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Gene detail [Fasta]

Species Linepithema humile
GeneLH14261
Positionscf7180001004757:573704..577177[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14261
sequence mRNA:
>LH14261-RA
ATGTCAGAGATTACAAATGAACCAGCAACAAGCGAGAAAGAAGCAGTTGCTGAAGACCCGAATGCCGTCTCTGAAGAAGA
TAGGCAATACTTGACAGAGTATGTGCGGGAAACAGAACAAAGATTGGCAACAAAGGAGGAGATTCGTGCAGCTAATTTAA
ATCCTACAAGACCTCCAGATGCATCATTCAGTAAGCTGGATTCGAGCCTCAAGAGAAACACTACGTTTGTGAAGAAATTG
AGAACCTTTGGCGTAACTCAACTCGACACTGTTCTAAAGGATATGGCAAATTTAAACCTGACAAAATATGTAAGCGAAGT
TGCTACAGCTCTGGTAGATGCCAAAATAAAGATGACCGATATTGCGCCTGCCATTAGAGTATGTAGTTTCCTTCATCAAA
CATATGCCGAATTTTCCACTCATTTCTTCGAAAACTGGCAAAGAACATTGTCATTAAAGATTGGTGACAAGATTGCTAAT
CCTAGCAAATTAAGAGTGGATCTTCGATTCTATGCGGAACTTGTTAATGCTGGAATATTTACACACAAACAAGGTTTGCC
ATTATTGGGATCAATATTAACTGTATTGATTAATATGGACAAAGAGGAGCACAATAATGCTAGCATAATACTGAGTTTTT
GTCGGCATTGTGGCGAGGATTATGCAGGTCTTGTGCCTAAAAAAGTACGTGAATTATCTGAGAAACTAAATATTTCAATT
CCTAAAAGTAAACTATTGTCACCGGACAAGCAACAAAATGTCAAATTACTGCTGCGAGAATACTATAACTCTCTATGCAA
GCACTTGCTGAAGGAGCATAAAGAATTACAAGCCTTTGAGAAGCAGAATCGCAAGATATTGCAGACTAGAGGCGAATTGA
GTTCAGAGAGAAAGGAAAAATTGGAAGCACTCCAATCATCTTACAAGCATTTGCTAACTAGTGTGCAAAGCTTCTCTGAC
ACATTGGATGAGCCAATGCCTGAACTTCCCGTGGATACCGAAGTAAAGACAGAGACGGAAGAAACGTTGAAAATGATTAA
CGAAGGAGAGGACAGTGCTCTGTTGGAGGATATGTGGGGAGACGAAGAGACGAGACGCTTCTATGAGCTACTACCAGATC
TAACTGTCTTTCTTCCAGGCTCATACTTGAAGGAAACTCCGAAGGAAACACCAAAGACGGATGCACCGATAACGGAAGAC
GCTCTCGACGAGGAAATAGTCTTAGACGAATTGGAAGATCCTGAAAAGACAGAAGAACCATCGGAACCGGAAGTGGAGGA
GCCGCAGGTGTCTAACACCAGCAACAAAATATTGCTAGACGCCTTCTTGACGCACTTGCCAAACTGCGTGAATCGCGAGA
TGATTGATAATGCCGCAGTAAATTTTCTGATAAATCTCAATACGAAACACAACAAAAAGAAGCTGGTGAAGGCACTTTTC
GGCGTTTCCAGAATCCGGCAGGATTTGCTACCTTTTTATTCTCGTTTGGCAGCTATCCTCTATCAAGTAATGCCTGAAAT
CGGCAATGACCTGTGTCAAATGTTGAAGCAGGATTTTAAATATCACGTGCGGAAGAAGGATCAGATTAACATTGAGTCGA
AGATCAAGGTAGTTCGCTACATTGGCGAACTTGTCAAATTCAAGCTCTACTCCAAGATAGAAGCGCTCTATTGCTTGAAG
GTATTACTGCATGATTTTACGCACCATCACATTGAAATGGCTTGTAATTTGCTGGAAATTTGCGGCCGATATCTATTCTG
TTCGCCGGATTCTCATCAGAGAACCAAGGTCTATTTGGAGCAGATGATGCGTAAAAAAGCGGTCACGGCACTCGATTCAC
GCTATGTCACAATCATCGAGAACGCTTACTATTTCGTGAATCCGCCCGAATCGACCGGCGGCGTCGCAAAGAAGGACAGA
CCGCCTGTGCACGAATTTATAAGGAAATTACTGTATCAGGATCTTTCGAAAACAAATACAGACAAAGTGCTCAAATGGAT
GCGTAAACTTGATTGGGAGGACGAAAGCTTGTCATCCTACGCCATAAAATGCCTCACTGCCGCTTATAACGTTAAGTATC
CTAACATTCGCTGCGTAGGTAGCTTGCTGGCCGGCCTAGTGGCTCATTACGAGACCATTGGTCCCCAAGTGGTCGACGGT
GTGCTCGAGGACATAAGATTGTGCATGGAGATTAATCTGCCCAAGTACAACCAACGACGTATCGCCATGGTGAAATACTT
GGGTGAACTGTACAACTATCGAATGGTGGAGAGCGGCGACATCTTTCGCACCTTGTATCTTCTGATTACCTTTGGCGTCA
GCGTGGACCACTCATCTCCGAGTATACTCGATCCGTCTGATCATCTTTTCCGTATTCGACTAGTGTGCACGCTATTGGAA
ACTTGTGGCCAGTACTTCAGCGGCGGCTCCAGCAAGAAGAAGCTCGATTACTTTCTTGTATTCTTTCAGAATTATTTCTG
GTTCAAGTATACGGATCCGGTATGGACAACCGAGAGTCCATTCCCAGTCGGAATAGATTATATGTATCGCGACACGTTAA
CGATGCTACGACCAAAAATGCAATTGTTCCAGAGCTACAAGGAGGCGCAGTGCGCCGTAGAAGAATTGCGGAACACTCTT
TATCCGACCTTAAACGATCCTTCCGTTAACGATACTGCTGCAGAAGGCGAAAATGATATGAGCGTTATTTTGGAGGCCGA
CGAGGAAGCGGCGGTGACCGGGAACGGTAGCGGAGACGCGAAGGGCATAGCCGAGTTGCATTTCGAAGAGTCCGAGGATT
GTTCAGAGGCGCAATCGGAGGAGGAATGGACGGCCGATGCGGAACGGGACGACGCCATGGGCACGCAAGAGAACACTCAA
GGCGATCGGTCTCAGAGCCTATCGGCGGAAGGTGGTAACGAAGGCGTGATCATGGACGTGACAGAGGAGCTGAACGCGGC
TTTGCCAGCTGGACCGCGACGCGTAAGCTGTCCAGAAGATGACGACTTTTTATCAGCATTGGACAAAATGGTGTCTGACA
ACATACAGGATCGTATGCGGGATTCCGTGAAGCCACAACAAGTGGACATCTCTGTACCGCTGCACGTGAAGAGCACCAAA
AAAACATACGAGCAATTGCAGGAGAGACCGAGCGACAACAGTACAGTGGACTTTGTATTAATGTTGAGAAAGGGTAATAA
ACAGCAATACAAGAACCTGGCGGTGCCCGTGTCTTCTGAACTAGCCATGAATCTTAGAAATCGCGAGCAAGAGCAAAAAG
AGGAAAAAGAACGCGTTAAGAGACTGACCTTAAATATTACCGAGAGACAGGAGGAAGAAGATTATCAAGAAACTATAAAT
CAGAGCACGAGACCAGTCACGGTAAATCTGAACAGAGAACGGCGGCAAAAGTATAATCATCCGAAAGGAGCACCAGATGC
TGATCTCATTTTTGGACCGAAGAAAATTCGATAA
PEP:
>LH14261-PA
MSEITNEPATSEKEAVAEDPNAVSEEDRQYLTEYVRETEQRLATKEEIRAANLNPTRPPDASFSKLDSSLKRNTTFVKKL
RTFGVTQLDTVLKDMANLNLTKYVSEVATALVDAKIKMTDIAPAIRVCSFLHQTYAEFSTHFFENWQRTLSLKIGDKIAN
PSKLRVDLRFYAELVNAGIFTHKQGLPLLGSILTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNISI
PKSKLLSPDKQQNVKLLLREYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSSERKEKLEALQSSYKHLLTSVQSFSD
TLDEPMPELPVDTEVKTETEETLKMINEGEDSALLEDMWGDEETRRFYELLPDLTVFLPGSYLKETPKETPKTDAPITED
ALDEEIVLDELEDPEKTEEPSEPEVEEPQVSNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLINLNTKHNKKKLVKALF
GVSRIRQDLLPFYSRLAAILYQVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRYIGELVKFKLYSKIEALYCLK
VLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLEQMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVAKKDR
PPVHEFIRKLLYQDLSKTNTDKVLKWMRKLDWEDESLSSYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDG
VLEDIRLCMEINLPKYNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSSPSILDPSDHLFRIRLVCTLLE
TCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPVWTTESPFPVGIDYMYRDTLTMLRPKMQLFQSYKEAQCAVEELRNTL
YPTLNDPSVNDTAAEGENDMSVILEADEEAAVTGNGSGDAKGIAELHFEESEDCSEAQSEEEWTADAERDDAMGTQENTQ
GDRSQSLSAEGGNEGVIMDVTEELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSVKPQQVDISVPLHVKSTK
KTYEQLQERPSDNSTVDFVLMLRKGNKQQYKNLAVPVSSELAMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETIN
QSTRPVTVNLNRERRQKYNHPKGAPDADLIFGPKKIR
Swiss-ProtRegulator of nonsense transcripts 2
KEGG     K14327  UPF2, RENT2; regulator of nonsense transcripts 2     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.40.180     
PfamPF04050  Upf2; Up-frameshift suppressor 2      
SMARTSM00543     
CoilsCoil
OrthologiGroup-00702    Regulator of nonsense transcripts     

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