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Gene detail [Fasta]

Species Linepithema humile
GeneLH12679
Positionscf7180001004631:769356..773391[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12679
sequence mRNA: 
>LH12679-RA
ATGTGCGACACGGACATAGTGCAGGATCTGCCGGCGCAGTTGACTTCGGAGGAGGAGGAGCGCAGCCTGAAACATTTCGG
CACCCTGTTGACCGGCAAGACGACGCAATCGCTACGTCGCGACGATCCGAATCCGACGTCGGTGTACAACAGCGCGTACA
ACTACTTGGCGACCGGTCGCTTCACCTTCCACCGCAAGAATCTTTATTATTCGTTCCATCTGTCCGCGTCGACGCCGCGG
CCGCACAGCATACAGTTCGTCGACGGTTCCGGTAGTATTTTGGAGGAGCAGACGATCGATCCGATCGGCGGCGCTTACCA
GAACGCCACCGGCAAGCTGTGCGGTGTGTGGCGACGCGTGCCGCGCGATTATCGGAAGCTGCTGCGCGAGGAACGCCTGC
ACGTGTCCTTCCTCTGGGAGCCGTCGTCGAGCCTGTCCGGCCAGCTGTACCGGTACCGCGCGCTGTCGACCGAGCAGTTT
TCTTCGCTACTGGAGCCGACGATGGGCGTGGACCGGTCGTTGATGTCCGGCGCGGGCGCGACCGCGATCGTCTCCGCATC
GTCGACCTCGGCCCCGTCGATCCACGTGTCGCTCGTCTTCAACGGCCTCTTCCTGCCGAACGACGTGGCCGATATTCCGT
TGGTCGTCCAGCTGGAGCATCAGGAGAAAGATTACATAGTTCTGCATGAGGAGATAATAGTGCGCAAGCCGTCGAACGAG
CTGAATTTCGGCGAAGTCCGCAGCGCGCTCTCCGGCGCCGATTTGCGTCTGTTGACTCGAGGCAAGCTGTCGATCAGCAT
AATGTCGCGCAAGGATCCGCAGGCCCTTCGACTCACCGGCGCAGTCGGTCCGCGCGCGACCTGCGACATGTATCAAACGC
TGCTTCTGTCGGAGTCGCCGTCCGTGGCGTCCGGACTGGCCTGGGCCTATCTGGATCGCATTGGCGCGCTGCACTACGGA
GTTCAGCTGATAGGGCTCGAGGAGGAGAGCCCGCTCGTAACGCTGGTGGACGAGGGCGGCAAACGGCGGATGGAACTCGA
AGATTTGACGCCTTCGTTGGTCGACGGCTTCGCGAACGGTTCCCTCGACCGGCCCGGACCGCGACTCCTGCAGCCGCTCT
TCAACGAGGAGCTCTCCGTGGTCGCCGCGAGCCATCTTGGCTCCATTCTGCGCGGCAGACTTCTCGGCAGACCCGTCGCG
GACGCCAGAGACACCGCCGCGCCCGTGCTGCTGCGTAGATTGACTCAGCAGCAGTTAAGTCCCGGACCGGTCGGTCTCAT
ATGGACAGCGGTGGATCTAGACTGCTCGCTGCACTACGAGCTGGAGCTCGCGGGCTTCCCGCCTTCCGCGCAGGAACCGC
GAACGTTCCGTTTGTACCTGGAGACGATGCCTCTGCTGGCGCAGGGAGCTCCCGTCGCCAGAAGGCTTCTGGAGGAATTT
ACGGGATACTCCTTGGAGGGTTCCGTCACCGGACTCACGCCGATCGAGCTCTACAGGATCGAGTCGGGCATCGGATTCCT
GGAAGTGACGGACAAGCAAGCCAGTTATATTCTCAAGGCGCCGTTCAAGACACGGGCGCCGTTCAGCTGCCTGCCGCACT
ACGCCGACAACGACGTCGCCTCCGTGGTGGCGTACAATCTGCAGCCGCCCAGATCGGATATCGAGACCGGCGCGTGCTTC
CACGAAATCAGGTTCTACGAGGAGGGCACGCAGTGGACGTCGAGCGCGGATCCGTGCTCGATGTGCCATTGCTATCGCGG
CTTGGCGCAATGCGACACGGTGCCCTGTCCGACGGTCTCCTGCGCGCCGGGAAAACAGCTGAGGCAGCCGCCAGCCGGTC
ATTGCTGTCCGATTTGCGTTGCGCTGGCGACCGAAACTAACGCAACAATCAAGAGCAACATCACGAGAGGCTGTACACTG
GCCGGACAATATCATCTGGCAGGATCGTCCTGGCATCCGTACCTGCCACCGGTGGGATTCGATACTTGTGCAGTTTGCAC
TTGTGACGCTGTCACGCTGGAGGTGAAATGTCCGCGGGTGCAGTGCCCGCCGCTCGAGTGCGACGAGAAGGTCGCCTTCA
GGCCGGACAAGAAGGCCTGCTGCAAGCAATGCCCGGCGACGACGCCTCGCAGCAACGCGGCCACCACCGCTGCGAGCGAT
ACCGCGCACCTGCCGAGGGATCAGGCCTTACCGCCGACGCGGCGCACCGCCGAGGAGATACTGTCGTCCGGCGGCTGCAA
GTCACCCCTCGGCACGGCCTACGAGAACGGCATGGAATGGCATCCGCGAGTGCACTCGCACGGCGAGATGAAGTGCGTGA
AGTGCCGCTGCAAGGTGAGAGAATCCGCTTTGCGAAATCTTTGA
PEP: 
>LH12679-PA
MCDTDIVQDLPAQLTSEEEERSLKHFGTLLTGKTTQSLRRDDPNPTSVYNSAYNYLATGRFTFHRKNLYYSFHLSASTPR
PHSIQFVDGSGSILEEQTIDPIGGAYQNATGKLCGVWRRVPRDYRKLLREERLHVSFLWEPSSSLSGQLYRYRALSTEQF
SSLLEPTMGVDRSLMSGAGATAIVSASSTSAPSIHVSLVFNGLFLPNDVADIPLVVQLEHQEKDYIVLHEEIIVRKPSNE
LNFGEVRSALSGADLRLLTRGKLSISIMSRKDPQALRLTGAVGPRATCDMYQTLLLSESPSVASGLAWAYLDRIGALHYG
VQLIGLEEESPLVTLVDEGGKRRMELEDLTPSLVDGFANGSLDRPGPRLLQPLFNEELSVVAASHLGSILRGRLLGRPVA
DARDTAAPVLLRRLTQQQLSPGPVGLIWTAVDLDCSLHYELELAGFPPSAQEPRTFRLYLETMPLLAQGAPVARRLLEEF
TGYSLEGSVTGLTPIELYRIESGIGFLEVTDKQASYILKAPFKTRAPFSCLPHYADNDVASVVAYNLQPPRSDIETGACF
HEIRFYEEGTQWTSSADPCSMCHCYRGLAQCDTVPCPTVSCAPGKQLRQPPAGHCCPICVALATETNATIKSNITRGCTL
AGQYHLAGSSWHPYLPPVGFDTCAVCTCDAVTLEVKCPRVQCPPLECDEKVAFRPDKKACCKQCPATTPRSNAATTAASD
TAHLPRDQALPPTRRTAEEILSSGGCKSPLGTAYENGMEWHPRVHSHGEMKCVKCRCKVRESALRNL
Swiss-ProtDorsal-ventral patterning protein Sog
KEGG     K04657  CHRD; chordin     
SUPERFAMILYSSF57603  FnI-like domain superfamily     
Gene3DG3DSA:2.10.70.10     
PfamPF00093  VWC; von Willebrand factor type C domain     
SMARTSM00754     
ProSiteProfilesPS50184  VWFC_2; VWFC domain profile.     
ProSitePatternsPS01208  VWFC_1; VWFC domain signature.     

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