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Gene detail [Fasta]

Species Linepithema humile
GeneLH18404
Positionscf7180001004947:161948..177090[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18404
sequence mRNA:
>LH18404-RA
GAGCTGAAGGAGAGCTTCAATTACGGCCTGTTCTGCCCGCCGGTGAATGGAAAAGCCGGGAAATTCCTGGACGAGGAACG
CCGTCTCGGCGATTATCCCTTCAATGGACCGGTCGGGTATCTGGAGCTCAAGTACAAGCGGCGGGTGTACAAAATGCTGC
ACTTGGATGAGAAACAGCTCAAGGCTATGCACACCAGGACGAATTTGCGAAGGTTACTGGATTACGTGCAGAGCAGTCAA
GTTGAGAAGATCGCGAAGATGTGCAGCAAGGGACTGGATCCTAATTTCCACTGTCAGGAAACGGGAGAGACGCCGTTGAC
CTTGGCAACAACCCTGAAAAAACCTTCAAAAGTGATAATTGCATTGGTCAATGGCGGCGCTCTCCTCGACTATCGAACGA
AGGAGGGTTTAACGGCGATGCACCGCGCTGTTGAGCGGAACAGTTTGGAGGCGGTGAAGACTCTTCTGGAGTTGGGTGCT
AGTCCGAATTACAAGGACACGAAAGGCTTAACGCCGCTTTACTACAGTGTTATTTACAAGACCGATCCGATGCTCTGCGA
GACATTGCTTCACGATCACGCGACGATAGGAGCGCAAGATCTGCAAGGCTGGCAGGAAGTTCATCAGGCATGTCGCAACA
ATCTGGTGCAGCATCTGGACCACCTGCTTTTCTACGGCGCTGACATGAACGCGCGCAACGCGTCCGGTAATACGCCGTTG
CACGTGTGCGCGGTGAATAACACGGACGCCTCGTGCATACGTCAGCTACTCTTCAGGGGCGCGCAGAAGGACGCGCTGAA
CTACGCGAACCAGACGCCGTACCAAGTCGCCGTGATCGCCGGCAACATGGAGCTCGCCGAAGTCATCAAGAACTATCAGC
CGGAGGAAGTCGTACCGTTTAAAGGGCCGCCACGCTACAACCCGAAGCGGCGCTCGGTGGCCTTCAGCGGCACCACCTCG
ATGACGATGACGACGAGCTGCTCGGCGAGTAATCTGGGCACCCTCACCAGGATACCGTCCACCGAACAGCACGCGGCGGC
GTCTAGCGCCGGTGGTGGTGCCGCCGCCGGCACCCTCACCAGAACCGTCTCGGTGGAACAGTACTCGAGTATCACGCGGG
TGCCGTCCGCCGAGCAGTACGCCACCGCGGCGGCGGCGGCGGCGGCGGCGGCCGTGAGTCTGAGCCGAGTACCGTCCACG
GAACAACCGTCGTATCCAACGGCCGCCCCGTCGTCCGGCACGCTCGTCCGGATCGTGTCCGAGGAGAAGTACGCGCCGCC
CGGCGCCGTGTTGAGCAGAGCCTCGTCCGGCGAGCGGTACGACGCCACCCTGACCAGAGTACCGTCCACGGAGCAATACC
CGGCCGCCGCGGCGGGCCTGAGCAGAGTACCGTCCACGGAACAGTATCCCTCCACCGGTCAGTCGACCGAGTCGAGCCAC
CACGGAAGCCTCGGCAGAGTACCGTCCGTAGAGTCGAGCCGAAACGACTTACCGAGAATACCGTCCGAACAGAACGGCCA
CCGACTGACGTCGGAGTACCAGAGTCCGAATTCCTTGAGAGATCCTAACGCGAGATTGCCGAGCGCCGCGGAGAATTATT
CAAACTTGAGAATGGAGGGTCTGACGAGGCTGCAAGAGCATCGGCTCGAGCTGCAGCACCGCCTCGATATGCACAGATCG
CAGATGGAGATGCCGCCGTCGCCGTCGCCGAGCAGCAGGAGCTTAGCGCCTTTCAGCTCGGCCAGCTCGAGCCTGTCCGA
AGGCAGCAATCAACCGTCCGGCGAGGACTCGGCCAGCATCGTCACAGACAAGAGCCTCGGCGACACGGCGTCCGACGTGA
TCAGCGACAGTTCCGGGGTGGGAACCTCGCAGTCTGACACGACCAATTCATTATCCATTCCCGGCACGACGGTGGTCTGC
GTCGAGAGCTACAACAGCGGGATCACCGGCCACCTGACTATCAATCAAGGAGACATCCTTGAAGTCACCGGTGCCACCGA
CTGCGGCCTCCTGGAAGGAATCCTGCGCGGACAGGGTACCGGCCTGTTTCCCGCGCATTGTGTTCAAGAAGTCAGGTTGC
GTCACACGAACATACCTCTCGGCCCGCAGCCCGCCAGAGACCCGCGAAACCGGGTTCTCGGCCGCCGAGAGTCGCAGCAT
AAATACTTCGCTACCGCGCCCAGATTAAAGAAACCTGTTACCTCGGAACCTCGCACCGTCGTCCTTCACCGTTCACGAAA
GGGCTTCGGCTTCGTGTTGCGCGGCGCCAAAGCCACCTCGCCGTTGATGGAACTGACGCCGTCCGCCAGGTATCCCGCGT
TACAATACCTGGACGATGTCGACCAAGGTGGCGTGGCCGATCTAGCGGGTCTCCGAAAAGGAGATTTTCTCATTCAAATC
AATGGCGAGGACGTAACGACGGCCTCCCACGAACACGTGGTCGATCTAATCAGGAAGTCGGGAGAGTTGGTGCGAATGAC
CGTGGTTTCGCCGGTGATCAGTCTTCCGAATTCCCAGTCGGCGGCCGCGCTGCCAACTAGTCAACCCATTCAGAGACAGT
ACGCGACCTTGCCGCGCAAGGGTAACAACAACGTGGTGATCGGCGGCACGCTCGGCAGATCTCCAGCTCCCATGCCACCG
CGAAGAGACCCGAAGACTACGCTGAGCGTAGGTCGTGCGAGGGCGCGATCGATGGTAGCTGGATTAGGTAACAGAATTCA
AGGCGGCGGCGAAAGGGACGATCGCGATGAGATCGCGTCGACCGGCGCGAAGTCGAGCAGCGCGGAATCGATTCACATGC
CGCAGCAGCCGTCGACCGGAACGAACACCGGCCAGAACACCCCTGTGCAACCGAGAACGGCCAGTATTCGATCGCGTCCA
ACTTCCAGCAGGATCACCGCCGCGGAGCTCGAACGGCAGCAGGGTAGTGGCGCCGGCGGCCAGTACGGCTCGTCCATGAT
GAGCTCCTCTCACTTTCAGACTACCGGTCAATCTACCAAGTCGCATCCGTCGTCGCCCGCTAAGACCGGCAGGGTGTACG
CGAGCGTAGCGGAGATGAAGCGCAAGGGCAAATGGGTTAATCACACGGTAGTTTTGGATCATCACGCTTATGAGCAGGAA
TACGCTTCATCCTGGTGTCACGTTATCTTGTATACGTTCCCGTCTTTCGTCTACCGTTCTCTCCTTCGTCCCCTCACTAA
ACCCACTGTAAATCGCAATTCCGTCTTCACGCTCCGAGTTTTTCAAGTTTGGCAAGGCGACGCGAGTGTTGCGGTCGAGT
TTACAGTCTGTACGAGCCTGTTGTCGTTACGTTTGCAGTCGCACTCGAGAGTACGCTTCTTCGGCGGCTTGGGCGGTGGT
TCCGATCTCCACAGAGACTTCCACAGCACGCCGGATCTCAACGTGCAGGCGCAGTCGTCAGCCGCCCTTGTGCCCAAGAG
CCACAGAAGCCAGGAGGACGTGAACGCCCTGAACGGGAGAAACGGGCTTCCACCGCCGAACCATCCGCCGCCGCCCCCGC
CGGTCGGACAAGTCGTCAAAGTGAATGTCGGCGCCAATGTGCCGGACGTCGTTACGCCAGCCTCCGTTTACGACAACATG
GCGCACATTCAGCAAGTGAAAGAGTCTCGAATATATCCGTTACACACAGAACTCGCGGCGGCAACGGTGGAGGGTGCCTA
CGGAGTGATGTCGAGCTTCCGGCCGTCGAACAGCGCGAAGCTGTACGCCTCGCCGGAGGACATGAAGACCGTCGGCTACC
GTTCGCGCAGTCTACCGGCGAATCGCCCGCATCTCAGGAAGTCCCACAGCTTGCGCAACACACCGAGCAGCACGACGTTC
AAGCCCGGCACGACTGGCAGTCAGCAATCGTTGAACACCAGCATCGGCAATATGAACAACGGAAACGGTAACAATCAGTA
CGCGCAACCGTTGAAGACCAACAGGAGCCACAGCATAGCCGGTATTCGCGAGAGAAAGAAGAAGACCGTCGTCACCACCA
GCTCGTCCATCACGAATCTCTCGTCGATCGCGTCCGGCGCGAACGGAACATTCGCGCCGCCCTCCTCGGCGCCGCCGATC
CCCGAGCCAGATTACAGTCTGTCGGAATCGGAGAACGACGACGAGGACGAGTCGGACGAGGACGGCGAATCGGAGATCGC
GAAGGAGCTGGAGAAGGCGGCGGCGCGAGAAAAACTGGAAGCGACTCGGGAGACGTCCGGCAATTCGAATACATCCGGCT
CGAGCTCGTCCGGCAGCGGCTCGCTGCCGCACTCGTTCAGCGTCGAGGAGATCCAGAAAGTACGCACGCAACTCAAATCC
TCCAAGAGTCATCCGAATGATTTTCTGCTACAGACGCAACAGTCGCTCGCCGAGGACGGTGACAACAGCTCGAGCGGCGT
CAGCTCGGACCAGGACGTGCCGGTGGGCCCGCCGATGGGCTTCGACGACACCGCCATGCGGAATCTGGCGAATCAAGAGA
GCAATCAGCACTTGCCGTCGGGAGGCGCGTCACTGCTCACCGGCGTCAGTCCGGTTGAAAAGGAGGCCAGTCAGACGAAA
CGGCCGGGCTACGGCGGCAGCGGACTGCTCACCAGGCACGCAGTCAGCCTGGCGCAGCTGCCGCCGCCGATCGAAGCCGA
CGCCGAGGAGCAAAACAACGATTTGTTCGTACCTCCCCCGCCGGAGTTCAACGCCGGTCCATCCGCCGCCGGCGGCCAGG
ATCAGGAAGTGGTGGTGTTCGCGCCGCCGCCGCAGTTCTGCGACAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAAGCCGCTGCGCAGAACCGCGTCAAGATAATCGGCGCGATTCCCAAGGTTGCCGGGAACCAAGTGAAGGCGTCGGG
CGGACGGTTGCAGTAA
PEP:
>LH18404-PA
ELKESFNYGLFCPPVNGKAGKFLDEERRLGDYPFNGPVGYLELKYKRRVYKMLHLDEKQLKAMHTRTNLRRLLDYVQSSQ
VEKIAKMCSKGLDPNFHCQETGETPLTLATTLKKPSKVIIALVNGGALLDYRTKEGLTAMHRAVERNSLEAVKTLLELGA
SPNYKDTKGLTPLYYSVIYKTDPMLCETLLHDHATIGAQDLQGWQEVHQACRNNLVQHLDHLLFYGADMNARNASGNTPL
HVCAVNNTDASCIRQLLFRGAQKDALNYANQTPYQVAVIAGNMELAEVIKNYQPEEVVPFKGPPRYNPKRRSVAFSGTTS
MTMTTSCSASNLGTLTRIPSTEQHAAASSAGGGAAAGTLTRTVSVEQYSSITRVPSAEQYATAAAAAAAAAVSLSRVPST
EQPSYPTAAPSSGTLVRIVSEEKYAPPGAVLSRASSGERYDATLTRVPSTEQYPAAAAGLSRVPSTEQYPSTGQSTESSH
HGSLGRVPSVESSRNDLPRIPSEQNGHRLTSEYQSPNSLRDPNARLPSAAENYSNLRMEGLTRLQEHRLELQHRLDMHRS
QMEMPPSPSPSSRSLAPFSSASSSLSEGSNQPSGEDSASIVTDKSLGDTASDVISDSSGVGTSQSDTTNSLSIPGTTVVC
VESYNSGITGHLTINQGDILEVTGATDCGLLEGILRGQGTGLFPAHCVQEVRLRHTNIPLGPQPARDPRNRVLGRRESQH
KYFATAPRLKKPVTSEPRTVVLHRSRKGFGFVLRGAKATSPLMELTPSARYPALQYLDDVDQGGVADLAGLRKGDFLIQI
NGEDVTTASHEHVVDLIRKSGELVRMTVVSPVISLPNSQSAAALPTSQPIQRQYATLPRKGNNNVVIGGTLGRSPAPMPP
RRDPKTTLSVGRARARSMVAGLGNRIQGGGERDDRDEIASTGAKSSSAESIHMPQQPSTGTNTGQNTPVQPRTASIRSRP
TSSRITAAELERQQGSGAGGQYGSSMMSSSHFQTTGQSTKSHPSSPAKTGRVYASVAEMKRKGKWVNHTVVLDHHAYEQE
YASSWCHVILYTFPSFVYRSLLRPLTKPTVNRNSVFTLRVFQVWQGDASVAVEFTVCTSLLSLRLQSHSRVRFFGGLGGG
SDLHRDFHSTPDLNVQAQSSAALVPKSHRSQEDVNALNGRNGLPPPNHPPPPPPVGQVVKVNVGANVPDVVTPASVYDNM
AHIQQVKESRIYPLHTELAAATVEGAYGVMSSFRPSNSAKLYASPEDMKTVGYRSRSLPANRPHLRKSHSLRNTPSSTTF
KPGTTGSQQSLNTSIGNMNNGNGNNQYAQPLKTNRSHSIAGIRERKKKTVVTTSSSITNLSSIASGANGTFAPPSSAPPI
PEPDYSLSESENDDEDESDEDGESEIAKELEKAAAREKLEATRETSGNSNTSGSSSSGSGSLPHSFSVEEIQKVRTQLKS
SKSHPNDFLLQTQQSLAEDGDNSSSGVSSDQDVPVGPPMGFDDTAMRNLANQESNQHLPSGGASLLTGVSPVEKEASQTK
RPGYGGSGLLTRHAVSLAQLPPPIEADAEEQNNDLFVPPPPEFNAGPSAAGGQDQEVVVFAPPPQFCDNKQQQQQQQQQQ
QQAAAQNRVKIIGAIPKVAGNQVKASGGRLQ
Swiss-ProtSH3 and multiple ankyrin repeat domains protein 3
KEGG     K15009  SHANK; SH3 and multiple ankyrin repeat domains protein     
SUPERFAMILYSSF48403  Ankyrin repeat superfamily     
Gene3DG3DSA:2.30.42.10     
PfamPF00595  PDZ; PDZ domain (Also known as DHR or GLGF)     
SMARTSM00326     
ProSiteProfilesPS50297  ANK_REP_REGION; Ankyrin repeat region circular profile.     
OrthologiGroup-00296    SH3 and multiple ankyrin repeat domains protein     

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