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Gene detail [Fasta]

Species Linepithema humile
GeneLH25049
Positionscf7180001005085:1205761..1232089[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH25049
sequence mRNA:
>LH25049-RA
ATGGCGGAGCGTCCCGGCGGCGGCAGGAGACGCTCGCGTCGCGACAGCACGGACACCGCGAGCTCGTTGCGCGGGACACC
GCCGACGTCGCGGGACCGCAGGACTAAGCGGTCCGGGAAGCCCGTGAAGGAACGATGGCTGCTCACGCGGAAGACGTGGC
GCTATATGGCCGACGCCGGCCGCCGTCTCATCCCGGACGGCGCGCACAATCGTCCCGAGGACATACCGAAGATCGAGCAG
TACTTCCAGGAGGTATGTCAGAAGGAGCCGCGTTTCCTGCTCTGGCGGAAGGCCTCGTATCCGGGCAGCCTGGGCTTGCG
CGCCCAGCGACGTCGACGGCAGCCCAAAGGCGGCAGTTATCGCACGCAAGCAAGTTCGGCCGATGAGGCCGACGATGCCA
GGAGCTCGCCGCAAAGCTTCGTCCTTCAAGCGACCACGTCTGGTACATTCGATCTCGCGAAGGCAAAGCGAGAATGGTTG
CTAACGTCGACCAGCGGTGACGGGAGCATGCCGTCGAGCCCGGTGATGCGTCGCAAGACGTCGCAGGAGGACGCCGAGGC
CAAGGAGTTGGCTGACATGCTGCAAAAGTATCTAAACATGCAGGGTGAGGCGACCAATCCGGCGAGAACGGCCGCGAAAT
CGGAGCAGGCGACTGAGCAGGCGGAAGGCAAAGAACCTTTCGATTATCGCAGCCTCATAAATAAATTGCAGCAACATCTA
GACACGATTGTTGCGCAGGCCAAGCGCGAGGAAGCTCCGCCTCGTAAGGGTTACTCAGAAAAAGACGCGGTGGCGACGTC
CACGCTGCCTTATCAGGGCGATTACGTTCACAAATCGCTGATGGAGACGCTGAGTCGTTACTATAGCAAATCTTCATCTC
GTGAGCACGTAATTTCCGATATTTTAACAGATCGAAAGCTCCTCGAAAAACTATACTTCGATCTGAGATGCACCAGAGGT
TTCCGGGGGCCCCGAGCGACCGGCGCGTACACCTCGCCGTCCTCTCGATGGTGGGGCCACGAGAGACTCAGGACGAAGGA
GTCCGACAGCTGGTCGTCCACGAAGAGAGATCTGATCTCGCCGCCGCCTCTGATCGCCGTTCAGGAACCCAGCATCGATC
GTAGCTTCTTCGATAACGGCGTGCAGACCGATCCGGTGCCGCGAGATGTCCTCGACGCGTGTCTGGAAAAAGATAAAGAG
GAATCCTTGCAAAAAGACCATGCGTCGCACAAGTCCAGCGGGCGAAGGCGCAGCAGTGTCGACAACGACGACGTGTCGCC
GTCCGTGAGCGACACCATCAAGAGGTACCTGCGGATGGCGCGGAAAAAATCCATGGACGCGGACAAGACCGACAGGTTCA
AGCGGGTGAACTACGACCGGAATCTGCGGAACATCAAGGCCAAGGGCGAGATCACGAAGCCCGGCGACGACGACGGCAAC
AGCAAGGGCTGCCAGACGGAGGACAATTGGGCGGCGCATTATCGCGAGATGTCGTCCGAAAATCTGTCGGACGCCGACAC
GACGACGTCGCCGCCGCCGAGCAGAAACGCCAGTTCCAGGAGCAGCATCGACGCCGGCCTCGGCTCCGAGGAGCCGTCCA
CCCCGGTTAAACAATCCCATCATCATCAATCCTTCCTGTCTCACCTTTTGCACGGTTCCAACGCGCACAAAGACAAGCCG
CATTCGGCGCCCGGTTCGCCGGCACTCACGTCAACGTCCCCGAATTCCGCAGGTGGCACCGCGATGCAGAAGAGCAAGTC
CTCGAGCAGCGTAGTGCATCACGGCAGCCGGCTGGTGGCGAAGAAGATCTGGAGATCCAGGAGCAAGAGCACGTCGCGGG
CGACGCACCAGCCGTCCGTATGGACACCTCAGGGAAAATGCACTTGGGCAGGCACGGGCGGTCGGCGCGTCACTCTGCAG
GACACACAGATACGAACGCTGTCTGATATCGAGAGGAAGGTTCTCTGCAAGGTGGCTGTAGCGAAGCTTCAAGCTCTCAA
TCTGGGTGTGCACATCAGGCCACCGAGTGAGTCACTCAGCAGCGGGTCGGTGACCACAAAGCCGAAGAGGCGGGCGTACT
TGCTGAAGAGGAAGGCTCTCACAACGGGCTTCTTCGACAATAAAGGAAAAGACGACAAGGAGAAAGACGTGGCTGGCGGT
CTGGTGTTCGGTATACCGTTATTGCAGTGTATAGAGAATGATAGAATCGCTCGAATTGCCGCTGGGGAGGTCACCGATGT
CGGCTGCCTAAGTAGGAGCAGCAGGCACGGTAGTAGGACCAGTTTTTCCAGCCTTATAGAAACACCGACGACCATCGCGG
CAAAAACGGAAGAGGCTAGCGCGCGAATAAAAATCGACTTGAACAACGCCCAAAACTATCGACCGATGTCGAAATATCGG
CGCGCGACACGTCTTTCTTGCCGACGTCACTCTAACGCCGACATCGTTAACGGCATCATTCGTTGCGTCATCGTGCTGTC
GGCGCAAGAGGGTGGTTCCTGCGAGTCTCTGTCGTCGAAAGGAGGTGCTCTTACAGGCAGTGACTCCGGAGTGCTTGAGC
TGAGCGATAGCGGTGGAGGAGGTGAATGGGATGCGGTGCCGGGTATCGTCAGGCAATGCATTAAGCACCTAGAAACGACT
GGTCTCCGGACGCTAGGCGTGTTTCGTGTGTCGCCCTCGAAAAAGAGGGTGCGGCAGTTAAGGGAGGACTTCGATTGCGG
TCGGGAGACCAAGATAGGCGCCGATCAATGTCCTCACGACGTGGCCACTCTCTTAAAGGAATACTTTCGCGATCTGCCGG
ATCCCCTACTTTGCAGGGATTTGTATCAAGCCTTTGTGCACACTCAAAAGATCAGGAACAGGCGGTTGCAGCAGGAAGCT
CTTCAGCATCTCATTCAACTTCTACCCACGCCCAATCGCGAGACTCTTTGGGCGCTTCTGAACTTCTTGATCGTCGTCGC
GGCGAACAGCGAGGACCAAAAGAGCGAGAGCGGAGAGTGGATTCCGGGGAATAAAATGGATACGACAAATCTCGCGACCG
TATTCGCGCCGAATATCTTGCACTGCGTGAAGCCCAGCCAGATGAGGGCGGAGGTTTCGGCGGAAAGGGCTGAGGAGAGA
ATAGACGTAATAAACGTGGTACGAGCACTGCTAGAACATGCGTCGACATTGTTTACGGTACCGGCGGCGTTGTTGGACGA
AGTGTATCAACACATGATGGATACTCATCCGGCGGAGCTAGATATCGCTTTGTCCCGTCGCGTCGAAGAGCAATGCGGAG
ATGAAGTAGACCCTTGCAGCGAGGCGGAGACGTTCTCGGTGGAGGAGACGTTGACTATGTCGACCACAACTGCAGCAACG
ACGACGACATCGACGAGAAAGATGTGGACAAGGGAAGAATGCCTGCATCAGACTGCCGGTATCGGCGGTGATATTGGACC
AAGGCCACGACGGCCCAAAAGACCAGGAAGTCGAAGGAAGGAGGAGGGCAGAAGTAACAGTGTCGATAGCGGATCGAGCG
AGGATCCGTCCGATCCTCGGCGAAGATCCTCGCCAATAGTGATTACCGCCAGTCTCACTATACCCATGTCCGACGCGTTC
ACCTTGAACCTCGACGACCCGGACATTCCTTACATCGAGGAGGCACCGAAGCAACCAAGCGCTCCCCCAAGGCGGCAGAG
GCAGAGATCTATTTCCGGTTGTAGCGAAGGCGGAAGACACGGAAGTGACAGCGCCGTGGGCTCTTCGGCAACCCTGTCAG
GTGATCAGGCGCCGAGTTCACCGCCCTCGTGGGCATCGTCGCCACCGGCGAGTCCCGACAGCGCTGTTACCGCCGTTTCG
TACATCCCGGATCAGGCGGTTCTTCAAAGAGTTTCGTTCACGACCTCGGGCGAGGTGAGGCAGGTGAGCAGATCGGCCGG
CCAGCAGCAGGAAGTGAACAGGAGTGCGGCGGTACCGTACACGCCGAGCATCACCAGCATCGGCGGTGCGGTTTTGAGGT
CCAAGACCGCTGATATCGAGAGAATGCTGCAAATCTCGCGGTCGGATGTCGACCCGGCGACCCCGCAGATGAGCAAGAAC
TCATCGGTGACCTCCAGCGAGAGCAAGAAGTACACGAAGAGGCGGTACACGGATTCGAGGCATCAAACACGCCACATACC
GGACGCCGATACCCTGGCCGGCAGAACATCGCTCGGCGTGACGGCTACGTCGGCGATATCGCCTTCCTCCGGCGTTTCCT
CGGCAATCACGACGACGCAGAATCAACGCGTGCAGCCCGTGTGGAAAAGACGGGAATTGATCTCTAGCGCTCCAAAGAAT
AGGGACGGATACTTCTAA
PEP:
>LH25049-PA
MAERPGGGRRRSRRDSTDTASSLRGTPPTSRDRRTKRSGKPVKERWLLTRKTWRYMADAGRRLIPDGAHNRPEDIPKIEQ
YFQEVCQKEPRFLLWRKASYPGSLGLRAQRRRRQPKGGSYRTQASSADEADDARSSPQSFVLQATTSGTFDLAKAKREWL
LTSTSGDGSMPSSPVMRRKTSQEDAEAKELADMLQKYLNMQGEATNPARTAAKSEQATEQAEGKEPFDYRSLINKLQQHL
DTIVAQAKREEAPPRKGYSEKDAVATSTLPYQGDYVHKSLMETLSRYYSKSSSREHVISDILTDRKLLEKLYFDLRCTRG
FRGPRATGAYTSPSSRWWGHERLRTKESDSWSSTKRDLISPPPLIAVQEPSIDRSFFDNGVQTDPVPRDVLDACLEKDKE
ESLQKDHASHKSSGRRRSSVDNDDVSPSVSDTIKRYLRMARKKSMDADKTDRFKRVNYDRNLRNIKAKGEITKPGDDDGN
SKGCQTEDNWAAHYREMSSENLSDADTTTSPPPSRNASSRSSIDAGLGSEEPSTPVKQSHHHQSFLSHLLHGSNAHKDKP
HSAPGSPALTSTSPNSAGGTAMQKSKSSSSVVHHGSRLVAKKIWRSRSKSTSRATHQPSVWTPQGKCTWAGTGGRRVTLQ
DTQIRTLSDIERKVLCKVAVAKLQALNLGVHIRPPSESLSSGSVTTKPKRRAYLLKRKALTTGFFDNKGKDDKEKDVAGG
LVFGIPLLQCIENDRIARIAAGEVTDVGCLSRSSRHGSRTSFSSLIETPTTIAAKTEEASARIKIDLNNAQNYRPMSKYR
RATRLSCRRHSNADIVNGIIRCVIVLSAQEGGSCESLSSKGGALTGSDSGVLELSDSGGGGEWDAVPGIVRQCIKHLETT
GLRTLGVFRVSPSKKRVRQLREDFDCGRETKIGADQCPHDVATLLKEYFRDLPDPLLCRDLYQAFVHTQKIRNRRLQQEA
LQHLIQLLPTPNRETLWALLNFLIVVAANSEDQKSESGEWIPGNKMDTTNLATVFAPNILHCVKPSQMRAEVSAERAEER
IDVINVVRALLEHASTLFTVPAALLDEVYQHMMDTHPAELDIALSRRVEEQCGDEVDPCSEAETFSVEETLTMSTTTAAT
TTTSTRKMWTREECLHQTAGIGGDIGPRPRRPKRPGSRRKEEGRSNSVDSGSSEDPSDPRRRSSPIVITASLTIPMSDAF
TLNLDDPDIPYIEEAPKQPSAPPRRQRQRSISGCSEGGRHGSDSAVGSSATLSGDQAPSSPPSWASSPPASPDSAVTAVS
YIPDQAVLQRVSFTTSGEVRQVSRSAGQQQEVNRSAAVPYTPSITSIGGAVLRSKTADIERMLQISRSDVDPATPQMSKN
SSVTSSESKKYTKRRYTDSRHQTRHIPDADTLAGRTSLGVTATSAISPSSGVSSAITTTQNQRVQPVWKRRELISSAPKN
RDGYF
Swiss-ProtRho GTPase-activating protein 6
SUPERFAMILYSSF48350  GTPase activation domain, GAP superfamily     
Gene3DG3DSA:1.10.555.10     
PfamPF00620  RhoGAP; RhoGAP domain     
SMARTSM00324     
ProSiteProfilesPS50238  RHOGAP; Rho GTPase-activating proteins domain profile.     

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