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Gene detail [Fasta]

Species Linepithema humile
GeneLH12890
Positionscf7180001004653:553564..564750[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12890
sequence mRNA:
>LH12890-RA
ATGGCGAATCTTTCGGTGGCTAGTAAGGACTCAATTGATCTGATGCAAGAAAAGAACAAAATACAAACAGTACTCATCAC
GAATAAAAATACAAGCAGTAAGGACTCAATTGATCTGATGCAAGAAAAGAACAAAATACAAACAGTACTCATCACGAATA
AAAATACAAGCGTAAGATACGATGATATTTATATCACACCGGACCATATAAAATTTGACGAAGCCTTTGAAGGTGTCACG
TATCAGCAACGAATTACTATCAAAAACGTCGGAAGTAAACCTGCGTTCATCAAAATCCACCAGCCAACTTCTATAGCTTT
TCAAATAAAAATTTTGCAAAGTAGCATGCGAGTGAGTCCTGGATTGAGTGTAACAGCGTATGTAACTTATAGTTTTAAAA
GAATGTCCTTATTGCATGCGATTATCCCGATCGAGATCAATGGAAAGGCTTTCAATTATCGTGTGTTAAGTACAATCGCC
ACCGGATACCTCTGCATCGAGCCAAAGTCGATAGACTTTGAAATGAAAATCGACAGATTCTCGATCGATCTTGGACAAAA
TGATGTAGACATAACGGTAAAACCCTTTCGCGGAATAATCGGACCACAAAAAGAAGCGAAACTCCACGTTGAATTAATGT
GCATGAAGGAGGGCGTGTTTTACAGCGAGTTCTGGATTAAATCTATTCCGAATATACGCGTTCCCATAAAAGTAAATGTC
ATCGTACCGCGATTGGTAGTTTATCATCCGAACACGATCGGCGATCTCACCCTCATCGAATTTCCATCCACAATAGAAAA
TAGCAGCAGATACGATACTTTCGTTCTGCGCAATATGTCATCCCGAGTCGCGAGTTATGTCATCCTTGGTGAGATTGACA
ATGAAGTAAAATACATTCAGGATATTGATCGTAAGCGCTATCCAACTTACGATGCTTTCAAAATTCACCCGCTTGAAGGA
CATATAAATCCATTTCAAGGGATTGATCCTGCAAAGGATTCTACGATAAACACAGAAAATTCACCACAAAAAATTTATAT
ACAAGAAACAGTGATGGAGACTTCTTCTTTATCAACGTCCTGCGAATCAAATTCAGATACTTATGACGTAATAAAGCTCT
GTCTTTACGGTAAAATGGAGACTGTACAGTTGCAATTCGAGCCCGATACTCTCTATTTCGTCAAATCTGCATTCAACTTG
GTCTTTGATGTCATAGCGCATTCTTACAATTCGGATGCGTCGAGACGATGCCTCGAAAAGACCAAAGTTGGAAGCTACTC
CGTCAAATGTATGGTGAATATTATTTTCAAGTCCAAAAACGATCTTCTAAGCAAAAGGAGTTTGCCGGCAATAAAAGCAA
CAGATGACGATGAGGAAATTATGAAACGTCTTCTTCGTTCGCCTAAATGGAAATCATTATATAAAAACGATTTGAAAATC
GATGGATTTGTGAAATGCGTGAGCGAATCTCTATTCCAAAAATCGAACACAACCAAGGCAATTGTATTGATGCCATTATC
GCCCTTACAAATATACAGAATCCATATTTATCCAATCACTTTCATATTCGGCATGGTAGCATCCAATAGCTTCAACTATC
ATCGGTTGGTTGTTAAGAACACGAACGACATCCCGGTGATGATACGATTAGAAAGTTTATCGACGTGCATTCGCTTCCCA
GAGGGTGACTTGATGATCTTGCAACCGAACTCGACAATAACGAGACTGATTGAGTATTTCGCGGACAGAATTGGCAAGTT
TAACGGGTACATCAATTACGTGATTAACGATAATCACTGCTTCGAGCTCAATATTATCGCTGACGTCGTGCGCAAACAGT
TGTACGTTGACAAAAGCGAGATTGATCTCGGTAAGGAATGGCTGAGTGAAGAAACATACAGACCAATAGCCTCTGTTATT
CGAATTACAAACAAATTAGAAGCGAAAACGCATTTTAGTTGGGAAGTGCCGACGATGTCTGGATTCTACGTAGAACCGAC
ATCAGGTGTCATACGCGGTAACACTATTTTATACGTTTACGTGTATTATAAGCCGAATGACGCTAAGGTTACTCATGTGC
AAGCGATAATGAAGTGTGAAAACGAAAATTACGTGTCTCTGCGATTCAATGCACCGCGAGTCGTGCCAAAAGTTGAATTT
ATGACCGACAGTGCGAGCGTGGGGGAAATACCGCTCAATTTGCCGATCAAAGTGATCGCAGTTCTTCAAAATTTCGAATT
TAACGAGGTGTTGTACGAGGTGGATAGCGCATCGTTGATACGCGGCTGCAGCGTTAATCCGCTGCGGGGAAAAATATCGC
CACGTGGTATCGCGATCTTCGAGGTGCATCTTAAATTCGGCGTGTGCTGTCAATTTTCCACTGCAATCGTCGTTAGGATT
CAAGAACGTCTACAGTTGCGGTACACGATAAGCGGCAATGTATCATTTCCGCAATTGAAAATTCTACCGCAACAAATAAA
CATGAATCGCGTCAATATTGATACTTCCCAGATTCATCGGCTAACAGCCACAAATATTGGAACGACAACGTTACAACTGC
ACGTTCCACTAGAAGAATATCCCGAATTTCGCGTCTCTCTGTCGGCGAACAGCAAAAATTCGGACATAGGCAAGTTCAGT
ACGGACGGTATAAGCATCGCCCCAGGCGCAAGTCAAAGTCTCTACTTACACTTTCAACCGGTCGACTTGGCCAGCTACGC
TTTCTATTTGCCGATGGTGATGAATCAGCTGCTTGGTCCGGTGTCGATGCTGAATCCTAAGAGTATTAAGCCATCGGAGT
TTCTGAAAGCACACGAAACTCATTACGCAAATTTATCGGGGTTTACTATGACACCGTTGCCTGATAAGCTACCCACGGTA
TCTATCGATTGCACCGTTGCTGGTCGTGTTGAATATTTCAACAAACTTCTGTTTAGATTCAATCTCGAGACTAACGAATT
GCGCGATGAATTATCTATAGAGAATCGGATAAAGCCGAGGGATATAGCGGTGTCGATAAATATCGAAGAATTTAACGAGA
TTGATTGCCCATTCGCTATCGAGTGGTCCCGCGGTGCGGAGATCAGAAGAACATCTGATTCGATCGAATGTACCTTACGT
CCTGGCGGCAGCGTCTTCTTTGTTCTGGAGTTCAAGCCGAGAAAACGCGGCAGCTTTAGTGCCGAGGCGCCGATATACGT
TCGCGGCGAGCTCGACGACGGCGTGTTCAATAAATTACGTCTCGAGGGCGAGTTTCCCGCCAGTTCGATCGACATCGAGC
CGACGGAGATATATTTTACGCCTGTTCCTCTCGGTACGGCGATAGAGGAAAAGTTCAGGATCCGAGCGAGGCACTTTGAT
AATGCGGCGTTTATACGACCGAACTTTCCGACGACGTCGCGATGCTGCGGGGATTACAAAGACGAGTTGTTACGCATCGA
ATTCCCGAACAGCACTATCGTTCCTGCTTGTTCATACGTGGAACTTGAAGCGAAAATAACATTCAAGAGTGATCGGTCGG
TGTCGTTGTGCACAACAATTGAGTTTTGGGACAACCATGCGGTCGCTGTGGGTTTTTTAAGAGTTTACGCTACAGCAGAC
AACTGTCTGTTAACAACGTACATGTACCCGATAAATATGTCTGTCTTCGATGATACATGTGCGAGAGCCGAGCACTTGGA
AAAAAGTGTTTCGCGTTCATTGACATTATCGGACAACGGAATGGACAAGAATACTCTCAACAATGAAGATATTTTTAATA
TATATAAACACGCGAGATCAAGCATTACTGATCCGCATTTCGGTAATCCGAACGATAGCGTCGCAAAAATAACAGATTCG
AAATTACATTGGAATGGCGAGATAAACGGCAATAATAATAAAATAGACGACAAGAATGTGCAGAGAGATAAAAAATGGAC
AGTGGACGATAACGGTAGACAAATATCGAATCTCAAAAGATATTCTGCGTTCCAGAATACAAATATTCCAGAATCTATCG
ATTCTGAAGCGAAGAATCACATGCACGTTTTCTCTGAAAAATTATTGCTTTCTCCTCCCACCGATAATCAAAATAGAATA
ATTACGATAATGGAAGAATGGATGTATTCGGACGTGTTAAAATTTCATTTCTATCCAAACATTCCTCACGGCATCACGGC
AGCATTTCTGAACATCTACGTGAAGAGAAAATCTAATACAAGAGTTTTTAAACGTAAAAATAATGCGACTGTGCCATCAT
TTGTCGACGTGCTGGAATCGCTCGTAGGATCGGACATTCGCCTTTATCTGAAAGAGCAGTTGAAGCAATTGTTACCCGAA
AACGACATTGAGAGAGTCAGTTATGTCAGTTATGTTCTTGAGTTGTACGAGAAGATACTCGACTTTCTTCTATCGCGAGG
AGCGTATTTAGTTCACGTTTCGCCGCAATTTCTCCTACATTACGACGATTATCTAATTAGCATTGACATCATACAGAATA
ATGCGCAAAAAAGAAAATCTGATGTAATGCGCTCGCAATGCGAGCAGTTGTCGCGGCAATCATTCGAACGGCAAAGCGAG
CAATCTTGGTTGGATGTAATTTTGCAGACGTATAAGTGTTTTGTGCTCCGTGGAATACACGAGCATAAATTTCGAGCGTT
GCCGCTCGTCACGACGTATTCCTCGAGAAAGTCCGCGATGTATCGGGAATCGATGGTGTCGTCTACAACGAGTTTGCCAA
GGCAGTACGAACTTCACGAGAGAGCCATTCATAGTATTGCGAATCTGCCGAACGATAGACTCACCCCCGGTGACCAATGT
CCGGAAGAAAAATTTCTGCTGAATTGGCTGCAATTTCATTACGAGCAACAACGCGCGCAAGATTGGATGACCGATCGCCG
TGTGATCTTGAATCCGCGGGAGAAGCAGGATGTGACCGAATATCGCGCGATTCAGAATTTTCATCGCGATTTGTCGGACA
GTCTGATCCTGATTGCGGTCACCGCGTCCTACTGTCCCTTCCTCATCGACGAGTGCTTTAGCAATTTATATATTCGTCCG
AGAAATAAAGAAGAGGCATTGCATAATGCTATTTGCTTGGTCACCGCTTGGAGAAAGATACGACTTGGCTTTATAATTAC
GCCGATACAAGTAATTAATCCGAATCAAGTACAAATGTTAATGCTAGTCGTCCATCTTTTTCAAGCTTTGCCGACATATA
TACCTTGCGCCAAGATAAAATTTAGCTGCCCGCTATCCGAAACTGTAACCAAACAAATAAGCGTGTCGAATCCGACAGAT
AAGACCGTATATTATTTATTGTCATTCCTAAGCAATGCCAATTGTTTCTTCACTGTTTTAAAGCCCGTCTCGATCTTGCG
TTTGAACGCGCACGGCTCCGGCCAAGTGCAAATACAGTTTCATGCCAAGAAAATACAGAAAAGCAAAGCGTACTTGTTGC
TCTGCGGACGTGCTGTTGGACCATATTTCGGGAGAAATCAGACTATCGTCTTGGAGGGTTACGTCGATAATCTGAAAATA
ACAAACGAGTATGTTATACGCAGCAAACTGTATAAAATCGTTGACATAAATCTCAGAATCAACGTACCTTATCGAAACGC
GGCAGAGTATGATATATGGATGACGGAAGAACGGCCGAGCCATCCCTCGATTCTAAAAATGACACAATGGTGCGAATTAC
GTGCTAGAAAAATACCGCGGAGACTTTTCTTGAATCATAAATCATTGATCGTTACTGAAGGTGCATCAGAAGCGAATTTG
TCGATCACTGTAGCATGTATCGTAGCTAAGCATCAAACTTTTTGGTTGATCTTCCAAGCAAAGACGGGTGACTTTATTAT
CCAAATAAACTCGATTTGGCAAACATCTGTCAATGATCACATCGTCGTCGAGTGGACGACTCAAGGGGAATGTGTTTGCT
CCGATTCGCGAAGCATAAGAGATGCTTGTCCGTTTAACATTAACCTGCCTATACCATCGCGAAATTCTCAGTTTTGGAAA
TGCGTGGTCAAAATGTTTGAGAAAACTCTTGATTCTAGAGAACGCCAGTTTTGGGCCAAATTTTTGTCCCAATACTCGAG
TACATACATTGAATTATGTTTAATACGATGGTTGATGAGAGATGATGATGATTCCGCGGCTTTGGAATTTGTCCATATTT
TTAACACCACGGTCACGTATAAAGTAACGATTTCTGACAAATTGAGTCCCCTTGTTGTACCAGAATATATCACTATTCAA
GATGTGAGACCGTCCAATCAGCAAATTCCAATAATTGCGCATATTTTACCAACAACTCCTCTATTGTATGAAACAACAAT
CACTCTCACATCCTTGGATGGCAAAGAACTTCGAGTATATACTATCAGCTGTTTACAGTCATAA
PEP:
>LH12890-PA
MANLSVASKDSIDLMQEKNKIQTVLITNKNTSSKDSIDLMQEKNKIQTVLITNKNTSVRYDDIYITPDHIKFDEAFEGVT
YQQRITIKNVGSKPAFIKIHQPTSIAFQIKILQSSMRVSPGLSVTAYVTYSFKRMSLLHAIIPIEINGKAFNYRVLSTIA
TGYLCIEPKSIDFEMKIDRFSIDLGQNDVDITVKPFRGIIGPQKEAKLHVELMCMKEGVFYSEFWIKSIPNIRVPIKVNV
IVPRLVVYHPNTIGDLTLIEFPSTIENSSRYDTFVLRNMSSRVASYVILGEIDNEVKYIQDIDRKRYPTYDAFKIHPLEG
HINPFQGIDPAKDSTINTENSPQKIYIQETVMETSSLSTSCESNSDTYDVIKLCLYGKMETVQLQFEPDTLYFVKSAFNL
VFDVIAHSYNSDASRRCLEKTKVGSYSVKCMVNIIFKSKNDLLSKRSLPAIKATDDDEEIMKRLLRSPKWKSLYKNDLKI
DGFVKCVSESLFQKSNTTKAIVLMPLSPLQIYRIHIYPITFIFGMVASNSFNYHRLVVKNTNDIPVMIRLESLSTCIRFP
EGDLMILQPNSTITRLIEYFADRIGKFNGYINYVINDNHCFELNIIADVVRKQLYVDKSEIDLGKEWLSEETYRPIASVI
RITNKLEAKTHFSWEVPTMSGFYVEPTSGVIRGNTILYVYVYYKPNDAKVTHVQAIMKCENENYVSLRFNAPRVVPKVEF
MTDSASVGEIPLNLPIKVIAVLQNFEFNEVLYEVDSASLIRGCSVNPLRGKISPRGIAIFEVHLKFGVCCQFSTAIVVRI
QERLQLRYTISGNVSFPQLKILPQQINMNRVNIDTSQIHRLTATNIGTTTLQLHVPLEEYPEFRVSLSANSKNSDIGKFS
TDGISIAPGASQSLYLHFQPVDLASYAFYLPMVMNQLLGPVSMLNPKSIKPSEFLKAHETHYANLSGFTMTPLPDKLPTV
SIDCTVAGRVEYFNKLLFRFNLETNELRDELSIENRIKPRDIAVSINIEEFNEIDCPFAIEWSRGAEIRRTSDSIECTLR
PGGSVFFVLEFKPRKRGSFSAEAPIYVRGELDDGVFNKLRLEGEFPASSIDIEPTEIYFTPVPLGTAIEEKFRIRARHFD
NAAFIRPNFPTTSRCCGDYKDELLRIEFPNSTIVPACSYVELEAKITFKSDRSVSLCTTIEFWDNHAVAVGFLRVYATAD
NCLLTTYMYPINMSVFDDTCARAEHLEKSVSRSLTLSDNGMDKNTLNNEDIFNIYKHARSSITDPHFGNPNDSVAKITDS
KLHWNGEINGNNNKIDDKNVQRDKKWTVDDNGRQISNLKRYSAFQNTNIPESIDSEAKNHMHVFSEKLLLSPPTDNQNRI
ITIMEEWMYSDVLKFHFYPNIPHGITAAFLNIYVKRKSNTRVFKRKNNATVPSFVDVLESLVGSDIRLYLKEQLKQLLPE
NDIERVSYVSYVLELYEKILDFLLSRGAYLVHVSPQFLLHYDDYLISIDIIQNNAQKRKSDVMRSQCEQLSRQSFERQSE
QSWLDVILQTYKCFVLRGIHEHKFRALPLVTTYSSRKSAMYRESMVSSTTSLPRQYELHERAIHSIANLPNDRLTPGDQC
PEEKFLLNWLQFHYEQQRAQDWMTDRRVILNPREKQDVTEYRAIQNFHRDLSDSLILIAVTASYCPFLIDECFSNLYIRP
RNKEEALHNAICLVTAWRKIRLGFIITPIQVINPNQVQMLMLVVHLFQALPTYIPCAKIKFSCPLSETVTKQISVSNPTD
KTVYYLLSFLSNANCFFTVLKPVSILRLNAHGSGQVQIQFHAKKIQKSKAYLLLCGRAVGPYFGRNQTIVLEGYVDNLKI
TNEYVIRSKLYKIVDINLRINVPYRNAAEYDIWMTEERPSHPSILKMTQWCELRARKIPRRLFLNHKSLIVTEGASEANL
SITVACIVAKHQTFWLIFQAKTGDFIIQINSIWQTSVNDHIVVEWTTQGECVCSDSRSIRDACPFNINLPIPSRNSQFWK
CVVKMFEKTLDSRERQFWAKFLSQYSSTYIELCLIRWLMRDDDDSAALEFVHIFNTTVTYKVTISDKLSPLVVPEYITIQ
DVRPSNQQIPIIAHILPTTPLLYETTITLTSLDGKELRVYTISCLQS
Swiss-ProtCalponin homology domain-containing protein 2
SUPERFAMILYSSF47576  Calponin-homology domain, CH-domain superfamily     
Gene3DG3DSA:1.10.418.10     
PfamPF00307  CH; Calponin homology (CH) domain     
ProSiteProfilesPS50021  CH; Calponin homology domain profile.     

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