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Gene detail [Fasta]

Species Linepithema humile
GeneLH22860
Positionscf7180001005037:1572852..1580490[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH22860
sequence mRNA:
>LH22860-RA
CGCGCAACGCGGCGAGTACGTCCGCCATTATTAGGTTGCACATTCTTGCCTTCGCATCTTGTTGAGATTGTGTATGAGAA
CCGGCTTCTTGTGAAGAATTTCGCTCATCTATCGTGACATTCGACGAGTCACGCAAATAGACATCTCGTGGGCATCTCGC
GTCTACGCGAATTTTACGTGAAGCATCGTTCGTGTACGCAGCGTCGTAAGAAACATTCGACCGCAGGTTCTCGCACGAGC
CGCAAAATGCCGGGTTTTAGCAGTGTTGGCACATTTAAGATCTTCATTGGTAATTTAGCTGACAAAACTTCGAACGCTGA
CATCAAGCCATTGTTTGAGAAATATGGCAAAGTCGTGGAATGCGACGTGGTAAAGAATTATGGCTTTGTGCATATGGAAA
ATGAGGAAGCAGGTCGGAACGCTATACAGAATTTGAATGGTCATATGGTTCATGGGCAACCAATAAAATGTGAGGCAGCG
AAGAGTCGCAAGGGACCTAACACTCCCACGACGAAAATCTTCGTTGGTAATCTCACAGACAACACGAAGGCACCGCAAGT
GCGCGAGTTGTTTGCCAAGTATGGTACGGTCGTTGAGTGCGACATTGTTAGAAACTACGGTTTCGTTCATCTGGAAGCAA
CGGGGGACGTGAATGATGCTATCAAGGAGCTGAATGGACAAATCGTCGATGGACAGCCGATGAAGGTCCAGATTTCTACC
AGTAGGGTGAGGCAGAGGCCAGGGATGGGAGATCCGGAACAATGCTACCGATGCGGACGAGGCGGTCACTGGTCCAAGGA
GTGTCCCAAGGGTGGAATGGGAGGTGGACCGGATAGGAACGGATATAGAGACCGAATGTTTGGACGTGATCCCTATCCTC
CACCACCGCCACCACCTTTCCTTCGGGACCGGCTCATGGGTGGTGGCCGCTTCGGGGACTACGAAAGCTACTACGACAGG
CGAGGCTTCGAGGACACCAGGGATCTCTACGAGAGGCGGTTTACGGGTATGACAGGGCCCTGTGACATGGGAAGTTCCAT
GTGCGGGCTAGACTTTCCACCAATGACAATGCCACCCCCAAGACGAGACCCAATGCCTCCTATGCCTCCTCTAGGTATGG
GATCCATGCGCGACACTGGCTTCTCCCGTGGTAACGAGTATGGAATGTTCAGCCGCCGATCCCCCCCTCCTAGTGGCAAC
AACGGCCGGTTCAGTGCACCTCAGGCGTACCATCTTTGTCCATGAACGCGGGCAACCCTAGAGAGACAGTCCCGGGTCAG
CGTTCAAGTCGTACAAGAACCGGGATTACGAGGGCCATCGCCGGCGCGCCGGTTCGCACCGTACTAAATCGTCGCGTCGG
GCTCGGATCGGTCTCTGTCGGTCGTCGGTCCGTCGGGTCTGTCTGTCGCTAGCAGGAAGCCTCGGAACCGAGATACTCTT
GGCCGTCTTGCGAACTGCACGCGCGAAGATCTGCCGCCCGCTCTATGAGAACAAGTGCTACCCGCAGTGCGATCTGTTTA
GACGAAAAAAAACGGATACAAAAGTAGAGCAAAACACACAGACGAAATACAGCCAGCCAAAAGTAGCAGAGACACGCAAA
AAAGAAAAAAAAAACAGAACTTCTGAGAATTATCACCTGTCGCACGACGAATCCCTCTTCATGGACTCCCATTTATCGAT
CCTATCGTACCTTACGTTACCCGGTCTCATTGCATTCGCCCGCACCCCTCTGTGTCATATATTTGTATAAAATCAAAGTT
AGAGTATCCTCGACATTAAGAATTCGATGGGGCTCCACCGCGACGACTCCTCGATCCTTCGATCAACAATTTTTTTCAAC
AGACATTTTTTAACGAAAAATTTTCCCATCGTCCTTTTGAAGGCTTCGAACCTTGTAACGTCAATTTGCGTGATTGATTT
GTCGCAAATTCCGAAAATGCGGGATCGACGAGCGTTTCGATGGGGCCGGTATTTTGCGGCGACGCGAAAGCAACCAATAT
TTTCAAATACGTATTTTCTGTAACAATTGTCGTATCATCCCTGGCCTTCTCTCCGTTGCGCAACAATCGATAGACTCGTG
TCGCGCGCGTACGCGTCGCACACCGCCGAGTGTTTCTGGATGAATAACAAACGATGAGTACGGCGTAATTCAACACTCCG
CTTGTTTGTGTGATATCGCCGCGCACGATTGCGTCGCACGTGAACACGATCTCCGCGCCGCTAGACCAAATACATTCAGA
TCGAAAAAAAAATAAGTAGCGCTCGCCGAATTCCCGTCGATCTTATATCTTATTTATATGTCATATGAGTGTAAGACCTT
CCATCGCAATAGCGCAATACTTTGATTAACGATCTAAATGTTGCAAACAAAATGCGGATAAATTGTACTAGGGACTATTT
GTACTTCGTCGTCACGCATCTTGATCGTAACTCTTTTTCTCTTATTTTATTAATCAAGTAGATCTATTAGCGGGAATCGC
GGATTCTAAAAACTTGTGAAAGGGAGGAACCCTCCGAGCGAGTAACTTGATACTTTCGAAAAATCAAGCGGGAGCAGGCC
TCGTCCTCCGAGACGGTCAAATCTATGTCGCTCCGACAACAAATATTCCATTATTTTTAACGAATAATTTTGTATAGAGA
CGCAAATTAGATATCTTAAGTTTTTAACATACTCGCGAGGGAATATCGAAAAGTTGTAAGTCGTGCTTTAAACAAAACAT
TTGAGATTTTCCCCCTCCCCAAATGGGGCGGTAAGCGTGTAGATTCGACCATTTAGAAAATCTGTTTCCATATTTGCTGT
TTCAAAACTGAAGTTGAAAAAGATGATAATTAAAAACTTGGACCCGCCGTAGGATGCGCCGATTCTGTATGGAAAAACCT
AAGCTGAACATTATCGTTAGCATATAGTAACGTAATCATTTTATTAACGTAGGATTAACTCTGACATAAAGAAAAAGACG
GTGTTGTAGTTTGTAATAATCGCACTTTCGTTATTATTTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTGAGCGTAGACAC
TGTAAGCCTTTTTTTCTTGTATTATCCTCTCTACGCCTTTTCTTTTTTGCTGTGAACGACCGTGTTTTTTTTCAGAATTA
TATAAATTATAACCATGATAAGATTAATAATGCTGAATATAAAAG
PEP:
>LH22860-PA
MPGFSSVGTFKIFIGNLADKTSNADIKPLFEKYGKVVECDVVKNYGFVHMENEEAGRNAIQNLNGHMVHGQPIKCEAAKS
RKGPNTPTTKIFVGNLTDNTKAPQVRELFAKYGTVVECDIVRNYGFVHLEATGDVNDAIKELNGQIVDGQPMKVQISTSR
VRQRPGMGDPEQCYRCGRGGHWSKECPKGGMGGGPDRNGYRDRMFGRDPYPPPPPPPFLRDRLMGGGRFGDYESYYDRRG
FEDTRDLYERRFTGMTGPCDMGSSMCGLDFPPMTMPPPRRDPMPPMPPLGMGSMRDTGFSRGNEYGMFSRRSPPPSGNNG
RFSAPQAYHLCP
Swiss-ProtRNA-binding protein lark
KEGG     K13187     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:4.10.60.10     
PfamPF00076  RRM_1; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00360     
ProSiteProfilesPS50158  ZF_CCHC; Zinc finger CCHC-type profile.     

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