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Gene detail [Fasta]

Species Linepithema humile
GeneLH14273
Positionscf7180001004757:881564..896410[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14273
sequence mRNA: 
>LH14273-RA
ATGGCCGTATTAATCTGTCTAATGGATAGCTACTCGGACAAGCAGCAAGCATTCGGACCCGACGTGTTAATTGAATATGC
ACAAAGTATAGCTATGATCGATTTGCACATCGTGAGCTTCGTATTAGAAAAGTTAGATATACTGGATACAGATTGTGGCA
CAGATCCTTCGGGTAAAGTGCTGAGCGAGGAGAGGGAGCTCCGACTGAACGAGGCGAGCTTCGAACGTGCGGCCGCGCTA
CTCCGGCGGGTTCCGGAATTCACTATAGCCGCCGCGCTGCGCCAGGAGGAGGCCAATTCCGGGACGATCGTCGCCTTTTC
GCACGGGAACAATAGGTACTTGGAGCTGCAGAGCAGCGGTCGCAAGGACGAGCTTCGACTTCATTACGTATCACGCCGCG
ACGGAACCGTACACGTCGAGGCGTTTCCTTTTCGACTAGCCGACGGCGCCTGGCACAGGGTCGCCCTGAGCATAAGCGGC
TCGCAGGTCGAGCTGCTGGTCGATTGTCACCCCTTGTACAGGCGATTACTAAGGCCTGGTCCACCCGACACCAATTTCAC
TCTACCGCAACTGCAGCTCTGGGTCGGACAGCGGAACGTCAGGCACTTTCTCTTCAAGGGTGCTTTGCAGGACGTCAAGC
TAATAGCAGGACCTCACGGTTATCTTTCCCAGTGTCCTCAGCTCGATTCGTCCTGCCCCACATGCGGCCAATTTTCAATA
TTACAGAATACCGTGGAACAACTAATGCACAATCTTAATGAATTGACTCGTAGGCTAGCCGCTGCAGAGGGCAGGATAAG
CAAAGTGGAGGAATGCGAGCGCCAAAAGTCCTGTAGGGTGAACGGTACCGTCCACGACGACGGCGCGACTTGGGAGAAAG
GTTGCCAGCAATGTTCCTGCGTTCACGGCGAGATCGAGTGCAGAAAGACGCCCTGCGCTACGGTCACCTGCAAGTATCCC
ACCACTCCCGAGGGACAGTGTTGCCCGATTTGTCTCAGACAATGTTACTTGCGCGGCGTAATTTACGATCACGGCGAGAA
GGTATCGCCGAAACAGTGCGTCGAATGCAGCTGCTCCGACGGTAGCTTCACCTGCCAGAGATTCGACACCAATACAAAAT
GCCCACCACTGCCGTGTCCACCCAGCGAGCAAATCAGCGTGGCAGAGGAGTGCTGCAAATTTTGCCCAGGGGTGGACTAC
TGCGCGAAGGGCCACAAGTGTCACGCTAACGCGTCCTGTCTGAACCTCCAGACGACCTACGCCTGCCATTGCGAGAACGG
TTTCCAAGGGGATGGTCTTAACTGTCACGATGTCGACGAGTGCAAGCAGCAAGGTGGATCGGACGGTCATCATTGCAACG
CGAACACGAGGTGCGTCAACGTGATCGGCTCTTATACGTGCGAGTGTCTTCCGGGTTACCATAGAGTCGACAAGTTCAAC
TGTGCCGAGCTGGACGAATGCGCGACTGGTCATCACCAGTGCGACAAGCATGCCACATGCGTGAACACTGCCGGCAGCTA
CTACTGCATCTGCAAGGACGGCTATACCGGCGATGCTGTGTGCAATCAGACTTGCCAGAATGGCGGCGAGTGCGTGGCGC
CCGGAAGGTGTTCCTGTCGACGCGGTTACATCGGCAATAGCTGCGAGCTCGACCTAGACGAGTGCGCCAGCGACCTGCAC
CGGTGTCACCAGTCGTCGACGTGTTTCAACATGCCCGGCTGGTATTATTGCCGGTGCAAGCCCGGCTACAGGAGCGCCCT
GCATGACAGCACTCAGGGCACGCAGTGCCTCGACATCGACGAGTGCAACGACCTGACGATCGAAAGGCGGCACACGTGTC
ACCCTACCGCGAAATGCGTCAACACCGAGGGCGGCTACGAGTGCGTGTGCCCGCCGGCGAAGGACCTAGAAGAGTCCGGG
GAAGAATGCAGACTCAGCTGCTGGTTCGAGGGCCGCGAAGTCAACAATGGCGAAACTTTGGCGCCGGCCGGTAATCCTTG
CAGGAGATGTACCTGCCAAGACGGCGTGATCACTTGCAAGGACCCCGTGTGCGACTGCAGCGCGCCGGGAAGCCAAAGGG
ACAAGTGTTGTCCGCAGTGCGACCCTGCGGCGTCCTGCAGACATCAGGAGCTTCATCATCTAGTTTTCAGAAGTGGAGAT
CGTTGGATATACCAGTGTCAGACTTGCGAGTGCCTGTACGGCGAAATAGACTGCTGGCAGATGGAGTGTCCACCGGTGAC
CTGCTCGAATCCCGTGACCGAAGAGGGCGATTGTTGCCCGCGCTGCGAGGACGATCCCTGCGCTCGAGAGGTGCCGGCGA
ACGGCACCTCGTTCACGGTTCCTAGTCGTCCCCGGCCGTGCAGCTACGCCGGCATCGTCCACGACAGCGGCAGCTCCTGG
CAGGACCCCTACGACAAGTGCACCACGTGCGAGTGCAAGGACCCGCAATCGCCGGTCCTTGACCCGTGCGAGATCCGAAG
GATACAGAATAGGATAAGGGGGGGTTCGTCGGAAAAGGACGGCGCCATGGGTACAGAAGAAGACGGGCAGCTTTGCTGCA
GCTACGATTACGGCTGCGCTGGCGATCTGGGCGACGACAAGCAGCAACGTCCTCCAGTCGCTGTTCCTGAGCCTCTCGTA
CGCCATCCACCGGACCTTGCGGTCCAATCGCTGGTCAACGGTGCACAGGAAGCAGCTCTACCAACGGTCACCGGCACACC
CGGCACTACGCGCACCATCACCACCGCCGTCACCACCTTCGTTGCGAGCACCATTTCCCCCGTCTCGTCGCCCACGCACT
ACTCGTCATCCTCCAGCATCAGCGACGACAGCGGCTCCTATGATCTCAGGCAAGGTCACGCAGCAGACTCGTACACCTCG
TCCGTGTCGCGAGCTCAGCAGAGAAACGCCTACCATGCCATCAGGTCGCAACAACAGCAGCAGCAGCAACAAGCGTCGTC
AACCACGAGACACCAACAGTTCGTCGGAAGCTCGACAACGTCGTCGACGGCGTCGGAGCAATCCGCGGCGCCGTCGGCGA
CGACGACGAGGACGCCGTCCGTGACGTCTAGCAACGGCGGCTCGACGTCGTCGCGACACAGCCAATCGACGAGCACCGTC
GGTCGCCGTGATGGTGCCGCCATCGCCTCGTCCTCTTTCTCGTCGTCGTCGTCGTCGTCGTCATCGCCCACTCTCGCGAT
GGTCCTGGCCACCTCAACGGTCGAGGAGCCCGGACGATCGTCCGCGAGCGTCACCGCGCAAATCCACCAGCTGGTCGGTC
GCCGTCACAAGGACAGCAGGAGGTCCATTATCCTCGACAGCGCCACTTGA
PEP: 
>LH14273-PA
MAVLICLMDSYSDKQQAFGPDVLIEYAQSIAMIDLHIVSFVLEKLDILDTDCGTDPSGKVLSEERELRLNEASFERAAAL
LRRVPEFTIAAALRQEEANSGTIVAFSHGNNRYLELQSSGRKDELRLHYVSRRDGTVHVEAFPFRLADGAWHRVALSISG
SQVELLVDCHPLYRRLLRPGPPDTNFTLPQLQLWVGQRNVRHFLFKGALQDVKLIAGPHGYLSQCPQLDSSCPTCGQFSI
LQNTVEQLMHNLNELTRRLAAAEGRISKVEECERQKSCRVNGTVHDDGATWEKGCQQCSCVHGEIECRKTPCATVTCKYP
TTPEGQCCPICLRQCYLRGVIYDHGEKVSPKQCVECSCSDGSFTCQRFDTNTKCPPLPCPPSEQISVAEECCKFCPGVDY
CAKGHKCHANASCLNLQTTYACHCENGFQGDGLNCHDVDECKQQGGSDGHHCNANTRCVNVIGSYTCECLPGYHRVDKFN
CAELDECATGHHQCDKHATCVNTAGSYYCICKDGYTGDAVCNQTCQNGGECVAPGRCSCRRGYIGNSCELDLDECASDLH
RCHQSSTCFNMPGWYYCRCKPGYRSALHDSTQGTQCLDIDECNDLTIERRHTCHPTAKCVNTEGGYECVCPPAKDLEESG
EECRLSCWFEGREVNNGETLAPAGNPCRRCTCQDGVITCKDPVCDCSAPGSQRDKCCPQCDPAASCRHQELHHLVFRSGD
RWIYQCQTCECLYGEIDCWQMECPPVTCSNPVTEEGDCCPRCEDDPCAREVPANGTSFTVPSRPRPCSYAGIVHDSGSSW
QDPYDKCTTCECKDPQSPVLDPCEIRRIQNRIRGGSSEKDGAMGTEEDGQLCCSYDYGCAGDLGDDKQQRPPVAVPEPLV
RHPPDLAVQSLVNGAQEAALPTVTGTPGTTRTITTAVTTFVASTISPVSSPTHYSSSSSISDDSGSYDLRQGHAADSYTS
SVSRAQQRNAYHAIRSQQQQQQQQASSTTRHQQFVGSSTTSSTASEQSAAPSATTTRTPSVTSSNGGSTSSRHSQSTSTV
GRRDGAAIASSSFSSSSSSSSSPTLAMVLATSTVEEPGRSSASVTAQIHQLVGRRHKDSRRSIILDSAT
Swiss-ProtProtein kinase C-binding protein NELL1
SUPERFAMILYSSF57196  EGF/Laminin superfamily     
Gene3DG3DSA:2.60.120.200     
PfamPF13385  Laminin_G_3; Concanavalin A-like lectin/glucanases superfamily     
SMARTSM00179     
ProSiteProfilesPS50026  EGF_3; EGF-like domain profile.     
CoilsCoil
ProSitePatternsPS00022  EGF_1; EGF-like domain signature 1.     

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