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Gene detail [Fasta]

Species Linepithema humile
GeneLH25095
Positionscf7180001005085:1681604..1688330[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH25095
sequence mRNA:
>LH25095-RA
ATGAGTTCCGTTTGGAAACGTCTTCAGCGGGTGAATAAGAGGGCCGCCAAGTTCCAGTTCACCGTTTCATACCACGAAGT
CACGTTAGAGACGACGACGAAATGGAAACCAAACAAGCTAAGTGTTGTTTGGACAAGACGTAGCAGGAGAGTTAGTTCGG
AACCCTTAGACTGGGAACCAATTTTGAGCGATCCGTTGAAAGGTGTTATTAGCTGGGCAGTTCCTGACAATCATACAGTT
TCCGTGACGTTATTTAAAGATCCAAGAACACACGAACTAGAAGATAAAGATTGGTCATTTGTCATTGAAGATGTGTCGTC
GACGGGAAAAAGGCGTCATGTGGCCACCACGAATATAAATATGAAAAAATACGCAACCCTGGAATCTAGTCAGCAACAGC
TCAAATTAGACTTAAAGCCGACTTCTAAAAAGATCGTTAGCGCTACACTCGAATGTACTTTATCATGTGTGTTTCTGCGA
GAGGGCAAGGCAACGGACGAAGATATGCAAAGTATGGCTAGTTTAATGTCGGTTAATAATAATAGCGATATTGCGCCCTT
AGATGATTTTGATAACGAAGACATACCGGAAGATGTCGAAGAAGTATCGGTCAAAAATTTGGATGAGATTCTAGATATCT
CAGCTCAACTCGATTTAATGACGAGTAGTCTCACCGAAAGTGAACTACCTAGCACTCCTATAAGCGTGGCGAGCTTATCA
AAGGACGACACAACTCCTGTGAACGACGGAGAACATTTTATACGCGATATTAGTCTAACAAAAATTGGGGAATCTTTAAA
AGAAAAGTCACCTATAAAAGACAGTGTTGCTGTTGAAAATGACAAAAACATCGAGCACAGCGTACTGAGATTGCCGTTGC
AGCCATTAGATCTTAAGAAAAATGACGCAAACGTTCCGAGATTGAAGGAAATTACTCCTGGTCAAGATTTATTAGAATGG
TGCAAAGAAGTCACTAAGGATTATCCTGGTGTCAAAGTCACCAATCTGACGACGTCTTGGCGAAACGGAATGGCATTCTG
CGCGATTATTCATCATTTCAGACCCGATTTGATAGACATCGATTCCTTATTATCGCACGACGTAAAAGGCAACTGTAAGA
AAGCATTTGACGCGGGCGAAGCTCTAGGCATACCCAGAGTTATAGAACCAGCAGATATGGATATATTAACTGTACCTGAT
AAACTAGCTGTGATGACGTATTTGTATCAATTGAGAGCGCATTTTACCGGCCACGAACTGGAGGTACACCAAATAGGAAA
AACAACGGACGAATCCTCTTACATGATCGGTAGGTTTAACACAGACAACAATACAGACGTGAGTGTCCAGCTGTTTGGCC
AAGAAATCATTAACTTACGAAAGAAGGAACAGATTGATCAGAAGAACAATAAAGCGGACAATCGACGGTCAAATCCGTTC
GACAATAAGAAGGACGATATCTGTATCGACTCTTTAAAGAACAAGCTGCACTTGAGTCTGAACACGCAGGACACACAGGA
TCACGATCAGTGCAACAAGGACAAATCGCCGTCCAGCGTGAAGGATGTCAAGGACATTATATTGGCCAGTTCGAAGAGCA
TTCTGGGCAAGGTGTTGTCGCCGACCAAGGAGAAGTACTCGTCGAGAGAGAAAAGCAAGTCGCCGCCGAGAGTGCAACAA
GCGCAGCAACGTCCGATACTTATGACACGCCGGCAATTAACCGATCCGTTCGGCTCCGACGACGAGGAGGAGAACATACA
GATAATCGACGACAAATGGTCGCAATCGATCTCGATTACCAAATCGCAAAGTCCGGTCCGTGATCCATTAGTTAGCCGAC
ATGATGAGTTGCGAGAGCGTGCGAGATTACTTCTAGAACAAGCCAGAAACCAGACGAAACCAGCCGGGGACGGTTGGATT
TTATGTAAATGTAACTTATTTTTGCAGATACAGAACGATGACGAGAGACAGCAGCAATTGCGGGAAAGAGCGAGACGCTT
GATAGCGGAAGTGAAAATGGGCGTCACTGTGACTCCGAGTCAACTGAACGACGACAATAGCAGTGATCGACGATCGATAG
ACGATCAGAATAATAGTCCTAGACGTAGCATCACGCCGTCAACGCCCGGTGATAGACTCAGTATTAAGTCTGAGTACAAT
GGAAATATACTGGGAAACACAAGTGTGATAGATGGAGAGAAGAAAGCCGGTTCGCCTTTGTATTCCTTTTCCAAAATCAT
AGAAAGAATTTCGCCCGACAAAGGAAGTCCTGACAGAACTCCGTACACACTTCGCGGGTTGGGCAAAGACATGACATCGT
ATATACAAAACGAGCTCGAGGCGCTCGAACGAGAGCAAAATCAGATTGACATACAGGCTGGCAAGCTTGAGAAGCAATTG
AGAGCAGCAATGGAAAGCGATAACGAGGATGAAACGGAAAGACTGATGTCTTTGTGGTTCACTCTTGTTAACAAGAAGAA
TGCGCTCTTGAGAAGGCAAATGCAACTAAACATACTGGAAAAGGAAGATGATTTAGAGCGACGATTCGAACTTCTGAATC
GCGAATTAAGAAGCATCCTCGCAGTGGAAGAGTGGCGGAAGACATCCGAGCAAAAAATGCGTGAAAATTTATTGTTGGAA
GAATTAGTGTCGATCGTGAACAAAAGAGACGAATTGGTGCATCATTTAGATACGCAAGAGAGAGCCATCGAGGATGATGA
CGAGATAGAACGCGACTTATCGCGCGCTGGATTAGCTCAACGAAACAAAAATTGTGTTGTGCAGTGA
PEP:
>LH25095-PA
MSSVWKRLQRVNKRAAKFQFTVSYHEVTLETTTKWKPNKLSVVWTRRSRRVSSEPLDWEPILSDPLKGVISWAVPDNHTV
SVTLFKDPRTHELEDKDWSFVIEDVSSTGKRRHVATTNINMKKYATLESSQQQLKLDLKPTSKKIVSATLECTLSCVFLR
EGKATDEDMQSMASLMSVNNNSDIAPLDDFDNEDIPEDVEEVSVKNLDEILDISAQLDLMTSSLTESELPSTPISVASLS
KDDTTPVNDGEHFIRDISLTKIGESLKEKSPIKDSVAVENDKNIEHSVLRLPLQPLDLKKNDANVPRLKEITPGQDLLEW
CKEVTKDYPGVKVTNLTTSWRNGMAFCAIIHHFRPDLIDIDSLLSHDVKGNCKKAFDAGEALGIPRVIEPADMDILTVPD
KLAVMTYLYQLRAHFTGHELEVHQIGKTTDESSYMIGRFNTDNNTDVSVQLFGQEIINLRKKEQIDQKNNKADNRRSNPF
DNKKDDICIDSLKNKLHLSLNTQDTQDHDQCNKDKSPSSVKDVKDIILASSKSILGKVLSPTKEKYSSREKSKSPPRVQQ
AQQRPILMTRRQLTDPFGSDDEEENIQIIDDKWSQSISITKSQSPVRDPLVSRHDELRERARLLLEQARNQTKPAGDGWI
LCKCNLFLQIQNDDERQQQLRERARRLIAEVKMGVTVTPSQLNDDNSSDRRSIDDQNNSPRRSITPSTPGDRLSIKSEYN
GNILGNTSVIDGEKKAGSPLYSFSKIIERISPDKGSPDRTPYTLRGLGKDMTSYIQNELEALEREQNQIDIQAGKLEKQL
RAAMESDNEDETERLMSLWFTLVNKKNALLRRQMQLNILEKEDDLERRFELLNRELRSILAVEEWRKTSEQKMRENLLLE
ELVSIVNKRDELVHHLDTQERAIEDDDEIERDLSRAGLAQRNKNCVVQ
Swiss-ProtEH domain-binding protein 1
SUPERFAMILYSSF47576  Calponin-homology domain, CH-domain superfamily     
Gene3DG3DSA:1.10.418.10     
PfamPF10358  NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins     
SMARTSM00033     
ProSiteProfilesPS50021  CH; Calponin homology domain profile.     
CoilsCoil

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