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Gene detail [Fasta]

Species Linepithema humile
GeneLH16250
Positionscf7180001004905:624628..627008[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16250
sequence mRNA: 
>LH16250-RA
ATGGCGTCGTTCAAGAAAATAAATACTAAAGTGTTTACCAGAGCGGGGCCGGAATTAACAGAAGATAACATATATTGGAA
GAAATACACACCTCCAGTTTTAGTCAAAGAATTTGGCCCAATAGACTACATTGACTTTTCTCCTGTAGAGCCTCATTATT
TTGCAGTTACCTGCTCTGTACGAGTGCAGGTATATAATCCTATCACAAAGTTGGTCACAAAAACGTACAGCAGATTTAAA
GAAGCTGCATATGGAGGTTGTTTCCGTAGAGATGGCAAACTGCTGTGTGCCGGTGGAGAGGAAACAGTGGTTAGACTCTT
TAATATTGGTTCAAATAGCATGTTACGTCTTTTTTCTGGACATAAGGCTGCGGTGCATAGAGCTTTTTTCACAGCTGATG
ACCATCACATAGCTTCATTCTCTGACGATAAAACCGTAATATTATGGGATATACCTAGTGAAAAACAGCTGATGAGTTTT
AATGAACATACTGATTATATCAGAGCTGGTGCTGTGAGCCCTGTGTCTACTGATGTATTATTATCTGGTGGATATGACAA
GATCATACATATGTATGATAGCAGAACAAATAAAAAGATACTCAGTGTCAATCATGATGCGCCAGTGGAAAGTTTACTCT
TTTTGCCAACTGGAGGAATATTCTTATCTGCAGGTGGAACGGATATCAAAGTGTGGGACGCTCTAACAGGTGGCAAGTTA
CTTGCTAAAATTACTCAACATCACAAAACGGTCACTTGCTTGAAAATTGCCTCCGATGGCCATAGAATATTGTCTGGTTC
ATTGGATAGGCATGTTAAAGTCTACGATGCTGGAACATACAAGACACTTCATACTTTGGATTATCCTAATGCGGTTCTTA
GCATAGGAATTAGTGCTGGTGACGAGACAGTCGTAGCCGGTATGGTGGACGGTTTGATTTCTGTGAGGAGACGCGAAGAA
GACGTGAAGGATGTTGTGAAACCGAAACGGAAAAAGGTGTCGTACAGGCACGCAGGCGAAAATCTGCACGTGCGAAGTAT
TGACGTGGTTGTGCAGCAGGAAGTCAAAGAAATAATGAGCAAGCACGATGCTTGTTTGCGAAAGTTTCAATACAGTAAGG
CACTCGATTGCGTCATGATGAATTATGTGGTTAATAAAATGCCGCATGTCACCGTCGCACTTACACAAGAGCTTATCAGA
AGGGAAGGCTTAAGACGAGCTTTAGCTGGTAGGGATGGCAAATCACTGGTTAATATCATCAAGTTCTTGAACAAATATAT
CGGTAGCATTCGTTTCGGCCGAGTGTTGTTACATGTTTCAAACGTTTTATTAGATCTCGTCTCTTTAATAAAATTTTCTG
TCTTAACAGATGTATACGAGGACCACTTAGACGAACTTTCGGAAGAATCTCGGAAAATGTTCACGATATTAGCGCAAAAA
CTACAAGAAGAGGAACAGTTAATTACAGCTTTGGCAGAATTGCAAGGTTCCATGCAAATGGTATTGTCCAGTGCAGAATC
GGTTTCTTCGATTTCTGCTGTAAAAGATAGTCAGAGCTTGGAGCCGTCAAATGCCGCTCAGACAGAAAGAGATCTTGTCT
TGAGTATAGCATAA
PEP: 
>LH16250-PA
MASFKKINTKVFTRAGPELTEDNIYWKKYTPPVLVKEFGPIDYIDFSPVEPHYFAVTCSVRVQVYNPITKLVTKTYSRFK
EAAYGGCFRRDGKLLCAGGEETVVRLFNIGSNSMLRLFSGHKAAVHRAFFTADDHHIASFSDDKTVILWDIPSEKQLMSF
NEHTDYIRAGAVSPVSTDVLLSGGYDKIIHMYDSRTNKKILSVNHDAPVESLLFLPTGGIFLSAGGTDIKVWDALTGGKL
LAKITQHHKTVTCLKIASDGHRILSGSLDRHVKVYDAGTYKTLHTLDYPNAVLSIGISAGDETVVAGMVDGLISVRRREE
DVKDVVKPKRKKVSYRHAGENLHVRSIDVVVQQEVKEIMSKHDACLRKFQYSKALDCVMMNYVVNKMPHVTVALTQELIR
REGLRRALAGRDGKSLVNIIKFLNKYIGSIRFGRVLLHVSNVLLDLVSLIKFSVLTDVYEDHLDELSEESRKMFTILAQK
LQEEEQLITALAELQGSMQMVLSSAESVSSISAVKDSQSLEPSNAAQTERDLVLSIA
Swiss-ProtU3 small nucleolar RNA-associated protein 15 homolog
KEGG     K14549  UTP15; U3 small nucleolar RNA-associated protein 15     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00400  WD40; WD domain, G-beta repeat     
SMARTSM00320     
ProSiteProfilesPS50294  WD_REPEATS_REGION; Trp-Asp (WD) repeats circular profile.     
OrthologiGroup-00039    U3 small nucleolar RNA-associated protein 15 homolog      

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