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Gene detail [Fasta]

Species Linepithema humile
GeneLH24198
Positionscf7180001005073:1304513..1309839[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24198
sequence mRNA: 
>LH24198-RA
ATGTCGGAAATAATATACCCTGCAGGATGCAGGTCAGTCACCGAAGATTTAGGTGCAGATGAGCTAATCAGAAGACTTAA
GACACTAGCACACACACTGCAAGCCATGGGACAAGATGAGGGAATGTACCAGCAATATATTCCACTTGCGTTACACTTGG
CAGAAGAGCACTTTCTGATGCATCAGAGCAAAGATGTACAATTATTAATTGCCTGCTGTATTGCAGATGTCTTAAGGGTT
TATGCACCAGAGGCTCCTTATAAAGATGCTGAACAGGTCAAAACAATATTCCTATTTTTGATTAAACAACTGGCAGGATT
AAAAGATCCTAAAGATCCTGCTTTTAAGAGGTACTTCTACCTACTTGAAAATTTAGCTTATGTTAAGTCATTTAATATGT
GCTTTGAGTTGGAGGATTGTCAAGAGATTTTCTGCGCATTATTTTCCCTAATGTTCAAAATAGTGAATGATGAACATTCT
GGCAAAGTTAAAAGTTTTATGTTGGACGTTCTCTGTCCACTGATTACCGAATCGGACATTGTCAGCAATGAACTTTTGGA
TATCATACTCATGAATATTGTAGAGCCAAACAAAACACAAAAGAAAAACGCATATTTGCTTGCTAAAGAGCTAGTGATTA
AATGTAGCGACACATTAGAACCATATATTCAAGCATTCTTCAATCATGTCTTAATACTAGGAAAAGAGGAGAAAAGTTTA
CAAATTTGCAAGAAAGTGTATGATTTAATTTACGAATTGAATCACATATGTCCGAGTGTCTTGCTGTCCGTCCTTCCACA
GTTAGAATGCAAATTGAAATCTTCCTCCGAGACTGAAAGATTGGGCGCTGTAGCATTGCTAGCGAGAATGTTCTCTGAGA
AAGGTTCGCAGTTGGCCGTGCAGCACACGCAGTTGTGGAGGGCGTTCCTGGGACGATTCAACGATATTAGCGTTTCCATT
CGTATTAAATGTGTGCAGTATTCGATGCATTTCTTGTTGAATCATCCCGAACTGAGGAAAGATATCACAGACACTTTGAA
GTTAAGACAACACGATGCTGATGAGAGCGTTCGCTACGAAGTCGTTACAGCTATAGTGACAACAGCCAAACGAGATTTTG
AAGTCGTATCAGATAGTGAGGACTTACTTGAATTTGTCAAAGAAAGAACATTGGACAAGAAATTTAAAATACGAAAAGAA
GCGATGTCTGGCTTAGCTATGATATACAAGAAACACTTGAACGATGCGGATGTGCCGCAAGCCACAAAGAAGGCAGTCAT
CTGGATAAAAGATAAAATATTGCATGGTTATTACATGGCAGGCATGGAAGACAGGCTGTTGGTGGAGAGACTGCTAAATA
CGTGCTTAGTACCTTATCAGCTACCAGCTGAAGAGAGAATGAAAAAGTTATACCACCTTTTAGGTACAATTGATGATCAC
GCTTCCAAAGCTTTCGTGGAACTTCAGAAGCATCAGCTTGCCGTGCGAAGAGCAGTGGTTGAATGGATAGAAATTGTGAA
GAAACCGGATGCTAAGAACGAACTGGTGACGAAGATTCATCAAATATCGCGTTTTCTACCCGATCCTATGAAAGTGCAGG
AATTCCTCCAAAAGTTTAGCTCTCATATGAGGAAGGAGGCGAAATTACTGCAAGAGATGGAAACCATCGTACAACCGAAT
GTGTCCTGCAAGGAATGTGCAGACACGATAACTAAAGTTCTCAAAAGATTAGGACAACCCGTCATGACTAATCTATACTA
TAATACGATTAAGATGTTGCTTGAGAGAGTAAGCTCTGTTATGATTGATGAGGAGGCGATTAGGGTTTTGATTGGATACG
TCTTAGACTGTTTAAAGAGTGGTAACGTGATAGAAGAGGTCGGCCTTAACCCGAATAATGCCGGAGAAAAGGGACTGAGA
CTATTAGTGATGCTATCGTTTGTGTTTGGCCCGCATTTCTTGCATAATGATATCTTGATGCAATTGGTCAATCTGCTCGA
GTTAGAGGACGAAATGGTGGCACCATTAGTTCTCTCCATCTTCACTTTCCTAGGCAAATACAAACCTTTGTGCGACGTTG
CACCAGAAATAATGAATCTTATGGTGCCGATATGCAAAAATTTTGCCGAGACGGGAACGCCGAAGCAGGCAAAACAGGCC
GTGAGATGTTTATTTGTTAACATGACCAACATTCACGACACCATATTCCCCGAGATCATAGAGAGAATTAAGAACACGCT
GACGCCGACGTCGGAATATTATCGGACATCTATAGTCACATTAGGTCACATAGCATATAATTTGCCAGACAAATATCCAG
TACAAATAAAAAATATGGTATCCAGAAAAATAGTTAAAGAATTACTAGTGAAGGAAAGCAGCGAGCAAAATGAGCCTATC
GAGGGAGACTGGTGCAGGGAGGATCAATTACCGGAGGAGACGCGATGCAGATTGGAAGGCTTGAAGTGCATGGCACGCTG
GCTGTTGGGATTGAAGACTGATGTGTTGTCGGCGCAAAAGACATTCAGGATGCTGAACGCCTTTATGGTTAACAAAGGTG
ATCTGCTGTCGCAAGGACGTCTGAGTAAAGCTGAGATGAGTTGGTTGCGACTACAAGCGGGTTGCTCAATGTTGAAGATA
TGCGAACAGAAAGGCGTCGGCGATCAATTTACTGCGGAACAATTTTATAATCTTTCACAACTTATGGTGGATGAAGTTCC
TCAAGTCAGAGAAGCTTTTGGCAGCAAGCTGCATAAAGGTCTTGGGAGAGGAATTCCAAACAAATGTTTACCATTGGATT
TCATGGGATATTACGCTCTGGCTGGAAAGGAACAAGATAAAAGATTAAAATGTGTGCTAAAAACATATATGCAGACAGAC
ATAAATAAGAGAAGGGATTATGTAAAGACTCTTTCGTTGGGTACAGTCGAGCGAGCTATGGGTCAACTACCCCACATTTT
ACCGGATTACATGCTAGTTTTCGCAGTACCTATTCTCGCACATGATCCCGAATTTACGAGTCACCTAACGGTGAGTCAGT
TAAAAGTCATTCAGCAGTGTCTTTGGTTCATTTTGGAGCCTCTTATCACGAAGAACGAATATTACTGTTATGGATTTTAT
AAAAATCTTGTGGAGCGTATGAAGAGTCATAAAGACGCATTGAAGCCTGAGGACAACGAAATGAATTATAAACTGTGGGC
TGTTTGTGATTTGGCGATGAATGTAATATACACAAAAACTACCAATTTTGACATGAAAGAGTTTCCGAGCGAGACGCGAA
TTCCGACGATGTACTTCAAGCGGGCGGACGAAACGATGTCCAACATTAAGAATTATTTACCATCGGAACTGCAGATAAAC
ATGACGACACAAAAAGGAAAAGGATTCCACAACACACACACGACCAATGAAAGACCACAGCGCAGAGCTAAGTCCAAACA
GCAGAAGGAAGTGGGCATTGGACCTAATGAAACTGATGCAAGACCTGCCGAAGCATCAGAGACCAGAATTCAACTACCTG
GGTTGGAAGAAGAAATCGAGGAACCACCAGCGAAGAGGGCATTAAAGGAATCGGATAAAGTAAATAAATAATTCAGTGAT
CGGACTATACCCAAAGGGACATTGGGATGGGGAAAGACTTAAAGCACATGATGATAAGCAAATTAAAGGAT
PEP: 
>LH24198-PA
MSEIIYPAGCRSVTEDLGADELIRRLKTLAHTLQAMGQDEGMYQQYIPLALHLAEEHFLMHQSKDVQLLIACCIADVLRV
YAPEAPYKDAEQVKTIFLFLIKQLAGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDCQEIFCALFSLMFKIVNDEHS
GKVKSFMLDVLCPLITESDIVSNELLDIILMNIVEPNKTQKKNAYLLAKELVIKCSDTLEPYIQAFFNHVLILGKEEKSL
QICKKVYDLIYELNHICPSVLLSVLPQLECKLKSSSETERLGAVALLARMFSEKGSQLAVQHTQLWRAFLGRFNDISVSI
RIKCVQYSMHFLLNHPELRKDITDTLKLRQHDADESVRYEVVTAIVTTAKRDFEVVSDSEDLLEFVKERTLDKKFKIRKE
AMSGLAMIYKKHLNDADVPQATKKAVIWIKDKILHGYYMAGMEDRLLVERLLNTCLVPYQLPAEERMKKLYHLLGTIDDH
ASKAFVELQKHQLAVRRAVVEWIEIVKKPDAKNELVTKIHQISRFLPDPMKVQEFLQKFSSHMRKEAKLLQEMETIVQPN
VSCKECADTITKVLKRLGQPVMTNLYYNTIKMLLERVSSVMIDEEAIRVLIGYVLDCLKSGNVIEEVGLNPNNAGEKGLR
LLVMLSFVFGPHFLHNDILMQLVNLLELEDEMVAPLVLSIFTFLGKYKPLCDVAPEIMNLMVPICKNFAETGTPKQAKQA
VRCLFVNMTNIHDTIFPEIIERIKNTLTPTSEYYRTSIVTLGHIAYNLPDKYPVQIKNMVSRKIVKELLVKESSEQNEPI
EGDWCREDQLPEETRCRLEGLKCMARWLLGLKTDVLSAQKTFRMLNAFMVNKGDLLSQGRLSKAEMSWLRLQAGCSMLKI
CEQKGVGDQFTAEQFYNLSQLMVDEVPQVREAFGSKLHKGLGRGIPNKCLPLDFMGYYALAGKEQDKRLKCVLKTYMQTD
INKRRDYVKTLSLGTVERAMGQLPHILPDYMLVFAVPILAHDPEFTSHLTVSQLKVIQQCLWFILEPLITKNEYYCYGFY
KNLVERMKSHKDALKPEDNEMNYKLWAVCDLAMNVIYTKTTNFDMKEFPSETRIPTMYFKRADETMSNIKNYLPSELQIN
MTTQKGKGFHNTHTTNERPQRRAKSKQQKEVGIGPNETDARPAEASETRIQLPGLEEEIEEPPAKRALKESDKVNK
Swiss-ProtSister chromatid cohesion protein PDS5 homolog B
KEGG     K11267     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
OrthologiGroup-00909    Sister chromatid cohesion protein PDS5 homolog B-B      

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