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Gene detail [Fasta]

Species Linepithema humile
GeneLH12674
Positionscf7180001004631:834868..841706[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12674
sequence mRNA:
>LH12674-RA
ATGCCAAGCTCGTATTTATATGCCATTAACAATGAAGGGCGTGTATTTGGACTGTCGACGTCTGGGAACATGTGGCGTGA
ATTTATGTATCTGGGGCTTGAATTCAAGCAGTTGTCAGCTGTACCGCACTTTATGTGGGCTATTGGTGGTGATCGGCAAG
TGTATGTTCATGTGCACGGCTTAGATGTACCAATCAGGATTAAAGAAGAAACTTATGAAAATGAGCGATGGCTGCCTTTG
GAAGGATTCTCTGGAAGATTGCTTCCAACTGATAGATACAATTTTTCTAATCAAGATGGTACAGTTGATCGTAGCAGGGA
TAAAGTGAAATTACCCTCGATGGCATGGCAATGGGAAGGTGATTGGCAAATAGAAACAACATTAGATGGCCAACCGTTGG
ATCATGATGGATGGACATATGCAATTGATTTTCCAGCCACATACACTACGAAAAAACAGTGGAAATCGTGTGTGAGGAGG
CGCAAGTGGGTTCGTTATCGGAGATACAGCGCTATGAATTCGTGGTGTGCTATCGCACCTCTGCACAAAGATCCAACTAA
GGAGCCTTTTATCGATGTAGCCGTGGGTGGAAATCAGATGCCTGGAAGTAGCTCTGGAAATTTAGTGGTCTGGGCAGTAA
CTGCTCACGGCAGGGTGATGTTTCGCGTCGGAACGAGTACAACTTGTCCGGAAGGACAAAGATGGAGTTCTATCAAGCTG
GCGAACGGTCATGAAGTGTCTCAAATTAGCGTTGGAGTGACTGGTCTTGTTTGGGCTGCACTTCAGTCGGGCAAAGCATT
GGTTCGCACGGGTGTAACGAGAGACAATCCAATGGGTGACGATTGGTCGGAAGTGGACCCACCGCAAAAAGACTTGAGAT
TGGTGCAAGTCAGCGTAGGCACTGACGCCGTGTGGGCTGTAACGCACGATGCTGGAGTGTGGTTTCGAAAGGGCGTGCAA
GGCGAAATCAGCGGCGTTTGTGAGCAACTGGCCACCGGAACCGGTTGGGTTGAGATGCTGAGCAAAATGGCACTAGTGTC
TGTTGCTCCAAACGATCAAGTTTGGGCTATTGGCTACGATGATCGGTGTCTGTACTATCGCACGGGCATCACGCGTTCCG
AATTGACGGGAAAACGATGGAAATTGATAAACGCACCGCTTCAACTGAGTAGAGCGAGCAGCAACGCTAGTTTATCGTCC
AGCAACAGGCACAGCACTTGTGGCACGCCGCAACAGCAACGGCATCAGAGCTGGAGTTCTTTGAGTCGCCCTCATAGCAC
TAGCGAAGGAACAGCGTTAATTAGAGAATGGGAGGAGCAATCACGTTCGGCGCCAACGCCCACTTCTTTAAAATTGTGGC
AACGTACCGGTGACGGTATATCTGCAAAAAATATGCAACAAACATCTTTTCAAGATATATATTTAAATGAAGAAAGAAAG
AGATCTGCAAATTCCGTAGACATAAATGATTTGAATGAAGCGAGTGTCGCTAGTATAACTATATCTAACGAATCTTTAAC
GAAAAGTGGAGAATCCATCGTCGTCTTGGGAAAAGGAATGGGCAGTACTGTTAAGATTAATCCTGCTGCTTGGAGTCCGG
TTCACTCTGTCGGATCTATGGTAGGCGTCGAAGCACATCCGGAAAGCGACGGAAGTGTATTTGATCCGGATTTAACTGGA
GATTCCGGAGTGTACGGCGAAGACGAAAGCGCCGAGATAATATATTGGGCCGAGTGTGATGTGTTATGGTACAAAGTGGA
GGCTGGAGCGTGCTTTGTTGATCCAACAAATCCGCCAAAATGGATTTTAGATGGCAATGGTATAGTACAAGGAGAGACCG
GAGAATCGTGGAGAGTGTACATTTTAGACGAATTAAAATCAAGATTAAAGAAGATGCCATTTGATTCTTCAACAGAATAC
GAAAAAGCAGTTGAAAAATCATCTTGGGTGAAGACTGGCGACGCTAAATGTAAAATTAAGAACGGTAATTTATATGAGGA
TTGCAAAATTGAACTGGAATGGATAAGCAGCGATACTGGATCGTTAGATTCTGGAACTTTAATTATTTTGAATTCCGACG
GCGTAACAAGCATAATACAATTTCCAATCTCGGAAATCACGTGTGTCGTTTGCTGCAGTGAGCCAGGCAATCCAAGGATA
GCGATTCACACCCCTAAATTACGTCGTACAAAAGTAATTAGATTACAGTTTGCGAGCGATACGGAAATGGAAGATTGGTT
AGCGCATTTAACTTCAGTATCTTGCCAGATGAATAATGTATATGGTAGGCCTGGTCCAAATTCCATTTGGACTACAACCG
CATTAGGCGACGTATATGTATTCGATCCTGTAATCGCCGAGGAATGTCAATTGTCCGAGAACGGCTACGTTCAAGAAATG
GATGTTGCTGGCAAAGCTGTGCCATTCGAAAGCATTTTACAAAACGGCTTCGGCTGTGGTAGCACTCTAAAAATTAGCGT
ATGCATCCATGACGATGCTGACAGGTTGGCTTTCAATCTTGTCTGTTACACCACGACATTCGTGAAGCAGAAGACTGTGA
CCGAGAGTCACGACGTAGCTTTGCACTTTAATCCAAGACTAAAGGAGAATATTATCGTGCGGAACACATATCATAACGGC
CAGTGGGGAGATGAGGAAAGAAATGGCGGTAGCCCGTTGAAGGCAGGCTGTGACTTCACGTTATATATCGTTTGCGAGGA
ACGCGGTTATAAAATTTATATTAACGATAACGAATATACTTTTTATAGTCATCGAATACCTCCGCAAAGTATTACACATT
TGCGTATCAAGGGATTGTTGACTTTATGCAGCATTGCGTATAAATCTACGTCTGTAATTATTGAGCCTAGCACGATGTTT
TGGAGACAAATCGGCGGACATCTGAAGAAACTTGAGACATGTTCCGTGGGAGTTACTTGGGGCATTGGCTACGATAGCAC
CGCTTGGGTATACACAGGTGGTTGGGGAAGCGCCTTTCTCAAAGGCCTGGAAACTAGTAATACCGGAATAAATACAATGG
TGGACACTCACAATTATTACGTTTACGAGAATCAACGTTGGAATCCGGTGACTGGATATACCGCGCATGGTCTTCCAACA
GATCGTTATATGTGGAGCGATGCAACTGGGCGGCGGAAACGCACACGAGAGCATACAAAGTTGTTGTCGATGCATTGGCA
CTGGGTATCGGACTGGATCGTTGACTTCCACACACCTGGCGGCGTCGACAGAGATGGATGGCAGTACGCTATGGACTTCC
CGTTGCAATTTCACGGCAAGAAACAGTTCACCGATTACGTACGAAGAAGACGGTGGTTTAGAAGGTGTCAACTAACAACT
AGCGGACCTTGGCAAGAGCTGGGAAATACCAAACTCATTGATGTCTCTTTATACGTGAGCGGAAAACCTGGCACAGATGC
TCCCATTCATGTCTGGGCAGTCGCTGCAAATGGTGAAGCGTTATTCAGACGAGGCGTTTCGGAATCTTGTCCAATGGGAG
TGTCATGGGAGCACATACCAAGTGATCAGCCTTTAATTGGTATATCGTGCGGCCCGTACGGACAAGTCTGGGCCGTTGGA
AAGAATGGTTCTTCCTGCTGGAGACTAGGAATCAGCGCTACAAAACCAACTGGTGTACAATGGCAGAACGTCGAGCCGCC
ATCAGGAGCTCACTTGAAGCAGATTTCTGTGGGACACGATGTAGTGTGGGCTTTGGATACATTAGGTAGACTGTCGGTGC
GCCGAGAGATACAATCGAATGTTTTCCCCGAAGGAACGCACTGGCAAACGTTACCCGCCATGCCGAACGATCCTATTCAT
ATAGACGTGTCGGTGGCAAATACTAAGCAAGGATTCCGATACGTTTCCGTTTCGAGGGAGCAGGGACAGGTCTGGGCGAC
TTCAGGTGCCGGCATTATCTGTCGAAGAATTGGTATCACTGGTGAAAATACAGCTGGAACCGGATGGGTGACCGGCATAG
GGGCAAACTGGCAAAACATAAGTCTTGGTGGGCTTGTAAATAAGACAAAATGA
PEP:
>LH12674-PA
MPSSYLYAINNEGRVFGLSTSGNMWREFMYLGLEFKQLSAVPHFMWAIGGDRQVYVHVHGLDVPIRIKEETYENERWLPL
EGFSGRLLPTDRYNFSNQDGTVDRSRDKVKLPSMAWQWEGDWQIETTLDGQPLDHDGWTYAIDFPATYTTKKQWKSCVRR
RKWVRYRRYSAMNSWCAIAPLHKDPTKEPFIDVAVGGNQMPGSSSGNLVVWAVTAHGRVMFRVGTSTTCPEGQRWSSIKL
ANGHEVSQISVGVTGLVWAALQSGKALVRTGVTRDNPMGDDWSEVDPPQKDLRLVQVSVGTDAVWAVTHDAGVWFRKGVQ
GEISGVCEQLATGTGWVEMLSKMALVSVAPNDQVWAIGYDDRCLYYRTGITRSELTGKRWKLINAPLQLSRASSNASLSS
SNRHSTCGTPQQQRHQSWSSLSRPHSTSEGTALIREWEEQSRSAPTPTSLKLWQRTGDGISAKNMQQTSFQDIYLNEERK
RSANSVDINDLNEASVASITISNESLTKSGESIVVLGKGMGSTVKINPAAWSPVHSVGSMVGVEAHPESDGSVFDPDLTG
DSGVYGEDESAEIIYWAECDVLWYKVEAGACFVDPTNPPKWILDGNGIVQGETGESWRVYILDELKSRLKKMPFDSSTEY
EKAVEKSSWVKTGDAKCKIKNGNLYEDCKIELEWISSDTGSLDSGTLIILNSDGVTSIIQFPISEITCVVCCSEPGNPRI
AIHTPKLRRTKVIRLQFASDTEMEDWLAHLTSVSCQMNNVYGRPGPNSIWTTTALGDVYVFDPVIAEECQLSENGYVQEM
DVAGKAVPFESILQNGFGCGSTLKISVCIHDDADRLAFNLVCYTTTFVKQKTVTESHDVALHFNPRLKENIIVRNTYHNG
QWGDEERNGGSPLKAGCDFTLYIVCEERGYKIYINDNEYTFYSHRIPPQSITHLRIKGLLTLCSIAYKSTSVIIEPSTMF
WRQIGGHLKKLETCSVGVTWGIGYDSTAWVYTGGWGSAFLKGLETSNTGINTMVDTHNYYVYENQRWNPVTGYTAHGLPT
DRYMWSDATGRRKRTREHTKLLSMHWHWVSDWIVDFHTPGGVDRDGWQYAMDFPLQFHGKKQFTDYVRRRRWFRRCQLTT
SGPWQELGNTKLIDVSLYVSGKPGTDAPIHVWAVAANGEALFRRGVSESCPMGVSWEHIPSDQPLIGISCGPYGQVWAVG
KNGSSCWRLGISATKPTGVQWQNVEPPSGAHLKQISVGHDVVWALDTLGRLSVRREIQSNVFPEGTHWQTLPAMPNDPIH
IDVSVANTKQGFRYVSVSREQGQVWATSGAGIICRRIGITGENTAGTGWVTGIGANWQNISLGGLVNKTK
Swiss-ProtTectonin beta-propeller repeat-containing protein
KEGG     K17988     
SUPERFAMILYSSF49899  Concanavalin A-like lectins/glucanases superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF00337  Gal-bind_lectin; Galactoside-binding lectin     
SMARTSM00908     
ProSiteProfilesPS51304  GALECTIN; Galactoside-binding lectin (galectin) domain profile.     

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