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Gene detail [Fasta]

Species Linepithema humile
GeneLH20954
Positionscf7180001004995:2052534..2058194[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20954
sequence mRNA:
>LH20954-RA
ATGGCTTACCATGCTTTTATTTGGAGACTGTTGTTTGTGGCATGTAGTATACAGGCATTATGGGCCATATCGGAAGACGA
TCCGTTAGAATACATGAGCAAGGAGGAGAGAGAAGCTTTAAAGGAAGAAGCAAGGGATATGTTTTATCATGCATACAATG
CTTATATGGATAATGCATATCCCGCTGATGAACTGATGCCATTAAGCTGCAAAGGGCGATACAGAGGCTCAGAACCAAAT
AGGGGTGATATAGATTCTACATTGGGAAATTTTTCACTTACTTTGGTGGATACGCTAGATACATTAGTGGTACTGGGAGA
TTTGGAGGAATTCGGAAATGCAGTCAAACTTGTTGCTAGAGATGTAAGCTTTGATACAGATGTTATTGTTTCTCTATTTG
AAACTAATATTAGAATGCTGGGAGGTCTTCTCAGTGGTCATATATTAGCCGAATATCTACAGCAGAGGGCTGATATAATG
CCATGGTACAGAGGAGAACTTTTGGATTTAGCTAAAGATTTAGGATATAGATTTTTACCTGCATTTAACACAACTACCGG
AATACCTTATGGCAGAATAAATTTAAAACATGGTATGAAAGGAGTTCCTATGGAAGTATCGAGGGAGACATGTACCGCTT
GTGCAGGTAGCATGATATTAGAAATGGCTGCTTTGTCCCGATTAACGGGTGAACCAATTTTCGAGGAAAAAGCGCAGAAA
GCCATGGATGTTTTGTGGCGAATGAGACATCGTGGTACAGACTTGATGGGATCCGTGCTGAACGTAAACTCTGGCGACTG
GGTACGAAGAGATTCCGGTGTCGGCGCTGGAATAGACTCTTATTATGAATATTGCCTCAAGGCATATATTTTACTCGGCG
ATGAAAAATACTTGGGGCGTTTTAACAAGCACTATCAAGCTGTAATGAAATACGTCAGTCAAGGACCTATGCTACTGGAT
GTGCATATGCATAGACCGAACACTAACTCGAAAAATTTCATGGACGCTTTGTTGGCCTTTTGGCCAGGTCTGCAGGTCCT
GAAAGGCGACATCAAACCTGCTGTGGAGACACATGAAATGCTGTATCAAGTTATGCAGAGACACAATTTTATACCAGAAG
CGTTCACCACTGATTTTCAGGTGCATTGGGGACACCATCCACTGAGACCGGAATTTCTAGAATCGACGTACTTCCTGTAT
CGAGCCACAGGCGATCATTATTATTTAGGAGTTGGACGTAAGGTTCTCAAAAGTCTGCAAACGTATGCAAGAGTGCCGTG
TGGTTACGCAGCCGTGTCAGATGTTAGAACAAACAAACACGATGATACGATGGATAGCTTTGTACTGTCCGAGACATTTA
AATACTTATTTTTATTATTTACGGAACCAGGAGAATTGGTTTTAGACTTGGACGAATTTATTTTTACCACTGAGGGTCAT
TTACTGCCACTCACGCTTGCTTCTATAAGGACGAATGTTTCATCTGATTTCGAACGCATGGATATCGTGCACGTAGACGA
ATTTGACCGTACTTGCCCGAACAGTTTGCACTTATTTCCCGCATCAGTGAGACAACCTTTGAGGAATATGGTCGAAGACG
TGTGCCCAAGGCGATCGATTAAACGAAGATTAAGTGCATCACAGTTTCAGGCGAATAACTTGGAACATCTGAAAATGTTG
AGTGATATGGGAATAACAACTCTAACACTAGCAGATGGGCGGGTTCAGCTTTTACACACATTTTCTAATGCGAAAACACC
GCAGGATTCGGAGGAAGGATTACTGTTCATGCAGGAAATGGTCGAACTGAGTAAAATGCAAACCCAACAGCCGGAAACTA
AACCGCAAACCGTGACGTTTGTAAGACCTAACACGGACCCACCGGAAAAAGTTATGCTGTTAGCAGGACCGGCGCAGTTC
GGTCCTGAGTTACAGAGCTTCTATAAAATTATCGGGAAGGTGATATTCACATATCCACCCGCAGCTTGCACAGATCTGCT
CAACGCGGACAAATTGGCGGGCAAAATAGTGATCATGGATCGTGGAAATTGCATGTTTATAGAAAAGGCCCGAAGAATTC
AACGAGCCGGTGCGCTTGCCGGAATAGTGTTGGATAACGTTGCGGGTTCAAGCGCGGCGACTTCGCCCATGTTCGCAATG
TCTGGCGACGGAAAGGAGGTGGATGACGTCACGATACCCGTCGTGTTCCTCTTCTTCACAGAGGCAGCGGAGTTGATGAG
AGCTATTAATGCAGCGGATGGTGATCTTACTGTTACACTTGGAACGTATTCAAAAGAAGAAGTTCAGCTGAAGGCGCCTA
CCGACTTATCGCTGTTCGAACGTCTGAAAGGATCGTTGAAATCATTTCTGTTCAGCCGACACATGACTTCGCAGGCAACA
GCTGTCGGATCGAGTTTGGACATCACGATTCCTATAATTGAATCGCTGGAGGACGAAGCCGACACAATCGCTTCTCATTA
CTTCCGTGCAGAAATCATCAAAGATTCGCTCGGCGGTGAAGTAAGGATCACTGCTGCATCCGAAGATGCGATTATCATCT
TGAGACCAGTTTCTACACCGGTGGAGATCTTGTGGCATCAACTGAAGGAAGTGTTCGTCAATCAGATATTTATCAACAGT
AAACAAAACAAAGGTATAAGAATCAGAAGTTTTATTTTGGAGAGCTATTACAATTGGGTGAACAAGGCGCGTGGCGTGCT
TACCAAAACATCACTGTCCGAGAAAGTTCGGTGGTTCTTAAACGAACTGCTGGTTGCACCAAACGCGTCCATTAGAAAGA
TGGGACAGCTAGCAGAATCAAACAAGCAGAAGCTATTGAAACAATATCTACTCACAAATATGGATACTATGGTACTGAAT
TTGAAAACTGTAGCCACAAAGTTGAAGAATATGAAATCGGTGAGACCGGAGATGGAGCAATTGCTGAAAATCTCGGAATC
TGGCATCGCGCAGGTTGAGAATTATTCATTTCTACGACACTTATTGACCGATTTGTTTGACGAAGAAGACGAGGTTATCA
ATCAACACGTTGCGCTATTGGATCGTATTCATGCCGAAGTGCACACCACATATCAAGGAATATTAATTGACGGCGTACAA
AGGCACCTGGAGAAATCGGGAGAGGAAGATAGCTCGTATTACGATATATTGATTACCGATTTGCAGAAGAACCTGAAAAA
TATAGATAAAGGAGAAAATTTACTTGGAAAAACTAAGGAGAACGATTTGGCAGTCGCAGAATTTATAAGCGACAGTAATG
GAGGTAAATTAGAATTCGAAGCTAAAAACATCAAAATCTTGAAGAAGGACAAGGAATCGCGCAATGAAAAAATCGAGGAT
TTCGAATATTTTATACTCACGGAAATAGAGAAAGCTGTAAAGTATTCCGAGCAAAATATTTTACGGAAGTATGATCAAAG
GGATGCCACGAAAAATGCTGTGACAGAAGACAAGAAAGATAAGAACTCCGTCAAATCCAACGATATTATTCTGCACTCCT
CTCAAAATCAGAGCGATGGCGAAGATAGAAAGAATAAAATACAAAGCTCTCTTCAGGATGAGATAGATTTTATGCGACCA
ACAAAAGCAGCGAAAGCGAAACTCGAGGAAACGACCGTCAAAGACAAGGAAGATAAGTCTTCTGTAAACTCTGCATCGGA
TGACATTAAAAAGTTTCATGTTTCTAATATGCCTGTAACTATGGATATCTCCAATGTAAGAACAACTACTCCCAACAAAA
GACGAACTTTATCGCAGCGTAGTGACAATGACGTCAGTGATACACAACATAATCGTGAAACTAATTTAAGAGCTAAATCA
TCTGATCAGAAAGATTCAGGTCAAAGTAAAATTATACCGACTGATCTACTGGAAGACTTTCAAAAGCCTGTATGGGTTGC
CAATGAGGAGAGAGACTTCGCGGTATTTCAGAAAAACTCACAGATCTCAGACACGCAGCATGGTACGAGAAAGCCAAGTG
ATGTGAAGTATAAGAAGAAATATGTGAAAGACACAGATCAGGAAGCCAAATCAAAATCACATACAGCTAAACATATCGAC
GATGAATTATAA
PEP:
>LH20954-PA
MAYHAFIWRLLFVACSIQALWAISEDDPLEYMSKEEREALKEEARDMFYHAYNAYMDNAYPADELMPLSCKGRYRGSEPN
RGDIDSTLGNFSLTLVDTLDTLVVLGDLEEFGNAVKLVARDVSFDTDVIVSLFETNIRMLGGLLSGHILAEYLQQRADIM
PWYRGELLDLAKDLGYRFLPAFNTTTGIPYGRINLKHGMKGVPMEVSRETCTACAGSMILEMAALSRLTGEPIFEEKAQK
AMDVLWRMRHRGTDLMGSVLNVNSGDWVRRDSGVGAGIDSYYEYCLKAYILLGDEKYLGRFNKHYQAVMKYVSQGPMLLD
VHMHRPNTNSKNFMDALLAFWPGLQVLKGDIKPAVETHEMLYQVMQRHNFIPEAFTTDFQVHWGHHPLRPEFLESTYFLY
RATGDHYYLGVGRKVLKSLQTYARVPCGYAAVSDVRTNKHDDTMDSFVLSETFKYLFLLFTEPGELVLDLDEFIFTTEGH
LLPLTLASIRTNVSSDFERMDIVHVDEFDRTCPNSLHLFPASVRQPLRNMVEDVCPRRSIKRRLSASQFQANNLEHLKML
SDMGITTLTLADGRVQLLHTFSNAKTPQDSEEGLLFMQEMVELSKMQTQQPETKPQTVTFVRPNTDPPEKVMLLAGPAQF
GPELQSFYKIIGKVIFTYPPAACTDLLNADKLAGKIVIMDRGNCMFIEKARRIQRAGALAGIVLDNVAGSSAATSPMFAM
SGDGKEVDDVTIPVVFLFFTEAAELMRAINAADGDLTVTLGTYSKEEVQLKAPTDLSLFERLKGSLKSFLFSRHMTSQAT
AVGSSLDITIPIIESLEDEADTIASHYFRAEIIKDSLGGEVRITAASEDAIIILRPVSTPVEILWHQLKEVFVNQIFINS
KQNKGIRIRSFILESYYNWVNKARGVLTKTSLSEKVRWFLNELLVAPNASIRKMGQLAESNKQKLLKQYLLTNMDTMVLN
LKTVATKLKNMKSVRPEMEQLLKISESGIAQVENYSFLRHLLTDLFDEEDEVINQHVALLDRIHAEVHTTYQGILIDGVQ
RHLEKSGEEDSSYYDILITDLQKNLKNIDKGENLLGKTKENDLAVAEFISDSNGGKLEFEAKNIKILKKDKESRNEKIED
FEYFILTEIEKAVKYSEQNILRKYDQRDATKNAVTEDKKDKNSVKSNDIILHSSQNQSDGEDRKNKIQSSLQDEIDFMRP
TKAAKAKLEETTVKDKEDKSSVNSASDDIKKFHVSNMPVTMDISNVRTTTPNKRRTLSQRSDNDVSDTQHNRETNLRAKS
SDQKDSGQSKIIPTDLLEDFQKPVWVANEERDFAVFQKNSQISDTQHGTRKPSDVKYKKKYVKDTDQEAKSKSHTAKHID
DEL
Swiss-ProtER degradation-enhancing alpha-mannosidase-like protein 3
KEGG     K10086  EDEM3; ER degradation enhancer, mannosidase alpha-like 3     
SUPERFAMILYSSF48225  Seven-hairpin glycosidases superfamily     
Gene3DG3DSA:3.50.30.30     
PfamPF01532  Glyco_hydro_47; Glycosyl hydrolase family 47     
PRINTSPR00747     
OrthologiGroup-00185    ER degradation-enhancing alpha-mannosidase-like protein     

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