Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH25134
Positionscf7180001005085:2147808..2156533[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH25134
sequence mRNA:
>LH25134-RA
ATGGAGGCCAGCGCGTCCAGGAACGAATCTGTGATCGCACCAGAGTTGTACTTTCTGATCGCGAAGTTTCTGGCGTCGGG
GCCCTGCCACGAAGCCGCGAGGGTGCTGAAAGAAGAATTGCAGACTGCTAAGGTATTGCCGCCGCGACTCGACTGGAAGG
GAAGGGAGTTTAGCCAGCCGTTCGAAGAATTGGAGAGAAAATATCCTCACATTGCGCCAAATCATTTGCTGCAAATATGT
GCGAGGATTGGACCAGTGTTAGAGAAAGAAGTGGCACCATGTATTCCTGGAGCAATATCGCTCTTGGGAGCAGGCAGGCA
GTCGTTGCTGCGTACTTGCGAAGATCTTACGCGCCAAAAACGCAGCATCTTCGATTATTCCGGAAGGTTCGGTGGAAAAT
CCTTCCTGGGAGTACCTTCCAACTACACTGTGCATAATATAGTACGTGTACTTCAGGGACGTGAGAACTCTGGCCCTTTA
AGTCGAAGAGAGGCAGTACCAACAAAGTTTTATAGCAAGATGCAACAGTACCGACACACGTTGGGTCATTTATCTGCGGT
ATACTGCGTGCTATTTGATCGCACTGGCAAGTATATTATAACCGGAGCGGATGACTTGCTCGTCAAAGTGTGGAGTGCCA
TCGATGGACGTTTACTCGCCACTTTTCGAGGCGCGTCCTCAGAAATTATGGACATCGCTGTGAACTTCGATAATTCTTTG
CTAGCAGCTGGAAGCATAGATCGAGTATTACGAGTCTGGTGTTTCCAGACGATGTCGCCTGTGGCAGTTTTGACTGGACA
TTCAGGCATGATCACATCCGTCAATTTTTGTCCAATAGCGTGTAATGATATTTACTATTTGGTCTCTACTAGTACTGATG
GATCTGTAGCCTTTTGGTCTCACACAAAGAAACACAACGAGAGAGCTGTGTTTCAAGCAAAACCTATTCAGTTCCTCGAG
AGAATGAGACCTGGTCAAGCACAAATGATTTGTGCCTCTTTCAGTCCTGGAGGTGCCTTTATAGCAGCTGGATCTGCGGA
TCATCATGTGAGAGTTTATGCGATGTTAGGGGACGAAGGGCCGCGCAGAGTCCTCGAAGTCGAGTCTCACACCGATACTG
TGGATAGTATTCAGTGGGCGCACTACGGTTTAAAATTCATTTCTGGTTCTAAAGACGGTACCGCGAACGTGTGGCATTTC
GAGCGACAGCAATGGATGCACAAACAGCTGCTTATGACAACAAAGCTCCTTGGAGAACCGGAAGCGGATGACGACACGAA
CAAGAAAGCGAAGGTGACCATGGTTTGTTGGGACGTGAGTGACGAATTCGTTATAACAGCCGTGAACGATTATTCGCTGA
AAGTGTGGATTGCAAAATCGGGCGCACTGATAAGAGTTTTGCGTGGACACAAAGATGAGTCGCACCCGATTGATCCTCGA
GTGATACTCAGCGCTGGTCACGACGGACAGCTTATTATCTGGGATGTGCTGAATACGGAACCGATAGCGTGTTTCCAAAA
TTTCGTTGAAGGCCAGGGTAATTGTGCTGTCTTCGACGCGAAATGGTCGCCGGATGGTACTATGCTTGTCGCGACAGATT
CCAACGGACATCTTTTGATCTACGGATTTGGATCTGGCGTTGAGAAATTAAAAATTATACCGAAAGAGTTATTCTTTCAT
ACGGATTACCGACCTTTATTGAGAGACTTAAATAATTGCGTTCTCGACGAGCAAACGCAAATAGCACCGCATTTGATGCC
ACCGCCATTTTTGGTTGACGTGGACGGAAATCCGTATCCACCGCTGCTGCAAAGATTAGTGCCGGGAAGAGAAAATTGCA
GGGGGGAGCAATTGGTGCCGAATATTGCAGTTGGTGCTGGTGGAATGCAAGAAGTTATAGAAGGTCTTCCAGAGCAAGAA
GCGCCAAGATCGAACATCGATCAACTGATCGAAGCTCTTGCTCAGAGACAAAACATCAATGCGGAAGGTGAAGTTGTTGG
CGAAGAGAGGGGGGAGAATAGTATTGCCGAGCAACCGATCCGACAATTGGCGAGTCCTCGTGGCAGCAGAGCTGGCTTGA
GAAGAGAAGGTAACGTCGAGGGCGTGCGACAAAGTAGCGGCAATTGGCAAAGGGATAGCAACACGCCGTGGAACAAACCT
ATTCTCGCGCGCCCCATGAATGAAGCCATCAGAGAGACCCAATGTAGAGCGGTCTACGCGATGGCCGACATGGAGTTGGA
ATGCTGGCGACGAGAAATGCGACGGCGACCACAGCCTACGAGCACTGCCGATCAAGGCAATACGAAGAGTAAACTCGTAA
ATCGCAGACGCAACCGAACTATTAGACACAACTACAGAACAAGAGCAGCGCGCGACGAGGAACAAGAGAACGAAGAATTT
GAGAATGAGCACGCCACGTCAGCGAGTTCAGCCAGCAGCAACAGCAACGATTCCACTGCTCACGAGGAAGATATGTGTTC
TGACAGCAGTACTACAGACTCGAGCACCGAGTATTCAGATTGGATCGCGGATCACGGATTGAATTTAGAACCGCCCAAGC
GTAGCAAACGTAAACCCGTGAAAAAGCGATCGATTACACCGCCCAGTGATTCAGACAGAAGACGTCCTAGTAGGCGTCCT
AAGAAAAAAGAAATACAAATACTTAATGGAATCCGTGATGTTCCCGAGCTTTATCGGCCCCTGGAATGGCTTACGGAAGT
AATACCGAGAAAAGCTCCTTATTATCCGCAGATGGGCGATGAAATTGTGTATTTTAGACAAGGTCATAAATTCTATTTAG
ATGCAATCAGGAATAAAAAGATTTACGAACTTAATCTGCGGTGTGAGCCATGGACCAAGATAAATCTTAGAGCACAAGAG
TTTGTAAAAGTAGTGGGTATTAAATACGAAATACGACCGCCTCGTTTGTGCTGCTTGAAATTAGCACTGATGGACGAGAA
CGGTCGGCTGAGCGGGCAGAATTTCACTATCAAGTATCATGATATGGCCGATGTGTTGGATTTCCTGGTCCTACGTCAGA
CCTTCGATTCAGCGTTGGCGCGAAGTTGGTCCGAGGGCGACAAATTTCGTTGCATGATCGACGACGGTTGGTGGATGGGG
CAAATTGTCGGAATGGAACCGCTGGACGAGGAATTTTCAGATTCACTGTTCATGTGCTTTCGCGTTCGATGGGACAATGG
AGAATACGAGAAGATGAGTCCTTGGGATCTTGAGCCCGTTGACGAAGAGAGACATCCCGTAGAAATCGGCGGCGCCGTTC
CTGTGCTGCCGGAGGAGAGACAAGCGATACTGTATCAGCCTCATGCGGAAGAGTGGCCCATGGGCGACAGAGAAGCGACT
TGTCGCCGAATCATACGAGGCCTGGATCAGGTGATGAGCCTCGCGATCGCTGAACCGTTCGTGGCGCCGGTGGATCTCAG
TCTTTATCCCTCTTACGCTTACATTGTGGAGTATCCAATCGACTTGTCGACCATAAAAGCTCGCTTTGATAATCATTTCT
ACAGAAGAATCACGTCGGCGCAATTCGACGTGAGGTATTTGGCGACGAACGCCGAGCAATTCAACGAGCCGCACAGTCAT
ATTGTGAAAAAGGCGCGAATAGTCACTGACTTGTGCTTGCGTATAATTAATGAACATTGTTTCTTACATCACTACGCTAG
TCTTTCTTACACTAGAGAAACCACCGACGTGGATGTTCCGGCGATATACCATCAACTGAACGATACGTATCACTCCTCCG
AGTCGGAAATAGACATAGAGGATAGGCCGTCGACGAGTAAACAGAAATCCACGTCGAGTAGAAATTTACGTTCCCAAGAA
GTCTCGCAAGACTGGAAGCTAGCGAGTCGTCAATTACTGGAGACCCTGTGGCAGTGCGAAGATTCGATTCCTTTCCGAGA
GCCGGTCGACAGATTGGAGCACCCGGAATATTATCAGATAATCGACACACCGATGGATTTGCGCACTGTCAAGGAAGATT
TGTTAGGTGGCAATTATGAGACGCCAACGGAATTCGCCAAAGACATGAGATTGATATTTTCGAATAGTAGGAATTTTAAT
ACGAACAAGCGTTCAAAGATATATTCGATGACAATAAGACTGTCGGCCTTGTTCGAGGAGCATATACGTAGGATACTGTC
AAATTTTAATTCGGCTCGCAGACGTAAAAGTACTAAAGCGAATCCGAAAGCGAAAGCGAAAGGGAAAGGAAAAGGGAAGC
AAAAGAGGAAACACAAGTTAAGCAACGGTACAGGACCTTCCAAGTCGAAATCAGTCCCTAGCGACGATGATGACATGAAT
AGCGAAGACGACGACGACGAAGAGTCTGGTAAAAAATACAAACAGAACAATTCTGACATAGATGCACCTGGCCCGTCTGG
ATTAACAAACGGTCACACGAAACGGTCTAGCTTGGGCTCGACTCGGAGCCCGTTGAAGCTACGGATCTGCCGGACGACCG
TGTCGAAGAAGATGAAGATGAAGGATAGTGATAGTGAAGACAGTGAATCTGATTCAATATCGGACGTCGAGAGTAGTGAC
AGTGCTCCTGTCCGAAGAACTAGAGCGCGCACAGTGGCGTCCAATGTTAGTGCCGATACCGATTCCGGGGACGATTACAC
ACCCGGCGGTCGCAGCAAGCAGGTTCGCAAGAATCGCGGAAAGAATATTAAGAACGGTGCAAATCACAAGAAACAGTCCA
AACCCAAAGTGAAACCGAATGTCATCGAGGAGGACGACGACGATGACGACGATGAGTATGTTACGGAGGACAAAGCGAAC
GAGGAAGACGAGGAGGAGCAGTTTGTCGCGCCGGAGTCCACGGAGGAGGAAAGTGAAGTCGAAATGTTTATAAAGAGGGA
TACTAGATCGCGAAAGCTAGTGACCGAGAGTGAGGAAAACCAAAAGTACACAGTTAAGAATGGAAAGAACGATAACAGCG
AGAGCGAAGAGGAAAAGGAGGACGAGGAGCAGGGCGAGGAGCAGGATGAGGAGCAGGACGAGGAGCAGGACGAGGAGCAG
GAGGAGGACGACGAGGAGGAGGAGAAGGTGGAACAGGAGCAATCGCGGCATAAAGCTAACAATCAGGACTCGGAGGACAG
TGACTATTCGTACAAAGGGTGCAAGTCGCGCCCGAGACGACGGAACCAGCGCGCTTCCGTGGACTCGGAGAACACGAGGC
AATACAGCAGCAGCAGGCGGTTTGTAGGTAAGAAGCGTCCCTGCTACAACGAGGAGAGTGACGATAGTACCACGATGCCG
CAGAGAAATCGGCGTAAGATCAAGCGTCGTTCGTACGCCGAGGAGAGCGACGAGAGCATGCCGGAGCCGGAACCGGAACC
CGGCATTAGTATAAGTAGCAGGGGTCGCATACGTAAAATGACGCCGCGCGCCCGCGCCTATCTTCTAGAATCACCTTAA
PEP:
>LH25134-PA
MEASASRNESVIAPELYFLIAKFLASGPCHEAARVLKEELQTAKVLPPRLDWKGREFSQPFEELERKYPHIAPNHLLQIC
ARIGPVLEKEVAPCIPGAISLLGAGRQSLLRTCEDLTRQKRSIFDYSGRFGGKSFLGVPSNYTVHNIVRVLQGRENSGPL
SRREAVPTKFYSKMQQYRHTLGHLSAVYCVLFDRTGKYIITGADDLLVKVWSAIDGRLLATFRGASSEIMDIAVNFDNSL
LAAGSIDRVLRVWCFQTMSPVAVLTGHSGMITSVNFCPIACNDIYYLVSTSTDGSVAFWSHTKKHNERAVFQAKPIQFLE
RMRPGQAQMICASFSPGGAFIAAGSADHHVRVYAMLGDEGPRRVLEVESHTDTVDSIQWAHYGLKFISGSKDGTANVWHF
ERQQWMHKQLLMTTKLLGEPEADDDTNKKAKVTMVCWDVSDEFVITAVNDYSLKVWIAKSGALIRVLRGHKDESHPIDPR
VILSAGHDGQLIIWDVLNTEPIACFQNFVEGQGNCAVFDAKWSPDGTMLVATDSNGHLLIYGFGSGVEKLKIIPKELFFH
TDYRPLLRDLNNCVLDEQTQIAPHLMPPPFLVDVDGNPYPPLLQRLVPGRENCRGEQLVPNIAVGAGGMQEVIEGLPEQE
APRSNIDQLIEALAQRQNINAEGEVVGEERGENSIAEQPIRQLASPRGSRAGLRREGNVEGVRQSSGNWQRDSNTPWNKP
ILARPMNEAIRETQCRAVYAMADMELECWRREMRRRPQPTSTADQGNTKSKLVNRRRNRTIRHNYRTRAARDEEQENEEF
ENEHATSASSASSNSNDSTAHEEDMCSDSSTTDSSTEYSDWIADHGLNLEPPKRSKRKPVKKRSITPPSDSDRRRPSRRP
KKKEIQILNGIRDVPELYRPLEWLTEVIPRKAPYYPQMGDEIVYFRQGHKFYLDAIRNKKIYELNLRCEPWTKINLRAQE
FVKVVGIKYEIRPPRLCCLKLALMDENGRLSGQNFTIKYHDMADVLDFLVLRQTFDSALARSWSEGDKFRCMIDDGWWMG
QIVGMEPLDEEFSDSLFMCFRVRWDNGEYEKMSPWDLEPVDEERHPVEIGGAVPVLPEERQAILYQPHAEEWPMGDREAT
CRRIIRGLDQVMSLAIAEPFVAPVDLSLYPSYAYIVEYPIDLSTIKARFDNHFYRRITSAQFDVRYLATNAEQFNEPHSH
IVKKARIVTDLCLRIINEHCFLHHYASLSYTRETTDVDVPAIYHQLNDTYHSSESEIDIEDRPSTSKQKSTSSRNLRSQE
VSQDWKLASRQLLETLWQCEDSIPFREPVDRLEHPEYYQIIDTPMDLRTVKEDLLGGNYETPTEFAKDMRLIFSNSRNFN
TNKRSKIYSMTIRLSALFEEHIRRILSNFNSARRRKSTKANPKAKAKGKGKGKQKRKHKLSNGTGPSKSKSVPSDDDDMN
SEDDDDEESGKKYKQNNSDIDAPGPSGLTNGHTKRSSLGSTRSPLKLRICRTTVSKKMKMKDSDSEDSESDSISDVESSD
SAPVRRTRARTVASNVSADTDSGDDYTPGGRSKQVRKNRGKNIKNGANHKKQSKPKVKPNVIEEDDDDDDDEYVTEDKAN
EEDEEEQFVAPESTEEESEVEMFIKRDTRSRKLVTESEENQKYTVKNGKNDNSESEEEKEDEEQGEEQDEEQDEEQDEEQ
EEDDEEEEKVEQEQSRHKANNQDSEDSDYSYKGCKSRPRRRNQRASVDSENTRQYSSSRRFVGKKRPCYNEESDDSTTMP
QRNRRKIKRRSYAEESDESMPEPEPEPGISISSRGRIRKMTPRARAYLLESP
Swiss-ProtPH-interacting protein
KEGG     K11798     
SUPERFAMILYSSF47370  Bromodomain superfamily     
Gene3DG3DSA:1.20.920.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
PRINTSPR00503     
CoilsCoil
ProSitePatternsPS00633  BROMODOMAIN_1; Bromodomain signature.     

You might be interested in these researchers

You might be interested in these references