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Gene detail [Fasta]

Species Linepithema humile
GeneLH15530
Positionscf7180001004861:1331629..1336920[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15530
sequence mRNA: 
>LH15530-RA
ATGGGAGTGCCTGCGCGGGGAGCACTCGCGGCGATCGTGGCGGTAACCGCGCTCGCCGTGTACCTCAACAGCCTAGGCTG
CGGCTTCGTCTTCGACGATATCTCGGCGATCAAGGATAACCGCGATCTCAGACCCCACACGCCTCTCAAGAATGTCTTCT
ACAATGACTTCTGGGGCACCCCGATGCATAAGGAACAATCGCACAAATCTTACAGACCTCTTTGCGTTCTCACATTCCGA
TGGAATTACTTAATTCATCAGTTGGATCCTATGGGATATCATCTGCTAAATGTTCTTCTACATGTTGGAGTATGCCTATT
ATATTTCAGGACCTGTTTGATGTTTCTACCAGATGCAGCAAGTTTTGTGTCATCTTTATATTTTGCTGTGCATCCTATAC
ACACAGAAGCAGTCACAGGTGTAGTTGGTAGGGCAGAGACTTTGTCCTCCTTATTTTATCTGGCAGCTTTAATCACATAC
ACTAAATGTTGCAAGAGCAAACGATCTACAGGGTGGAAATCCTTGATACTGTCTATGTTTTTTGTATTTACTGCAATGCT
GTGCAAGGAACAGGGAATCACTGCCACTGCGGTTTGTGTATTGTACGAAATTTTTGTTGTACAGAAGGTTAGAGCAAGGG
ATATTTTCTTAGCACTAAAGTCAGCTTTTGGTGGTAATAAAATTTCACCTGCATGGTCAGGCGAGGGTACAAAACGTCTG
ACAGCCCTTACACTTGTTACATTTAGTCTGCTTATCCTACGATTACATATAATGGGCTCAAAGTTACCTGTATTTACCAG
ATTTGACAATCCCGCATCGGTTGCTGCCACACCAACGAGACAGCTTACGTATAATTATCTGGCCGCAGTAAATCTAAGAC
TGCTATTTCTTCCAAGTGATTTGTGCTGTGATTGGACAATGGGAACGATACCATTAGTAGAAAGCTTTACCGATGTTCGC
AATTTCGCAATCCTAGCTACACATGGAACTGTATTCGGACTACTCGTGACAGCTGTTATAACACGTAGCAGACAAACATC
TGTCATTCTCATTATGAGTTTGGCTATGATGATACTCCCTTTTCTCCCTGCATCAAATCTTTTCTTTCCGGTCGGATTTG
TAATTGCTGAGAGAGTGTTGTACGCACCTTCTATGGGGTTTTGCATGCTTATTGGATATGGATGGAGCATTTTGGCGGAT
AAGAAGTGCAAGAAGCTAGTGCTATTTCTACTCATAACGCTTTTAGCGTCCCATACGACGAAAACGTTCGTCAGAAATTA
CGATTGGTTAGATGAATACTCGATATTCATGTCTGGTTTGAAAGTGAACGATAGAAATGCTAAACTATTCAATAACGTGG
GCCACGCGTTGGAAAGCCAAGGTCGTTTTAAGGAAGCATTGAATTTTTTCAATATGGCTGTACATGTTCAGGGTGATGAC
ATTGGAGCACACATTAATGTTGGACGAACTTACAATCATTTGAAAATGTTCAAGGAAGCCGAAGATGCTTATTTAAAGGC
AAAGTCATTATTACCGAAAGCGAAACCGGGAGAATCCTACCAAGCACGTATAGCACCAAACCATTTAAATGTGTTTGTTA
ATTTGGCTAACTTGATAGCTAAGAATGCAACTAGATTAGAAGAGGCTGATTTGTTATACAGACAAGCTATCAGTATGCGC
GCGGATTATACTCAAGCATATATTAATCGTGGCGATGTTTTAATTAAACTTAACCGTACAAAGGAAGCTCAAGAAGTTTA
TGAACGAGCGCTATTTTACGACAGTAATAATCCTGATATCTATTATAATCTTGGTGTTGTATTCTTGGAACAAGGGAAAG
CGTCCCAAGCTCTGGCATACTTGGATAAAGCTTTAGAATTTGATCCAGAACACGAACAAGCGTTACTGAACTCCGCTATA
TTACTCCAAGAATTAGGGCGGGCAGAATTACGTAAAGTGGCTAGAGAAAGGCTCCTAAAACTTTTACGGAAGGATTCTAA
TAACGAGCGCGTACACTTCAATTTGGGAATGCTGGCCATGGACGATCATGACAGCGGTGCCGCGGAACGTTGGTTCCGCA
ATGCTGTCGCATTGAAGGAAGACTTCCGCTCCGCATTATTCAATCTCGCGTTACTGTTGGCGGACGAGCAACGTCCGCTC
GAAGCGGCACCGTTCTTAAATCAATTGGTCAGATTCCATCCGGATCACATAAAAGGCCTAATTCTGTTGGGAGACATTTA
CATCAACAACATAAAGGACCTAGACGCTGCGGAAAATTGCTACCGCAGAATACTGCAACTGGATCCCGCCAACATTCAAG
GACTGCACAATCTCTGCGTCGTGATGGTGGAACGCGGTAAATTAGGTTTAGCGGCGCAATGTCTGGAACATGCTGCCGCC
CTCGCGCCGCATCAGGACTACGTACAGAGACACCTGTCGATTGTGAGAGCTCGCATTAATCGTCAATCGCCGGAGGAACG
CGACACCGATGTCTTCGACGATTCTTTTTGGAACAGCAATGTGAACGATAGGCCCTTCAACACGGAGGCGTCGGAAGGGC
AATTTCTGGGCAAAACGGATTCCGTATTCACGAATCACGCGACGGTTCACAATCACATAGGCAGTAAGCAAAGCAATACC
GATTCTCTGAGTAATATTATACACTTAAAAGGTCCATCAAAACCTGCCCGGGCGATGAGCGGCACAACGGAAACGAAAGA
CGGGCAGCGTCCTAAGCAAGCGGTCCCCGAGCTGAGTAATATCGTGGAGCCTACCACGGACAGGGTTTTCGATAGGATTA
TAAGCGCTGACGTAACGAAGCTAGATATCACGCAGAAGCACGGCTCAAAACACGCAAATTCCGATCAGTTCAATCAGAGC
GCTGCCGCGACAGTCGGCGGCAAGCAAGGTATTCAACAGACAAAGGACAGTGCGTTGTCATAG
PEP: 
>LH15530-PA
MGVPARGALAAIVAVTALAVYLNSLGCGFVFDDISAIKDNRDLRPHTPLKNVFYNDFWGTPMHKEQSHKSYRPLCVLTFR
WNYLIHQLDPMGYHLLNVLLHVGVCLLYFRTCLMFLPDAASFVSSLYFAVHPIHTEAVTGVVGRAETLSSLFYLAALITY
TKCCKSKRSTGWKSLILSMFFVFTAMLCKEQGITATAVCVLYEIFVVQKVRARDIFLALKSAFGGNKISPAWSGEGTKRL
TALTLVTFSLLILRLHIMGSKLPVFTRFDNPASVAATPTRQLTYNYLAAVNLRLLFLPSDLCCDWTMGTIPLVESFTDVR
NFAILATHGTVFGLLVTAVITRSRQTSVILIMSLAMMILPFLPASNLFFPVGFVIAERVLYAPSMGFCMLIGYGWSILAD
KKCKKLVLFLLITLLASHTTKTFVRNYDWLDEYSIFMSGLKVNDRNAKLFNNVGHALESQGRFKEALNFFNMAVHVQGDD
IGAHINVGRTYNHLKMFKEAEDAYLKAKSLLPKAKPGESYQARIAPNHLNVFVNLANLIAKNATRLEEADLLYRQAISMR
ADYTQAYINRGDVLIKLNRTKEAQEVYERALFYDSNNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLNSAI
LLQELGRAELRKVARERLLKLLRKDSNNERVHFNLGMLAMDDHDSGAAERWFRNAVALKEDFRSALFNLALLLADEQRPL
EAAPFLNQLVRFHPDHIKGLILLGDIYINNIKDLDAAENCYRRILQLDPANIQGLHNLCVVMVERGKLGLAAQCLEHAAA
LAPHQDYVQRHLSIVRARINRQSPEERDTDVFDDSFWNSNVNDRPFNTEASEGQFLGKTDSVFTNHATVHNHIGSKQSNT
DSLSNIIHLKGPSKPARAMSGTTETKDGQRPKQAVPELSNIVEPTTDRVFDRIISADVTKLDITQKHGSKHANSDQFNQS
AAATVGGKQGIQQTKDSALS
Swiss-ProtTransmembrane and TPR repeat-containing protein CG4050
SUPERFAMILYSSF48439  Protein prenylyltransferase superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13414  TPR_11; TPR repeat     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     
OrthologiGroup-00070    Transmembrane and TPR repeat-containing protein CG4050      

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