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Gene detail [Fasta]

Species Linepithema humile
GeneLH19836
Positionscf7180001004973:609857..613330[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19836
sequence mRNA: 
>LH19836-RA
ATGGCAACAATAGAGGTTTCATTCCTACCGAACGGGCCACCCGCGAAAATATTGAAATGGAAGGTACGCTCGGACACAAT
GGTCGCGACGGGTAGAGTGTTGTTGCTGTACCAAAATTCGACGCCAGATACGAACGAGAATGATGCCAAGGAGCCTGAGA
AAAAGCTGCGAGCTACAACATTCGGCCGTGTTAAGCAAATCCTGGCCAAAGAGGGTGACATCGTTCAGCCTGGGCAAGTG
ATAGCTCTATTGGAAGGATGTACACACCCTACTGTTATGATAGACTTATGTGCGGAATGTGGCGCAGATTTAAGGGTACA
AGAATCTGGCAAAAATGGAAATACCGCTGGAGTATCACAAGCTAGTGTGCCTATGGTACATAGTATACCAGAATTGAAAG
TATGTCCAGAACTAGCTGAGAAAATTGGAAAAGAGGATGAGCAACGTCTTTTAAAAGATCGGAAGTTGGTGCTACTTGTA
GATTTAGATCAAACAATTGTTCATACCACAAACGACAATATTCCACCTAATTTGAAAGATGTTTTTCATTTTCAATTATA
TGGACCAAATTCTCCATGGTATCATACCAGATTAAGACCAAATACCAGGCATTTTCTCTCGGAAATGAGTCAGTTGTACG
AATTACACATTTGTACTTTTGGAGCAAGGATTTATGCACACACTGTTGCATCATTGCTAGATAAAGATGGAGTTCTGTTT
TCTCACAGGATACTTTCTAGAGACGAATGTTTTGATCCAGCATCAAAAACTGCAAATCTCAAAGCTCTGTTTCCATGCGG
CGATGACTTAGTGTGTATCATAGACGATAGAGAAGATGTATGGCAAGGATGTGGAAATTTAGTTCAAGTCAAACCTTATC
ACTTTTTCCGTCATACAGGCGATATTAATGCACCACCAGGATTGGAAAAGAGTGACTTATTACGCTTGCCTGACCCGATG
AATACAAATGAATTATGTGTAAATGATTTGCAGAATAAAGACAGTACGAATGGCGTGTCTGAATCATCAAGTGAACCCGC
ACAATTATCGTCAGATAATTCTTCAGAAAAAGAAATAAATCATCAAGAAGATAAAAAAGATGAGAAAACTGAAAACACAA
CGAACGAAACAAACGAAATAAAGAATGGAGATACCAAAGCAAGCGTTGGAAAAGATGAAGAGTCCAATGTTCAGTCTAAC
ATTACAAATAAGGATGATAAAGAAAATAAAGAAATGCCGAAATCTGAATCTGAACTTGAACCTGATCCTGAACTTGAACT
TGAACCAAAACCTGAACCTAAACCTGAACCTGAACCTGAACCTGAACCTGAACTATCTACAGAAAAGGATAGTAAACAAA
AAATGCCAAAAGAGGAGAATAACATAATAGACGAAGATGATGATGATTATCTGTTATATCTGGAAGATATTCTTCGAAGA
ATTCATACGGAATTTTATGCTACATTGGATCAAGGCAACGGTCGAAAATCTTTGCGGGATATAATCCCACGAGTGCGTTC
GCAAGTTTTGAAAGGATTATGCTTGACTTTTAGCGGTTTGATACCTACTCATCAGAAGCTTCACCAAAGCCGCGCGTATA
AAGTTGCGAGAGCTTTCGGAGCAGAAGTAACTCAAGATTTGACAGAGAAAACTACACACTTAGTCGCCATTAGAAAGGGT
ACGGCAAAAGCGAACACAGCTAGAAAAGATGCAAACATAAAGATCGTAAATCCGGAGTGGTTGTGGACGTGCGCAGAGCG
CTGGGAGCACGTGGACGAACGTTTATTTCCTCTTACAACACAGGCCCGCGGATCGAGAGTACCACCGCCACACTGCAGTA
GTCCCGAACGTATTGAAGACATAGAAAATGACAGCGCAAGCTCTTTCGCCAATTCTATTAATCCATTAATGTCGTTCACT
CAAGAAGAGATCGAATTTATGGATAAAGAAGTAGACGAAGACATGGAGGAACAAGATATAGTTTTTGAAGATGGGGAAGA
TATGGAAGATATGGAAGACATGGAAGATATAGAAGATATGGAAGATATGGAAGATATGGAAGACATGGAAGACATGGAAG
ACATGGAAGACATGGAAGACATGGAAGATATAGATGACATACAAGAGTGTGGTAGAAGGATACATCGACGAAGTTCTGAT
TCCGAAGATTCTATGAACGATGAATTGGGTGTATCCAAAAGAAAGAAAAGAAAGATTTACAATGGCAATTCTGATAAAAG
CTCTTCAGAAGATAAAGATGATAATAACGACAGTAATGATGACGATGATGATGATGATGATGATGATGATCTTGCTGCAC
GTTTTAGACGAGGAGGAGATTTACCTGATGATTTAGATCTAGATGATAATTCACAGGATGATTCAATAGATGATTTTGAA
GAGGGGGACAATGAAGACGATCGAGAGTGGAATGCGCTAGGTGCTGCGCTTGAAAGAGAGTTCCTCTCTGAGTGA
PEP: 
>LH19836-PA
MATIEVSFLPNGPPAKILKWKVRSDTMVATGRVLLLYQNSTPDTNENDAKEPEKKLRATTFGRVKQILAKEGDIVQPGQV
IALLEGCTHPTVMIDLCAECGADLRVQESGKNGNTAGVSQASVPMVHSIPELKVCPELAEKIGKEDEQRLLKDRKLVLLV
DLDQTIVHTTNDNIPPNLKDVFHFQLYGPNSPWYHTRLRPNTRHFLSEMSQLYELHICTFGARIYAHTVASLLDKDGVLF
SHRILSRDECFDPASKTANLKALFPCGDDLVCIIDDREDVWQGCGNLVQVKPYHFFRHTGDINAPPGLEKSDLLRLPDPM
NTNELCVNDLQNKDSTNGVSESSSEPAQLSSDNSSEKEINHQEDKKDEKTENTTNETNEIKNGDTKASVGKDEESNVQSN
ITNKDDKENKEMPKSESELEPDPELELEPKPEPKPEPEPEPEPELSTEKDSKQKMPKEENNIIDEDDDDYLLYLEDILRR
IHTEFYATLDQGNGRKSLRDIIPRVRSQVLKGLCLTFSGLIPTHQKLHQSRAYKVARAFGAEVTQDLTEKTTHLVAIRKG
TAKANTARKDANIKIVNPEWLWTCAERWEHVDERLFPLTTQARGSRVPPPHCSSPERIEDIENDSASSFANSINPLMSFT
QEEIEFMDKEVDEDMEEQDIVFEDGEDMEDMEDMEDIEDMEDMEDMEDMEDMEDMEDMEDMEDIDDIQECGRRIHRRSSD
SEDSMNDELGVSKRKKRKIYNGNSDKSSSEDKDDNNDSNDDDDDDDDDDDLAARFRRGGDLPDDLDLDDNSQDDSIDDFE
EGDNEDDREWNALGAALEREFLSE
Swiss-ProtRNA polymerase II subunit A C-terminal domain phosphatase
KEGG     K15732     
SUPERFAMILYSSF52113  BRCT domain superfamily     
Gene3DG3DSA:3.40.50.10190     
PfamPF03031  NIF; NLI interacting factor-like phosphatase     
SMARTSM00292     
ProSiteProfilesPS50969  FCP1; FCP1 homology domain profile.     
TIGRFAMTIGR02250     
OrthologiGroup-00937    RNA polymerase II subunit A C-terminal domain phosphatase      

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