACCACTACCGAATCTGAAAGTTCTCGATCTGGAAAAAAACGAGATTGGCGTTTTTGACGAGAAATTTATGA
AGATTATTAAGAACGGCACAATTCTCAAATACTCTGGAAATCCTATACATTGTGACTGCCATGCTCGACCTTTAAAGAGA
TGGCTGAAGTCTCAAACGTACCTCCCGACAGAATGGTCGAGCGTGATGTGCGAGAGCCCGAATTATCTCGCGAACAAACC
TATCTCGGAGGTAACTGAAGATCTTATGAACTGCGGCGAGAGAGAGATTCAAGAAAAACCGGAACTCGGTATCACACCCG
ATGTGAAATACCGGAGTCTCGACTACAACACTAAAGACAAGAGTTGGAAAGCGACGTGGTTCGTAACGTCGAGAGAAGAC
ATCGGCGACTTTTATATCGTCGTTCGAGAAACCGGAAGCAGTAAATCCATGATCGAGAAGGACGTCGTTTACAGCGAGCG
ATCCTTCAGAATCCACGATCTAAAGGACTCGGACACAAAATACGAGCTCTGCGTGCTCGCGCGTGATTCCGAGGGAAACG
TCAAGCACTATAGAAACTCGCAGTGTCAGATTTTAAATCAGCACAGCTCCGGTTCGACCATTAGCCTCAGGGCGAGCCTG
TACTTCGTGATAGTCGTTGCTTCCTTTTGCACCCTTATACGAGATTTTATCTGTCCCGAAAATGGTATTTACAGCATTTA
G
PEP: 
>LH22896-PA
MGGYVPPGPRFNCPKDVIYIYPCTCLRGSDRGLYVRCENTNLASLSLAFANLGNEGMPIEELTLYKCNIVRFYGPALYPL
DVRVLKFIDTPLRLIEEHSFLGVNRTLQELYVTNSDLEKFPREALQVLGNLSLLSITGHRISTLPGNSFGESAVAAKLEK
LEISNGTLSSLPVEALTPLKKLKALDLHDNKIKDLQRNQFKGLRDTEFLDLSHNLIDKLDASHLADLVKMGWCNMSHNAI
ADLKRGTFARNSVLKVLNLSHNKIRKLDSNTFRGMRFLRRLHLSDNQINDVGRGTFGSVTRIGTIDLSRNFIKKIDFQMF
HQLQYAELIDVSENFVTTIEKLAFKDLYLAKVNLSHNEISKIEPGAFENCANITSLDLSYNKIDNISRYSFDSTSYAMEM
QLSYNLLTSLNQVPLHNMTGMKVLNVSHNLIHSVPRQTFPKLYELHTIDISHNNLSEIHNAIFQTLFSLRFLNLSHNSLE
KIKPSTFGPLPTLLELDMSYNQLNDVARGSLTRLASCRSLTVKNNRLTKIFQLPNSLGHLDFSENLLEEIPSTDVWPSMN
ALLSLDLSRNRLGDNLQKGSFENLLTLRILNLQANNITKPPWQALSSLSSLQYLYLQDNYLTKLEKAAFGHLPIVFELNM
ANNRINNVTTRAFEGLLQLLTLNLTSNNISHIPNGAFQGLVSLRTLDLSYNKLEKLDNKTHGLLDDCLSLERLNLSHNKI
SFITRKTLPNDPWIPYRLKEVDLSYNTMPVVTFDLIAGAKKLQYLNLSHNNINEIRRYVIGNLTALQILDLSHNDINDVS
ERDVFLPPLNLTNLHLSNNHLNHVPLDKILPLPNLKVLDLEKNEIGVFDEKFMKIIKNGTILKYSGNPIHCDCHARPLKR
WLKSQTYLPTEWSSVMCESPNYLANKPISEVTEDLMNCGEREIQEKPELGITPDVKYRSLDYNTKDKSWKATWFVTSRED
IGDFYIVVRETGSSKSMIEKDVVYSERSFRIHDLKDSDTKYELCVLARDSEGNVKHYRNSQCQILNQHSSGSTISLRASL
YFVIVVASFCTLIRDFICPENGIYSI
Swiss-ProtChaoptin
SUPERFAMILYSSF52058  L domain-like superfamily     
Gene3DG3DSA:3.80.10.10     
PfamPF13504  ;      
SMARTSM00365     
ProSiteProfilesPS51450  LRR; Leucine-rich repeat profile.     
PRINTSPR00019     
ProSitePatternsPS00107  PROTEIN_KINASE_ATP; Protein kinases ATP-binding region signature.     
OrthologiGroup-00231    Chaoptin      

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