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Gene detail [Fasta]

Species Linepithema humile
GeneLH20862
Positionscf7180001004995:630579..639439[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20862
sequence mRNA:
>LH20862-RA
ATGGAGGCTCACCGTGTCAACCGATTGATGACCGACGCACCGATGATCGACGAGCGTGGAATACCCAGCGTCATGTGGAG
CTGCTTGAGTAAAGAGATGCTGCTCGACTTTTACTTCAACGTCGACCGGATATTCTATCGAATCGGATATAGTATAGCCA
CCAAACCATGGGTTTGGCTGATGATATCCGTGTGCCTAAATTTTGTCTGTGGTTTCGGATTATTGTTCTGGAGGGAGGAG
ACCGACGATGTCGAACTTTTCTTGCCAGACGGTTCTACAATTCGCAAGGATGCCGCCTGGGTGAAGGAGCACTTTCGAGA
CGATCTCAGATACGAAAGTATCCTCATCACTGCCCCTAATGTGCTGGATCCTAAAGTGCTGCGATCGATAAGAGACATCG
AAAACGATGTGAAGAGTATAGTGGTAAATAATAATTCCTGGAAAGATGTGTGTGCTAGACATTTCACATGGTTTCAAGAA
AATGACGATTGGGAAACGATGAATAAAACCGAGTTTCCTGAGGAGTATCTACCAATTATAGATAATATGATGACGAAGGA
ACCTTGTGTCCAAAAGTCGCTTCTAAAATTATGGCAGAAAAACGGTGGAAAGGATATTGATAGCTTGACGAAATTAGAGA
TACTGAAAGACGTTACAGCAATTATGCAAAATACGAAAACCAAAGATATATTTTCTGACATCACATCGTTGCTGGCGGGC
GTCGAGTACGATGAAAATGGATTGGTGAGAAGTGCGAACGCGACTATTTTGTTCTGGATGCTGAAGAAGTCCAATCCGCA
CTCGCCGGAATGGGAAGTGGAATTCATCAATAGGGTACTACGTTCGAATCGCACCTTTTCACCGGGTATGGAGATCTACG
CGGTAACGTTACGCAGTTACGACGATGTGTTGCACGAGATAGTCAACAGCAACATGATCATGTTGTTCTGCGGCATGTCG
CTGATCTCGATCTACGTGATCGTGATGATCGGTCGTTGTAACGTAATGCAACAGCGGGTATATCTGTCCCTGATGGGGAT
CTGCGTGGTCGGCCAGGCCCTTCTGTCGTCCTACGGGCTATGCTTCTACATGGGATTTATGTACGGGCCGGTGCATCCGA
TCCTACCGTTCCTGCTACTCGGCATCGGTGTCGACGACATGTTCGTCATCATGCAGAGCCTCGAGACCATGTCTGAGGCG
GACAAGGCTCTAGACATTCCTGCCCGCATCGCGAAGTCCATTCAAGTGTCAGGTATGTCTATCACTGCGACATCATTCAC
TAACATCGTGGTCTTCGCCATCGGCATGACGACAGTGATGCCGTTCCTGAAGTCTTTTTGTATGTTTGCCACGATGGGTA
TATTGTTCCTCTATATCTACGAGATCATGTTCTTCGTCAGTTGTCTGGTGTTCGACGAGAGGCGACTGGCAGCGAAGAGG
GACGGTTGCTGCTGCCGGCCGCGTCCTAATTGGCGACCGAACCAGTGCAGCAAGCAGAACTTCCAGCGATTCGCCTTTGA
AAAGTATATCGGACCTTTCATTTTGAGGACGTATATGAAAAGTATCATTCTGCTGATTACCGCCGCCCTGCTGTGCATTA
ACACTTGGGCGATATTTCATCTACAACAGAACTTTGATGTGTTCGTATACTTGAATCAAGATTCTTACCCAGTACAGTTT
AACAACAAATTGGTGGAATATTTTCCAAGATACGGCAAAAGCGTGAATATATATCTGACGGGCGTCGATTATTATGAGGA
TCGCGAAGCGCTGTTTCAACTAGTGGACAATGTCAAACGGGACCCGTACGTCAGTAATTACACTCTCGACCCATGGTTCG
TGGCGTATGAGAAGTGGTTGAACATGACTGGCAAAGCGCAATACATCGAGGATAAAGAGGAGTATTACAATACTCTCACG
GAATATCTACTTTTCACGGGGAAAGGCCAAGCGTACATTCAGGATATGAAGTTCAGTAAATTACCGTTTAACGACTACTA
TATCACAACTTCGCAGATTCCAGTGCAACACATTTCTATAGGCACATCGTCCGACCAGATAAAGGCTTTGCAGGCAATCA
GAGATGCCGCGAAGTCGGTGAACTTCACTCACGGACACGTTGCAATTTACTCGGTAGATTATTTAAGATGGGTGACAAAT
AAGATAATTAGCGAGGAATTAACTAGGAACTTGTGTCTGGAAATACTGATGGTAGGAATGGTGGCATCGGTACTACTTAG
GAATTTAATTGCGTCGTTCTGGGTGATGTGCTGCGTATTGTTCACACTCGTCGACCTTCTGGGCTCAATGTACTTTTTAG
GATTGACTGTAGAACTTACATCAAGCATTATAATCATGTTGTGCGCTGGATTGTCGGTCGATTACGCCGCGCACATCGGA
TTGGAATTTATACGCTCGAGCGGCAGTAAACAAGAACGAGCTCTGACATCACTTAGTGTTATTGGACCAGCAGTATTGAA
TGGTGGTTTGAGCACGTTTCTTGCCTTTGTCTTTCTAGGTTTTAGCCAGGCTTTCATTTTTATGACATTCTTTAGGCTAT
TTACATCCGTAGTACTGTTTGGTTTGTTTCACGGATTGCTGTTTCTACCAGTGATATTAAGCTTAGCGGGACCTGGCGAG
AGAAAATCAGAAAACAAGCAAAAAAATCAGAATATGGAATATCAGAACGACTATTATAGTGTTCATCTTTCTCAAAATGG
AAAA
PEP:
>LH20862-PA
MEAHRVNRLMTDAPMIDERGIPSVMWSCLSKEMLLDFYFNVDRIFYRIGYSIATKPWVWLMISVCLNFVCGFGLLFWREE
TDDVELFLPDGSTIRKDAAWVKEHFRDDLRYESILITAPNVLDPKVLRSIRDIENDVKSIVVNNNSWKDVCARHFTWFQE
NDDWETMNKTEFPEEYLPIIDNMMTKEPCVQKSLLKLWQKNGGKDIDSLTKLEILKDVTAIMQNTKTKDIFSDITSLLAG
VEYDENGLVRSANATILFWMLKKSNPHSPEWEVEFINRVLRSNRTFSPGMEIYAVTLRSYDDVLHEIVNSNMIMLFCGMS
LISIYVIVMIGRCNVMQQRVYLSLMGICVVGQALLSSYGLCFYMGFMYGPVHPILPFLLLGIGVDDMFVIMQSLETMSEA
DKALDIPARIAKSIQVSGMSITATSFTNIVVFAIGMTTVMPFLKSFCMFATMGILFLYIYEIMFFVSCLVFDERRLAAKR
DGCCCRPRPNWRPNQCSKQNFQRFAFEKYIGPFILRTYMKSIILLITAALLCINTWAIFHLQQNFDVFVYLNQDSYPVQF
NNKLVEYFPRYGKSVNIYLTGVDYYEDREALFQLVDNVKRDPYVSNYTLDPWFVAYEKWLNMTGKAQYIEDKEEYYNTLT
EYLLFTGKGQAYIQDMKFSKLPFNDYYITTSQIPVQHISIGTSSDQIKALQAIRDAAKSVNFTHGHVAIYSVDYLRWVTN
KIISEELTRNLCLEILMVGMVASVLLRNLIASFWVMCCVLFTLVDLLGSMYFLGLTVELTSSIIIMLCAGLSVDYAAHIG
LEFIRSSGSKQERALTSLSVIGPAVLNGGLSTFLAFVFLGFSQAFIFMTFFRLFTSVVLFGLFHGLLFLPVILSLAGPGE
RKSENKQKNQNMEYQNDYYSVHLSQNGK
Swiss-ProtPatched domain-containing protein 3
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF02460  Patched; Patched family     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     

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