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Gene detail [Fasta]

Species Linepithema humile
GeneLH20861
Positionscf7180001004995:647204..657408[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH20861
sequence mRNA: 
>LH20861-RA
ATGGAGGCTCGCCGTGTCAGCCGACCGACGGCCGTCACAACGGTGGCCGACGAAGAGCGTGGTGTACCCGGCGTCACGTG
GAGCCGCTGCAAAGAACTGCTGCTCGACTTTCACTTCAACGTCGACCGGATATTCTATCGGATCGGATATAGTATAGCCA
CGAAACCATGGATTTGGCTGACGACATGCGTGTGCCTAAATCTCGTCTGTGGTTTCGGATTGTTGCTCTGGAGGGAGGAG
GTCGACGATATCGAACTTTTCATGCCTGTCGGTTCTATATTTCGCAAGGATGCCGCCTGGGTGAAGGAGCACTTCCGAGA
CGATCTCCGACACGAAAGTATCCTCATCACTGCCCCCAATGTGCTGGACCCTAAAGTGCTGCGATCGATAAGAGACATTG
AAAAAGATGTAAAGAGTATAGTGGTGAATAATAATTCCTGGGAAGATGTGTGTGCAGGACATTTCACATGGTTCCAAGAA
AATGACAAGTGGGAAACGATGAATAAAACCGAGTTTCCCGAGGAATATCTACCACTTATAAATGATACAATGATGAAGGA
ACCTTGTGTCCAAAAATCGCTTCTAAAACTATGGCAGAAAGACGGTGGAAAGGATATTGATAACTTGACAAAATTAGAGA
TACTAGAGGACATAACTGCAACTATGCAACATACAAATGCTAAAAATATACTTTCCGACATTGCACCGTTGCTGGCGGGC
GTCGAGTACGAGGAGAATGGACAGGTGAGGAGTGCGAAAGCGACGATTTTGTACTGGGTGCTGAAGAAGTCCAATCCGCA
CTCGCCGGAATGGGAAGTGGAATTCATCAATAGGGTACTACATTCGAATCGCACTCTTCCGACGGGTATGGAGATCTATG
CGGTCACGTTACGTAGTTACGACGATATGTTGCACGAGGTGGTCAATAGCAATATGACCGTGCTTTTCTGTGGCATGTCG
CTGATCTCGATCTACGTGATCGTGATGATCAGTCGTTGCAACGCGATGCAACAGCGGATATATCTGTCCCTGATGGGGAT
CTGCGTGGTCGGCCAGGCTCTTCTGTCGTCCTACGGGCTGTGCTTCTACATGGGATTTATGTACGGGCCGGTGCATGCGA
TCCTACCATTCCTGCTACTCGGCATTGGTGTCGACGACATATACGGCAAGAACGTCAATATATATCTGACGGGCGTGGAT
TATTATGAGGATCGCGAAGCGCTGTTTCAACTAGTGGAGAATCTCAGACGGGACCCGTACGTCAATAATCACACTCTCGA
CCCATGGTTCGTAGCGTATGAGAAGTGGTTGAACATCACTGGCAAAGCGCAATACATCGAGGATAAAGACGAGTATTACA
ATATTCTCACGGAATATCTGTTATTCTCGGTGAAAGGCCAAGCGTACATTCAGGATATAAAATTCAGTAAATTACCGTTT
AACGACTACAACATCACAACTTCGCAGATTCCAGTACAACACATTCCTATCAGCACAACGTCCGATCAGATAAGAGCTAT
GCAAGCAATCAGAGATGCCGTGAAATCGGTGAACTTCACTTACGGGCACGATTACATTGCAATTCACTCGACAGATTTAA
TAAGATGGGCGACAAATAAGATAATTGGCGAAGAACTAATTAGGAACTTGAGTCTGGAGATACTGGCGGTAGGAATGGTA
ACATTGGTATTTCTTAGGAATCTAATCGCGTCATTTTGGGTGATGTGTTGCGTATTGTTCACACTCATCAATCTTTTGGG
CTCCATGTACTTTCTAGGATTGACTGTAGAAGTTTCATCAAGTATTACAATTCTATTGTGCGCCGGATTGGCGGTCGATT
ACGCCGCGCACATCGGATTGGAATTTATACGCTCAAGCGGCAGTAAACAAGAACGAGCACTGACAACATTCAGCGTTATT
GGACCAGCAGTATTGAATGGTGGTTTGAGCACATTTCTTGCCTTTGTCCTGCTAGGCTTTAGCCGAGCTTATATTTTTAT
GACATTCTTTAAGCTATTTTCATCCGTAATATTGTTTGGTTTGTTTCACGGATTGTTGTTTCTGCCGGTAATATTGAGTT
TAGCGGGACCTGGCGAGAGAAAATCAAAAAGCAAGCAAAAGAATCAAATTATGCAATATCAGAACGGCTATTATAGTGTT
CATC
PEP: 
>LH20861-PA
MEARRVSRPTAVTTVADEERGVPGVTWSRCKELLLDFHFNVDRIFYRIGYSIATKPWIWLTTCVCLNLVCGFGLLLWREE
VDDIELFMPVGSIFRKDAAWVKEHFRDDLRHESILITAPNVLDPKVLRSIRDIEKDVKSIVVNNNSWEDVCAGHFTWFQE
NDKWETMNKTEFPEEYLPLINDTMMKEPCVQKSLLKLWQKDGGKDIDNLTKLEILEDITATMQHTNAKNILSDIAPLLAG
VEYEENGQVRSAKATILYWVLKKSNPHSPEWEVEFINRVLHSNRTLPTGMEIYAVTLRSYDDMLHEVVNSNMTVLFCGMS
LISIYVIVMISRCNAMQQRIYLSLMGICVVGQALLSSYGLCFYMGFMYGPVHAILPFLLLGIGVDDIYGKNVNIYLTGVD
YYEDREALFQLVENLRRDPYVNNHTLDPWFVAYEKWLNITGKAQYIEDKDEYYNILTEYLLFSVKGQAYIQDIKFSKLPF
NDYNITTSQIPVQHIPISTTSDQIRAMQAIRDAVKSVNFTYGHDYIAIHSTDLIRWATNKIIGEELIRNLSLEILAVGMV
TLVFLRNLIASFWVMCCVLFTLINLLGSMYFLGLTVEVSSSITILLCAGLAVDYAAHIGLEFIRSSGSKQERALTTFSVI
GPAVLNGGLSTFLAFVLLGFSRAYIFMTFFKLFSSVILFGLFHGLLFLPVILSLAGPGERKSKSKQKNQIMQYQNGYYSV
H
Swiss-ProtPatched domain-containing protein 3
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF02460  Patched; Patched family     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     

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