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Gene detail [Fasta]

Species Linepithema humile
GeneLH23760
Positionscf7180001005065:1686..10019[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH23760
sequence mRNA:
>LH23760-RA
ATGGAAACTTTGCAAAACACGGGAGCTTTTCGTCCCAAAGCGAATAACAAAAGAAATCCAAATCAAGAGGCCAATGCTCC
TGGAGAAAATGCATTGGGAAGATTATTGGAAATCAAAGAGGACATTAGGATTGATGGTGTGTATGGATTTCGAAGAGTTA
CTGATTCAAGAGAGAGAATAGGATTTTTGCTAAACATGCATGCGACTGACATTGTGGAAGATGATAAGCGTATGTTAAGT
GGTGTGGATTATTATTTCATAGAAGAAGATGCAACGAGATTTAAAGTATCCTTGCCATATTCACCATATTTTTACATTTT
ATGTCGTAAAAATACCTTTGAAGAAGTGTCAACGTTTTTATCTAAGAAGTATACAGGAATTTTGGTGAAAATTGAAACTA
TTTACAAAGAAGATCTTGACTTGCCTAATCATTTGATTGGTTTGAAACAAAAATATCTGAAACTTTCGTTTGCAAATACA
ATTGATTTAATAAAAGTTAAGCGCGACATTATGTGTGTTGTTAAAGTCAATAAGGAACGAGAGAAGAGTAATACTTATTA
TACAGACATGCTAGCAACTACGTTGCAACCAACTGAACAAGATAACAGGCAAATTTTAGATCACATGGATAACATTCTTG
ATATTAGGGAATATGATGTACCTCATCACATTCGAGTGTCTATAGATGCTAACATATTTTGTGGAACTTGGTACTCTGTA
AAGACCAGAGGTAATGAACCACCTGTTATTGTGCGAAAAGAAGACATGATTGAACCACCTGAGCCTATTGTGTTAGCATA
TGATATTGAAACTACAAAACTGCCATTGAAGTTTCCAGATTCTAGTTTTGATCAAATTATGATGATATCATACATGATAG
ATGGACAGGGCTACTTGATAACAAATAGAGAATTGGTCTCTGCAGATATACAAGATTTCGAATATACACCAAAACCAGAA
TTTGAAGGTCCCTTCACAGTGTTTAATGAGCCTAATGAGAAAGCAGCAATAACAAAGTTTTTTGATCATATCAATGAAAT
AAGGCCGCATATATTTGTAACGTACAACGGTGATTTCTTCGACTGGCCATTTGTTGAAGCTCGAGCAGCTGTACATAATA
TGGACATGAAAGAGAGGATTGGTTTTTCTAAAAACCGTGATGATGTTTACGTCAGTAGAGCTGCTATGCATATGGATTGT
TTGTGTTGGGTAAGACGTGATTCTTACCTCCCGGTGGGCTCCCAAAACTTGAAAGCTGTTGCTAAAGCAAAATTGAGATA
TGATCCTGTGGAGCTCGATCCTGAGGACATGTGCAGATTAGCATCAGAAGAACCGGAAGTACTTGCAAACTATTCCGTCT
CTGATGCTGTAGCGACATTTTATCTCTACCAGAAGTACATTCATCCTTTCATATTTGCGTTATGTACCATTATTCCTATG
GAACCCGACGAAGTACTCAGAAAGGGATCCGGCACACTGTGCGAATCGCTTCTCATGGTACAGGCTTTTGAAGCTAATAT
TATATTTCCTAACAAACAAGAAACCGAGCTGAATAAATTGACAAAAGATGGCCATTTGCTGGATCAAGAAACTTACGTAG
GCGGACATGTGGAAGCTTTAGAATCAGGCGTTTTCAGAGCTGATATTCCTTGCCGCTTTAAAATTATACCAAGCGCTGTA
AATGAATTAATCAGCGGTGTGGAAAACGCCTTAAAACACACGATACAAGAAGAGGAGAAAGTGCCACTTGAGATGGTTAC
GAATTTTGATGAAATAGTGAACGAAGTCAAAGGAAAATTGGGGGAACTCAGAGATCAGCCACTGAGATTGGAAAACCCTG
TAATTTATCACTTGGACGTAGGCGCTATGTATCCGAACATTATTTTGACTAATAGATTACAACCTTCCGCGATAGTGAAC
GAAATGGATTGCGCAGTATGTGATTACAACAAACCCGATGCTCTTTGCCAAAGAAAGATGAAGTGGATGTGGAGAGGCGA
ATATCTGGCTGCAAGTTTGGGTGAATATCAAAGAATAAAGCAACAATTGGAGACCGAAAAATTTCCACCGCAATTCCCTG
GCGGTCCTAAGAGAGCTTTTCACAAATTAACAACAAAGGAGCAAGCTGCATTTCAGAAAAACAGGCTTACAGAGTACTGC
AAAAAAGCTTACAAGAAAGTCAAAATTACCAGAATGGAAGAGAGAATGCAAACAGTCTGTCAGAAGGAGAATTCGTTTTA
TGTAGACACCGTGAGGGCATTTAGAGATAGAAGATACGAATATAAAGCGTTAACTAAAGTCGCCAAGCGACAAGTAGCAT
CGGCAGTCGCGAAAGGCGACGCGGGTGACATAAAATCTGCCAAGAATAGAGAAATTTTGTACGATTCTCTACAACTCGCT
CACAAATGTATCCTCAATTCTTTCTATGGCTACGTAATGAGAAAAGGAGCACGATGGCACAGCATGGAAATGGGAGGGAT
TGTATGTTACACGGGAGCTCACATTATCATGAAAGCTAGAGAAATTATAGAACAGATCGGCCGCCCACTCGAGCTGGATA
CCGACGGTATATGGTGCATATTGCCTGCATCTTTTCCAGACTCAATTGTAGTTCACACAACTCATGAAAAGAAACCGAAA
TTTACGATTTCTTACCCGAACGCGGTTCTTAATTTCATGGTGAAGGATCAATTTACCAATGAAGTGTATCACGAGCTTGT
GAGTAAAGATGATTTAACGTACGAGATTAAAAATGAGAATTCCATATTTTTCGAAGTCGACGGTCCGTATCTGGCGATGG
TATTGCCGGCTGCCAAAGAAGAGGGAAAGAAATTGAAGAAGAGATACGCGGTTTTTAATTTCGACGGTTCGCTCGCCGAA
CTGAAAGGATTCGAAGTGAAAAGGAGGGGTGAGCTGCAGTTGATAAAAATCTTTCAGGCTTCCGTTTTTGAATCTTTCTT
GAAGGGCAACACGCTGGAAGAGTGCTACGCTTCGGTTGCAAAGGATGCGGATTATTGGTTGGATTTGCTTTACAGCAAGT
GCGCGAACATGCCCGACTCTGAATTATTCGAACTCATATCCGAGAACAAATCTATGTCGCGCAAGCTGGAAGACTACGGC
GCTCAGAAATCAACGTCTATTTCCACGGCTAAAAGATTAGCCGAATTCTTAGGCGACGAGATGGTCAAAGACGCGGGTCT
CGCTTGTAGATACATTATAGCGAATAAACCGCAAAGCGCGCCAGTTACCGAACGCGCGATACCGTTGGCGATCTTCCAGT
CGGAACCAGCCGTTCGAAGGCATTATCTGAAAAAATGGTTGAAAGATCCCACTTTGTACAGCGACGACATAAGAGACATC
TTGGACTGGAACTACTACATCGAGCGACTTGGGAGCGCTATTCAAAAGATAATCACTATACCGGCAGCGATGCAGGGCCT
GCCGAATCCAGTTCCCCGGGTGCAGCATCCGCCTTGGTTACTTAAAAAAGTGTCAGAGAAGAATATGTCTCATCGTCAGA
AGAAGATCACGGACATATTCGCCGTAACAGCTAGAGAGACGACTGCTCAGAACGCCGGAGGGCCCCGCGATATCGAAGAT
CTCGCGGTACCGTCAACCAGCAGCAAGAATCCGTCACTTCCGATCGTCAGTAGAAGAAAAAGGCAGCGTCCGGAGGACGA
CGAAGTGATCAGAGCCAAAAGTTGGAAGGAAGCTCTGGGTTCACCACCTCCCAGGGGATCGACGAGAGAGGAGAGGATGA
AATGGTTGGAGTTTCACAAGAAGAAATGGGCCTTTCAGGCCAGACAGAGGGATCAGCATCGGCGGAAGAGAAGCCGAACG
GGTGAGAGCGACGGGATCCCCTGGGGAGTTATACGAAACACAAACACGTCGACTATGACCGGCTTTCTGAGACGCGCTCA
GAGGAAATTGCTCGAGACTCCTTGGCAGATTGTTCAGCTGTCGGAGAGCGGCGAGCCGGGCATGTTTCGACTGTGGATAC
TGGTCGACGCGCAACTGCACCAGGTGCGTCTCGTGGTACCGCGTGTGTTTTACGTGAACGCGCGCAAAGCGAGGCCCGAT
CCGGGGCCCAATGCGCTCTGGAAGAAGAGCTTCAAGTCTTTACCGCGTTCGCGTCCGGTGTACAACTTGTATCAGTACTC
GTTGCCGGAGTCTCTGTTCCAAGAGCACAGTCGGGAGCTCCTCGCGGATCTGAGTAAACCAGAAATCGAAGGGATCTACG
AGACGCAGGTGTCGTTGGAATTCCGAGCGATAATGCAACTGGGATGCGTGTGCGCGGTCGATCCGCGTGCCGCGCGTAGA
ATGGCGGACGGCGCCGACACCTTCACCTTGGATCAGCTGGAATTCAAGAGCATCGCCGTCCAGCATTACTTCAAAAGAGC
CGAGTCGATCAACTACATCTTTCTTTATCACCACTGGAGCTCGAATCGTCAAAGGGCGTTGTGGGGCTTGTTTTTGAACG
CCAGCAGGAAAAGTCACATATTCGTCTTGGATTCGGTGGCTTCCAATCAACTGCCAAACATGAATGTGTTGTACTCGCAG
GAGCGCAAGGCGACGTTGGAGAAAAACGGCGAGGAGAAGATAAGCAGATTGCCGAAAACTATGCAGTTCACGATACAGAC
GGAAACAAGCTTTCAGCAGGTGTGCCGCACGCTGCAAACGGCTTTGACGACGTACAAGAATGAGAGCCACGGCGCCACGA
TTATCATTAATCAAACCGCTCTCGACAGGACGGCGCTGACGACCGAGATGCCGCTGCTGAATGAATTCCCTCTCGTCAGC
ACGCACGTGCGAGACGTGGAAAATCTGTACGGCACGTTGGAGTGGCAGAAGGTGGGGGCGAAGATGATGGTCAGGCACTA
CCTGAAGAGCCAGCAGATCGTCGAACTGATGATAGAACAATGCCGCTTCTTCCACGCGCCTATCGGCAACGTACCCATAG
ATCCCACCCTCTTCGGCGCGGATCTGTTCTACGCCAGGCACTTGCAGAGGAACAATTTCGTCCTCTGGTGCTCGCCGACG
GAGAAACCCGACTTGGGCGGCAGCGAGAACGACGATAACAGGCTGCTGACGGACTTTGAGGAAAGTTCGAGTTGCGCCGC
GAACAACTCGGGCACGTATTCCAGCGTATGCGTGCAGCTGGACGTGGAAAGCTTGGCGATCAACGCGCTGTTGCAATACT
ACCATATTCACGATGTAGATGGAACCAATACGTTTGTGACGTTCCACAATCAACAGCGTCCGTCTGTTCAGCGACGGGGG
ATACCGCGACAATTATTCCCAGCTACGACGAAAATCACTCTGTGCAACCCAGCGTTTAAAACATTGCGAAGCATGGTGAA
TGCGTGGTTGCTCGAAGTGTCGCTTTACAAAAACGTATTCGCAGATTATCAGTTGATCCACTTCTATCGATGGCTGAGAT
CTTCGAATGCTTTGCTTTACGATCCTGCTCTGCGTCGCACTCTACACACTTACATGAAAAAGTTATTCATACAATTGATA
GCAGAGTTCAAGACATTAGGTTGCATCATAGTGTTCGCAAATTTTAACAAAGTCATTGTGTGCACAAAGAAGAGATCCGT
GAGCGATGCTTTAGGCTACATAGAATTTGTTGTTCAAACTATAAGGAACAAGGAATTGTTCCACAGTATCGAAATTACGT
ACGATCAATGTTGGGAATATCTAATATGGCTTGACTTGCACAATTACGCTGGTATTAAGGGGCAATTATCAAAGCATAGA
AACGATGATACCAGAGAAAATGAGAATACTGCAGACGATACTGATGACACGCCTCAAATAGTAATGAATTGGAGCTTGAT
GGAGTGCCTGCCACAAGAAGCGGGATGCCAAGCGAGTTTCAATGCTGTGACAGCAGGATATATAAACGCAGTGTATCAGT
GTATGATGGAGACTGAAACGAATAATACTGTAAGGCCGAGAAGACAGAGCCAAAGTCAGTCGGTTGTAGGACCGCTTGGT
TTAGGCGCATTGGAAAATACGGCGGAGTTTGCGAAGAAATTAATATCAGGAGAAATGTCCCAAAAATTATTCAAAATAGC
GCAAAAGATACATCGGAATTTGCCAGAAAAAACATTAACGCTCAAAGAATATCCCAATTTGGATATGGGTGGAAAAGAAA
GTATAAAGATTAACCCCGCTCTTGAATTAATCAAAGCAATATGCAAGGTTTTATCTCTGGACAAAGTTGTAGAACATGAA
GTTTTTGACTTGAAAGCAAATCTATTACGGCTGATTGGAGTTGGCAGCTACGGCGATAATGTCGAGTGGAAGGAACCATG
CATCTCTCTCATTCTACCGGAAATTATATGCAAAGCGTGTAATCACACGAGAGATATTGATCTTTGTAAAGATCAACATT
ACACAATTGAAAATAACAGGCACATGTGGAAATGTCCTTTCTGTGATACTTCTTACGATAATACGGAAATAGAATTTTTA
TTAATTGATAAATTAAACCGCAAAAGCATGGGTTATATATTGCAAGATCAACAATGTCGAAAGTGCAAGGAAATTAAGCG
AGAAAATATGAACCTGCTGTGCTCTTGCTCGGGCGAGTACGATAATTTAATCCCGTATGACGAGATCACAACGTTTACAA
ATATATGTAAATCAATAGCCAACAAATGTAAAATGAATCTTTTGGCGGAGATAGTGGACAATACAAAACTCTTCGCAAGT
TAG
PEP:
>LH23760-PA
METLQNTGAFRPKANNKRNPNQEANAPGENALGRLLEIKEDIRIDGVYGFRRVTDSRERIGFLLNMHATDIVEDDKRMLS
GVDYYFIEEDATRFKVSLPYSPYFYILCRKNTFEEVSTFLSKKYTGILVKIETIYKEDLDLPNHLIGLKQKYLKLSFANT
IDLIKVKRDIMCVVKVNKEREKSNTYYTDMLATTLQPTEQDNRQILDHMDNILDIREYDVPHHIRVSIDANIFCGTWYSV
KTRGNEPPVIVRKEDMIEPPEPIVLAYDIETTKLPLKFPDSSFDQIMMISYMIDGQGYLITNRELVSADIQDFEYTPKPE
FEGPFTVFNEPNEKAAITKFFDHINEIRPHIFVTYNGDFFDWPFVEARAAVHNMDMKERIGFSKNRDDVYVSRAAMHMDC
LCWVRRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCRLASEEPEVLANYSVSDAVATFYLYQKYIHPFIFALCTIIPM
EPDEVLRKGSGTLCESLLMVQAFEANIIFPNKQETELNKLTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIIPSAV
NELISGVENALKHTIQEEEKVPLEMVTNFDEIVNEVKGKLGELRDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIVN
EMDCAVCDYNKPDALCQRKMKWMWRGEYLAASLGEYQRIKQQLETEKFPPQFPGGPKRAFHKLTTKEQAAFQKNRLTEYC
KKAYKKVKITRMEERMQTVCQKENSFYVDTVRAFRDRRYEYKALTKVAKRQVASAVAKGDAGDIKSAKNREILYDSLQLA
HKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIMKAREIIEQIGRPLELDTDGIWCILPASFPDSIVVHTTHEKKPK
FTISYPNAVLNFMVKDQFTNEVYHELVSKDDLTYEIKNENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAE
LKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYASVAKDADYWLDLLYSKCANMPDSELFELISENKSMSRKLEDYG
AQKSTSISTAKRLAEFLGDEMVKDAGLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYSDDIRDI
LDWNYYIERLGSAIQKIITIPAAMQGLPNPVPRVQHPPWLLKKVSEKNMSHRQKKITDIFAVTARETTAQNAGGPRDIED
LAVPSTSSKNPSLPIVSRRKRQRPEDDEVIRAKSWKEALGSPPPRGSTREERMKWLEFHKKKWAFQARQRDQHRRKRSRT
GESDGIPWGVIRNTNTSTMTGFLRRAQRKLLETPWQIVQLSESGEPGMFRLWILVDAQLHQVRLVVPRVFYVNARKARPD
PGPNALWKKSFKSLPRSRPVYNLYQYSLPESLFQEHSRELLADLSKPEIEGIYETQVSLEFRAIMQLGCVCAVDPRAARR
MADGADTFTLDQLEFKSIAVQHYFKRAESINYIFLYHHWSSNRQRALWGLFLNASRKSHIFVLDSVASNQLPNMNVLYSQ
ERKATLEKNGEEKISRLPKTMQFTIQTETSFQQVCRTLQTALTTYKNESHGATIIINQTALDRTALTTEMPLLNEFPLVS
THVRDVENLYGTLEWQKVGAKMMVRHYLKSQQIVELMIEQCRFFHAPIGNVPIDPTLFGADLFYARHLQRNNFVLWCSPT
EKPDLGGSENDDNRLLTDFEESSSCAANNSGTYSSVCVQLDVESLAINALLQYYHIHDVDGTNTFVTFHNQQRPSVQRRG
IPRQLFPATTKITLCNPAFKTLRSMVNAWLLEVSLYKNVFADYQLIHFYRWLRSSNALLYDPALRRTLHTYMKKLFIQLI
AEFKTLGCIIVFANFNKVIVCTKKRSVSDALGYIEFVVQTIRNKELFHSIEITYDQCWEYLIWLDLHNYAGIKGQLSKHR
NDDTRENENTADDTDDTPQIVMNWSLMECLPQEAGCQASFNAVTAGYINAVYQCMMETETNNTVRPRRQSQSQSVVGPLG
LGALENTAEFAKKLISGEMSQKLFKIAQKIHRNLPEKTLTLKEYPNLDMGGKESIKINPALELIKAICKVLSLDKVVEHE
VFDLKANLLRLIGVGSYGDNVEWKEPCISLILPEIICKACNHTRDIDLCKDQHYTIENNRHMWKCPFCDTSYDNTEIEFL
LIDKLNRKSMGYILQDQQCRKCKEIKRENMNLLCSCSGEYDNLIPYDEITTFTNICKSIANKCKMNLLAEIVDNTKLFAS

Swiss-ProtDNA polymerase epsilon catalytic subunit A
KEGG     K02324  POLE1; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]     
SUPERFAMILYSSF53098  Ribonuclease H-like superfamily     
Gene3DG3DSA:3.30.420.10     
PfamPF03104  DNA_pol_B_exo1; DNA polymerase family B, exonuclease domain     
SMARTSM00486     
OrthologiGroup-00195    DNA polymerase epsilon catalytic subunit A      

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