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Gene detail [Fasta]

Species Linepithema humile
GeneLH21744
Positionscf7180001005013:5706..15931[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21744
sequence mRNA:
>LH21744-RA
ATGGCGAGTGCAGAATCACTTGCAGAAGTAACAGATGTTGTACAAATTCTTCGACAATGGGAAGAAGAACACAGTTCACC
AACCTACGATCCTATTCCTGTACTACAAAGATTAGCAGACATAATAGAACTGGAAACGGAGAATTACATGAAGATGGATC
CAGATCCATTTGATGAGAGACATCCCTCGCGTACTGATCCAGAATGTAATTTTGGACATATATTGAAGGTTTTATTCAGA
AAAGATAACTTTATGACAAAGTTAATAAATGATTATTTGAGGGATACATATTGGTCTCGAGCAGGGGTGACTGGAAGGGA
TGTTAGAAAGCTGAATATTGCAGCTTGTCGTTTGATGCTAGATATACTTCCAGGATTAGAAACATCAGCAGTATTTCAAC
CAGATATGGAAGGTCTTATAAATAGATTATTTTCTTGGGCAGAGAAAAGCATTGAACCATTGCAGAGTTACTCAACCGGT
CTTTTGGCTGCTGCCATGGAAGTGCAAGACATTGCCACAGGATTTAGAGACCAGAATGCCAAGATGGTACCGTTGATGTT
GCAACGATTGCACAACTTGCAACAGAAAGCGCATGAAGATCGCCAACAAAAAGCGCACGAAGATCGTCAGAAAAATGTCA
GGCCATTTGCTCACTTTGGACAAGACAGAAACAATGTTACTGATTTTGACGACAGAGGTATTCCAGGAAAACGCAAGATG
CGAGAGAAACAGCAGAGAAACGGAGTTGCGAAGAATCAAGATTTACCCTCTTCCGATGAAGATGATTCCACGCGTAATTC
CGATGACATGCCAATCGTCAAGAAAAAGAAGAGCAATTTTGGTTGTGAAACGCCTGTAAAAAATAGTGAGCTATATCCTG
TGATTATGTCTCCGCCTCTATCCATCCCGAAAAGCACGAATAACTCTGTCAATTCCAAAGTGACACCGTCAAAACAAAGT
AACTCCACGAGGCTCACGAATATACCACTGTCTGCTAGGTGTAATCTGCATAAGTTGTCTCAGAGCTCCAATATGCATTC
GACACTGCTAGATGGAAATTCAAATTCGTCCTGGGCTGAGATGGAGTCGTATGTGATCGGCAATATTCAGATGCATCCTC
TCACTCTAGCGACTCGACAGATGCTGATCTTACGTTATTTGACGCCTATGGGAGAGTATCAGGAATTTCTCGGTCACGTG
TTTGAACAGAACGCTTTGGACTTAATATTGAAATACATAAATGTACGAGAAACGAAGGACAGCAGGCTCGCTTTTGAGGC
TCTTAAGTATCTCGCATCCTTGTTATGTCACAAGAAGTTCTCAATCGAGTTCCTCAACGTCGGTGGTTTGCAAAGATTGT
TGGACGTGCCGAGACCAAGTGTCGCGGCAACAGGTGTGTCTATATGTCTCTATTATCTCGCATATTGCGAAGACGCAATG
GAACGAGTGTGTCTGTTGCCGAAACACATAATATCCGATCTTGTGACATACGCGTTGTGGTTATTGGAACGCAGTCATGA
TTCTGGACGATGTCATGCGACTATGTTCTTCGGCTTTTCTTTCCCATTCAAAGTTATATTGGAAGAATTTGATGCACAGG
ATGGTTTGAGAAAGCTATTTAATGTGATATCCACCTTACCGATTCTAAATGTCGAAGAAGAACCGACAATAAACGACGAT
GAAGAATGTGCATCAAGACAAATCGTACGACATGTAGCTGTTGCGCTGAAAAGATACATGGAAGCGCATTTGCATTTGAA
AGCTGAACAATTGCAGCGTGCGGAAAATATTAGAGCTGAACGTGATACATGGCAGCCCTCATTACCACCTTACAAGGCAT
GCAAGCTTAGCAGTGAAGAAGTACAGGCGAAGGTGGAGATCCTCCAAGAATTAATGTCAATTAGAGCAGTGTGGCCGCCA
GTGGAGGAACTTTATCGTTTAGGTGGTATCACATTGCTCTTGCAAATTATAGCGTTTGCTCGCGAATGGAATTATAGCGG
ACGGGTGCACACAACTTCCAGCGCAGAGACAGTTAGATCATGTTTGGACGTGATTGCAATTTGTTCTGTTGTTCCCAAAG
TCATGTTGCTACTGTGTGAAAGAGTCGACATGCCAGACTTGTCAATGACAATGGCAATTAATCTTTTGCTAGCTGCGGCT
GAATGTGAAATTATCGCGGACGCTGATGTACAGAGAGCAGCACTTAGAGCTGTAATTAATTGTGTATGTGCTCCCATAAA
CAGGGTCGGAGGAAATGTAGCTAGATACTCCATAAGTGGATCTACTAAGAAAAAGGCAAATATTCACAATAGTGAGGAAT
TGATACAAAAAGTATGGGAAAGTGTCAGATCAAATAATGGAATAATGGTATTACTGCAGCTAATGATGGTGAAGACACCC
ATTACTGATGCAGATAGTATACGAGCATTGGCATGCCGTGCATTAGCCGGATTAGCACGCAGCGAGAAAGTTAGGCAGAT
TATTAGCAAGTTACCAATGTTCACAGATGGACAAATCCAGTCTCTCATGAAAGATCCTATTTTGCAAGAGAAACGACAGG
AACACGTCACTTTTCAAAAGTATGCCCTCGAATTAATGGAAAGGGTGTCTGGTAAAGCAAAACCAACAGGTGCAGAATAT
GAAATCTCTTTAGTTAGTTTGCACAGGGCCAATGTTGTGGCGCAAACGAGGATACAATATAATGAGCAACAACTTAATCA
ATTAATATATCAGCATCTGATGTCGAAGGGATTATCCGAGACAGCTAATACGTTACACAGAGAAGCAAACTTGGAGTCAT
CTGCACTTATGAGATCTACAACAGCATATCAACCTTTCACATACCGAAATCCTGGAAATGTAACCCCAAGAAATAGTTTT
TCTGCATCTGTCAATTTATACAATACAATCAGGTGTACACAAAGAGAAGCTAATTGTAGAAACAATACCACCACTCCCAC
ATCGTCATCTCGATTTATATCCCATACAGGTGTATGCTCTGCTTCGCCGTCTGTGAGTAATAACATCCGATTGAAACTCG
CAGACTGCCTGAATCAAAATGTCATTTCGAATAACGTAAATCTGCCAATTAAACTACAAATTAATCAGAAAAAATCAATA
TCATCCGACAGACAATCTCTAGTCATTCCAACTGGTTGCCAATCTATAGTACAATCTCAACCAACCAGTTGTAGATCTTT
ACAGAAACAGATTTCTAGAGACTCTGGAGGTGGCGGAGGGCCTGGTGTAGCTACTTCCAATTTATCTGTTACTCTCGATT
CTATTATTACGGAATATTTAACCAATCAACATGCTCTCTGTAAAAATCCTATGGTAACGTGCCCACAGTTTAATCTTTTC
GAGCCTCACAAGTGTCCGGATCCGTGTACAAAAAACTCTTCGCCAACGAACGTCACAGTAAGATTAGCTAGGCGGGCATT
AGGGATGGACGGCAGAAGATTAGATAGGAGACACATTTACAGCCGTTTCTGTCCTGTAAAAACTTTTCGGCCTACCGATG
TAGGAGGAATTGCCTTCACTTGTTGTACTTTCTCGCCTTGCACACAATATCTCATTTTGGGCACCCATGCTGGAGACATC
AAAATGTTCAATGTCCATACAGGAATGGAAGAGGCGACTTATCAATGTCACGAGTCATATGTGTATCATATGGAATGTAA
TCAGCGTGGCAATCTTTTGTTGACCTCGACCACTTGGAGAAGTCCTATGTCAGCACTCTGGGACATAGGGGCGTTTTTTG
AAATGAAACTTCCTTTAGAAAATGAAGAATATGTTGAATTCGGGAAGTTGCAGGACAGAATAATCGGTACGCAAGCAGAA
ATCGCGACAATATATGACATAGGAACTGGTAAATTATTAACAACCTTGACACCATCAATTTCAAATCAATATACCAAAAA
TCGAGCAACTTTTAGTATGAATGATGAATTAGTGCTTAGCGACGGCATATTGTGGGATGTTAATTCGGGCAAGGAAATCC
ATAAATTCGATAAATTGAATCAAACATTAAACGGAGTTTTTCACCCAAATGGAACCGAAGTTGTGTCCAATACCGAAGTG
TGGGATTTGAGAACATTTCACTTACTCAAGACAGTTCCTACTCTGGATGAAATGGAAGTCATCTTCTCACCGGTCAATAA
TATTATATATGCAGTTGCATTAGATCAAGAAAATGAAAATGATTCTCATTATGTGACTTCCTTTAAGACTCTGGACGCTT
TAGATTACAGTAACATTGCGACTTGTGATGTGAAAAGAGGAATCTATGGCCTTGCGTGCAACAAATTTGATACTCAAATT
GCCATAGTGGAAAATATAGGTGAATTCTCGAGTATACAGGAATCGTGCGTTAGATTGTACGACGTTGGAAGACAAAGAGA
CGACGAGGATGAAGCAGATGAGGATGATGATGAAGAAGATCTTGATGCCAGTGACGACGATGGTTCAAATTCGGCGTCTG
ATGATAATAATGTAGATGAATCATATGTTATTTAA
PEP:
>LH21744-PA
MASAESLAEVTDVVQILRQWEEEHSSPTYDPIPVLQRLADIIELETENYMKMDPDPFDERHPSRTDPECNFGHILKVLFR
KDNFMTKLINDYLRDTYWSRAGVTGRDVRKLNIAACRLMLDILPGLETSAVFQPDMEGLINRLFSWAEKSIEPLQSYSTG
LLAAAMEVQDIATGFRDQNAKMVPLMLQRLHNLQQKAHEDRQQKAHEDRQKNVRPFAHFGQDRNNVTDFDDRGIPGKRKM
REKQQRNGVAKNQDLPSSDEDDSTRNSDDMPIVKKKKSNFGCETPVKNSELYPVIMSPPLSIPKSTNNSVNSKVTPSKQS
NSTRLTNIPLSARCNLHKLSQSSNMHSTLLDGNSNSSWAEMESYVIGNIQMHPLTLATRQMLILRYLTPMGEYQEFLGHV
FEQNALDLILKYINVRETKDSRLAFEALKYLASLLCHKKFSIEFLNVGGLQRLLDVPRPSVAATGVSICLYYLAYCEDAM
ERVCLLPKHIISDLVTYALWLLERSHDSGRCHATMFFGFSFPFKVILEEFDAQDGLRKLFNVISTLPILNVEEEPTINDD
EECASRQIVRHVAVALKRYMEAHLHLKAEQLQRAENIRAERDTWQPSLPPYKACKLSSEEVQAKVEILQELMSIRAVWPP
VEELYRLGGITLLLQIIAFAREWNYSGRVHTTSSAETVRSCLDVIAICSVVPKVMLLLCERVDMPDLSMTMAINLLLAAA
ECEIIADADVQRAALRAVINCVCAPINRVGGNVARYSISGSTKKKANIHNSEELIQKVWESVRSNNGIMVLLQLMMVKTP
ITDADSIRALACRALAGLARSEKVRQIISKLPMFTDGQIQSLMKDPILQEKRQEHVTFQKYALELMERVSGKAKPTGAEY
EISLVSLHRANVVAQTRIQYNEQQLNQLIYQHLMSKGLSETANTLHREANLESSALMRSTTAYQPFTYRNPGNVTPRNSF
SASVNLYNTIRCTQREANCRNNTTTPTSSSRFISHTGVCSASPSVSNNIRLKLADCLNQNVISNNVNLPIKLQINQKKSI
SSDRQSLVIPTGCQSIVQSQPTSCRSLQKQISRDSGGGGGPGVATSNLSVTLDSIITEYLTNQHALCKNPMVTCPQFNLF
EPHKCPDPCTKNSSPTNVTVRLARRALGMDGRRLDRRHIYSRFCPVKTFRPTDVGGIAFTCCTFSPCTQYLILGTHAGDI
KMFNVHTGMEEATYQCHESYVYHMECNQRGNLLLTSTTWRSPMSALWDIGAFFEMKLPLENEEYVEFGKLQDRIIGTQAE
IATIYDIGTGKLLTTLTPSISNQYTKNRATFSMNDELVLSDGILWDVNSGKEIHKFDKLNQTLNGVFHPNGTEVVSNTEV
WDLRTFHLLKTVPTLDEMEVIFSPVNNIIYAVALDQENENDSHYVTSFKTLDALDYSNIATCDVKRGIYGLACNKFDTQI
AIVENIGEFSSIQESCVRLYDVGRQRDDEDEADEDDDEEDLDASDDDGSNSASDDNNVDESYVI
Swiss-ProtProtein VPRBP
KEGG     K11789     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF08513  LisH; LisH     
SMARTSM00667     
ProSiteProfilesPS50896  LISH; LIS1 homology (LisH) motif profile.     
OrthologiGroup-00024    Protein VPRBP      

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