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Gene detail [Fasta]

Species Linepithema humile
GeneLH19905
Positionscf7180001004978:46960..51043[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19905
sequence mRNA: 
>LH19905-RA
ATGGCAAATGATGTTCTTAGCAACGGTCGTTTAGCGGAAAGCGCGGTTGTACAACGGACAAGACACGACAGAGGCAAAAA
AGATAATAACATAATAACATTCGTCATTCCTTACCGTTTGTTGTTCGGCACAGCTCCAGATATACCAGCTATAGAAAGCC
GCAACTGGTTATTACATCGGCATTATATTCGACACGAGTACAGCGCCTGTAAGCTTCTTATCGAACAAGAATTAACAAAA
TCAGATGGCCACGAATACGCGAATTACTTGAAGGGTTTAATTCTCAGAAAAGAGGGCAAAATTCAAGATTCGTTAGATTG
TTTTCAGACCGCATATAATGTGAATTCGACGAACATTGATAATGTTAAACAGATAGCAAAGTCGTTATTAATAATGGGAA
GTCATAAGCGCGCGATAGATGCTTATACGGAAGCCGAGAAGATATCGGCCCTGCCGGATTGGGAGATATATTACGGCGAG
GCTTACATAAAATTGAATCAGTTACAAGAAGGTAAGAAACATTTTAAGAAATCGACAGAATTAACGAAAAATGAGCTGCC
CAATCTCGCTCTCGCGAGGCTTTACCTCTTAGATGACATGATTCCAGAAGCAAGAACTGCTTATACTGCAGCTTTGAACG
GAAATCCCGAGAGCACCGACGCGGCAACAGAACTGGGTCTCTTGTATCTCAGGATTGGAGATACGCAACGGGCGTTTCAG
CAATTTGGAGCAGCTTTGGCTCAATCGCCTAATTGCGTCAAAGCAATTTTGCCTATGGCTTATATAATGCAAAATCATAG
AGAGTACGACGTAGCCTTATCAAAATACAAAGTAGCAGCACAAACTATTCCAGAGTCTTCAGCTCTTTGGAATAACATTG
GAATGTGCCTCTATGGAAAACAAAAATATGTTGCAGCTATTAGCTCGTTGAAGCGAGCGCATTACCTGAACCCGATGTCC
TGCGTCCCGTCTTGCAACTTGGGAATCGTTTTTCTTACCACTGGGCAGCCTGCATCAGCTGCGATTTATCTGTGCGCCGC
CGTCAGCGCTGAACCAAAGAATCCTACGCCGTATCTGTTACTAGGTCTGGCTTTGAAACGTTTGGACGATTTGGAGGGCG
CTGAAAGGTCTTTAACAAAAGCTCATGCCCTAGCTCCTCAAGATCCACTGATATTGATTAACCACGCAGTGATTCTCGAT
GCTCGTGACAAACAAGCTAATGCTGCTGAAATTTTAACAGCACTCAATGACATTATGGCTGTTGTCGACGTCGATATACA
GATATCGCAAATGGCGAAAAAATTATCAAAGAAATTTCAACGCGAGAAAACAGAATTAAATAGCGCTCAAGAGCCGACGG
ACGGCAGTGAACAGCAGCGACAATTGAGCGCTGACGAAGTTTAA
PEP: 
>LH19905-PA
MANDVLSNGRLAESAVVQRTRHDRGKKDNNIITFVIPYRLLFGTAPDIPAIESRNWLLHRHYIRHEYSACKLLIEQELTK
SDGHEYANYLKGLILRKEGKIQDSLDCFQTAYNVNSTNIDNVKQIAKSLLIMGSHKRAIDAYTEAEKISALPDWEIYYGE
AYIKLNQLQEGKKHFKKSTELTKNELPNLALARLYLLDDMIPEARTAYTAALNGNPESTDAATELGLLYLRIGDTQRAFQ
QFGAALAQSPNCVKAILPMAYIMQNHREYDVALSKYKVAAQTIPESSALWNNIGMCLYGKQKYVAAISSLKRAHYLNPMS
CVPSCNLGIVFLTTGQPASAAIYLCAAVSAEPKNPTPYLLLGLALKRLDDLEGAERSLTKAHALAPQDPLILINHAVILD
ARDKQANAAEILTALNDIMAVVDVDIQISQMAKKLSKKFQREKTELNSAQEPTDGSEQQRQLSADEV
Swiss-ProtBardet-Biedl syndrome 4 protein homolog
KEGG     K16531     
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13414  TPR_11; TPR repeat     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     
OrthologiGroup-00578    Bardet-Biedl syndrome 4 protein homolog      

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