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Gene detail [Fasta]

Species Linepithema humile
GeneLH10019
Positionscf7180001002155:4291..11322[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH10019
sequence mRNA: 
>LH10019-RA
ATGTCGACAGTGACCAATTCGCAGGATATAACCAGGATAAAAGAAGTATTGGAATTGGTGAAACTTCTTCGTCAGAATGG
CGATAAGGTTTTGAGTGCCTCCAGCAAACTCTCTTTGTCTACAAAACTGTTGCACAGCCTCAACGAAGCATTCTCGCTGA
TTGTGGTAGAATCCGAAGATCTGAATTCTTCGTTTCACGTGTGTAACAGCTCCAAGATAGATATATTCCACGATGTAAAG
TTTCTACATGATTTTGTGCAAAAGACTATCGGTTTAAAAGTGACACATTACTCTCCTGACGTCAAAGTTCCCATCGATAT
CTCCAAGTTCAGACATTTAAAATATTTGGAACTAAGGAAAGTATCCATTGAGTTACTGAAGGGTCTACAGAGCATCAGAG
GTCAATTGGAGAGCATTGTGTGCACCGGTGGAAAGAGTGTATCCACAATTAATCAATTACTAGCTACATGCGGAGGTGAT
ACTGATGTTGGATTTGTATGGACATCTTTGAAACATTTAGTGTTGCCTCATAATGCTCTCGAACACCTAGATAAATCATT
AGAGTTAGCGCCTTGGCTTCAGATATTAGACTTGAGTCATAATATAATTACTAATGCTAAGGAGATATCCTGTTTATCAA
ACTTGAAGCATGTTAATCTGAGCTATAACAAACTAGAACAAGTATCTATATTCAATAAGACAGTGTCACATTCACTGCAA
GTGTTGGTATTGAAGAACAACTACATTGACAGTTTAAATGGTCTTCAAGGTTTGGAATCTTTGACAGAGTTAGATTTATC
ATATAATTGTTTAATGGAGCATTCAGTCCTCTGGCCATTGCAACGAATGTCTTTTCTATTATGGGTATCCTTAGAAGGAA
ATCCTTTATCGTACCATTCAAAACATCGCTTGTTATCTATAAAACATTTCCATCCAAGTCTGTCGAACAGCAAGGTATTA
TCACATAATTCAAGTAAACTCTCACAGTTTGTTTTAGATCATCTGGCACTTTCGAGAGCAGAGAGGGCGATGATCGCAGA
AAATCGAATCTTTACGATATGCACAGACACCTCCTTGAGCAGTTCGATATCCATAAATCTTTGCGAATCTGATGAAAACG
GATCGAATCATGAAGCAATATCGCTACCAAAGACTCTGGAAAGAAGCGTAACGAGGAGTAAGAGGAGGTCGAACGTGAGA
GAAGCAATTATTGCTGAAATCGATCATGAAAGGGAAGAATCTAAAACGTTGTCTGATAACGAGATTTCTCACTTGGAGTC
GTCACAGAATCATTTGGAGACAAAGAAACGCATCTTAGCTTTGCGAGAAAAATTTGGCAAGGCCAATTGGCTGAGCAGTC
ACGCGGGGACATTCATTCAGGACATTATGGGTCTGCAGTCTGTTTCACAACTTTCGACATCGCCAATACAGACCTTGGCT
GACATTGATACAGCCTCATCTTTTCACGACACCTTGATTTCTGCGATGGATAATGTAAAGTCTTCCGGTGAAGTCGAATC
GCAGCCGGAAGTTGCGGAATATGCGGATGACGATAAAGAAGTTTCTCAAGACGAGGAAATCTCGGCTGAACATTCGGAAT
CGCATTCTCCTCCTTCTGTGTACGATCCCGACGAAGAGACTGGAGATTTATACATCGTTCAAAAAAGAAAGAATGACGAG
GAGATGGAGGATATCTTCCTCGTAATAACTACCGAAGATATCAAGGAGAGAGACATGATTACTGGAAAGGTAAAGTTCTG
CTGGTCGACGAAGGCCATATTGTCCTGCGTCTTAGGTAGAAGCGATCCACCCACAGTTGACATTATCTTTGACACCACGA
GGAAAGATAGAGAGAACAGGCGGTACCTCACGGAGCTAGAAGATGCGAAGAAAATCGTGTCGACGATCAGCAAGCAGATC
GAGTTGCGGCCGATAGCGTTAAAAGTTTTCAAATGCATGAAATGCTCGACACAGTTCTCTCAGGATGCAGAGTACGTGAT
GCTTACCGTTAAGTCGACGACAGCGAAACAATTGAAATGTCCCATCTGCGACAGCAGCTTGGTCATCGAAGTGGAGGCTC
CGTCTAATGTAGACACTGTAAAGAATCAGTCGTCGAATAATTCCACGGAAATTAATCTGCAACATTCTGAATCGTTCTCT
AGCATCGGTTCAGCAACAAGTTTGGAAGAGTCGAGAGAATTTACACCGTCTAGGAATGTCCCGGTGAAGAAGTACGAGAG
CGATATAGAGATACTCAGCAATCCGAGCCAGAGCAGCATCGAAGTTTTAGACGAAACGCTGAAAGTGAATGTGACTCCAA
GTCGAAAACGTTCGACAGAGGAAAAGGATACGGCGCTTCCTCCTTCCTTGATAACGATTCCGGATGCAGCATCGGTTATG
GCAGGCTTGACGGAAAGTAGTTCTTCAGGCTCGCTGACTGAGAGCATATGCACAGCGTACGAAAATAAAATGGCTAAGTC
AATGAACATCGATGCTAAGTCTCACAGCAGCGATAGCGAAAAGGAAATTGCGTTTTCGCCTGTGACAAACTTGACGTCGA
TGTTGGGAGGCTTGCTCCAGAGCATCAAGATCAACAGCAACAAAACGTTGAAGGGCCAGGAAGCTTCAAACTTTTTCAGC
AGCAACGTACAATACTCGTATACAGATTTCAGTACTGTGGATCACAGAATCAAGCTACATATCGTTCTGAATGTTTTCGA
TCATGAAAACGAGGAGCTAGTTTTTCTTCTTAGGGCGGAGATTTTGATGCATTCTATGCAGGAGACGTTTCCTGGGTGTT
TAGTATTGTCTACATCTAAGGTTTACGTTCTTAGGATTGATGGATCGGAAGGGGAGGACCCACAGCGCTGGCTGCACAAG
GAAATCAGTTGGACGACGGACAGACTGAGATCTTTCGTACCGCTGCCGTTCAAGCAGGGTGTCCTGATCGAGCTGCAACA
GCCTGGCAAGAGCACCGGCGAGGAGCATCTCACTTCCGAACTCATGATGCCATTCCTGCTGACAGATCTGCAGTTGCCTC
CAAGCTGCGAGGTGGAGTTCTCCGTTCCGGAGTATTACAGTACCTCGATGCACAATCTGTTAACGAATACTGCCAATTAT
CAGACCGGGGATGTTGTGCGATTGCTGGCGATGTTTTCCTTCGCGGTTCTGAAACACCGAAACGTCACCACGAAGCTGAA
GCTGTCCGGATTGATACTGACGGGTTTGGCATTGGTGATACTGGAGGACAATAGTCAGTGGCTGATACCAGGCAGCGATC
AAGCGCCTCTGGTCGCTAGAGAGCAATCGATGAGCAATTTGATTGCGATAGAACACTACGACACTTCGCTGACGTTGAAT
TTCTTGGACGAGATCGCGGGGCTCGAGGAGAGCTGGAACTTGGAATTTGTTTCTCCAGCTGCTGTCGACGCTGTAATCAG
CTCTATACAGTCTCCGTGGGAAGAATTGTTCTCGATACCTCTGCAAGTAACGACGCGCGGTACACAAGATATTACACAGA
AAGTTTAA
PEP: 
>LH10019-PA
MSTVTNSQDITRIKEVLELVKLLRQNGDKVLSASSKLSLSTKLLHSLNEAFSLIVVESEDLNSSFHVCNSSKIDIFHDVK
FLHDFVQKTIGLKVTHYSPDVKVPIDISKFRHLKYLELRKVSIELLKGLQSIRGQLESIVCTGGKSVSTINQLLATCGGD
TDVGFVWTSLKHLVLPHNALEHLDKSLELAPWLQILDLSHNIITNAKEISCLSNLKHVNLSYNKLEQVSIFNKTVSHSLQ
VLVLKNNYIDSLNGLQGLESLTELDLSYNCLMEHSVLWPLQRMSFLLWVSLEGNPLSYHSKHRLLSIKHFHPSLSNSKVL
SHNSSKLSQFVLDHLALSRAERAMIAENRIFTICTDTSLSSSISINLCESDENGSNHEAISLPKTLERSVTRSKRRSNVR
EAIIAEIDHEREESKTLSDNEISHLESSQNHLETKKRILALREKFGKANWLSSHAGTFIQDIMGLQSVSQLSTSPIQTLA
DIDTASSFHDTLISAMDNVKSSGEVESQPEVAEYADDDKEVSQDEEISAEHSESHSPPSVYDPDEETGDLYIVQKRKNDE
EMEDIFLVITTEDIKERDMITGKVKFCWSTKAILSCVLGRSDPPTVDIIFDTTRKDRENRRYLTELEDAKKIVSTISKQI
ELRPIALKVFKCMKCSTQFSQDAEYVMLTVKSTTAKQLKCPICDSSLVIEVEAPSNVDTVKNQSSNNSTEINLQHSESFS
SIGSATSLEESREFTPSRNVPVKKYESDIEILSNPSQSSIEVLDETLKVNVTPSRKRSTEEKDTALPPSLITIPDAASVM
AGLTESSSSGSLTESICTAYENKMAKSMNIDAKSHSSDSEKEIAFSPVTNLTSMLGGLLQSIKINSNKTLKGQEASNFFS
SNVQYSYTDFSTVDHRIKLHIVLNVFDHENEELVFLLRAEILMHSMQETFPGCLVLSTSKVYVLRIDGSEGEDPQRWLHK
EISWTTDRLRSFVPLPFKQGVLIELQQPGKSTGEEHLTSELMMPFLLTDLQLPPSCEVEFSVPEYYSTSMHNLLTNTANY
QTGDVVRLLAMFSFAVLKHRNVTTKLKLSGLILTGLALVILEDNSQWLIPGSDQAPLVAREQSMSNLIAIEHYDTSLTLN
FLDEIAGLEESWNLEFVSPAAVDAVISSIQSPWEELFSIPLQVTTRGTQDITQKV
Swiss-ProtSerine/threonine-protein kinase 11-interacting protein
SUPERFAMILYSSF52075  Outer arm dynein light chain 1 superfamily     
Gene3DG3DSA:3.80.10.10     
PfamPF13855  LRR_8; Leucine rich repeat     
ProSiteProfilesPS51450  LRR; Leucine-rich repeat profile.     

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