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Gene detail [Fasta]

Species Linepithema humile
GeneLH15520
Positionscf7180001004861:1351236..1357439[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15520
sequence mRNA:
>LH15520-RA
ATGTTTAAGGAACAATTAGACGTCTTGAGAAAGCTAGCGCCCAACGTCGACGTTGCGAAACTTTCGCAGTTGTTGTCGTG
CGCTCATGCACTAGTCACTCAAGAAGCTGTCAGCGTGGGCCTGCCAGATTTTCCTCTGGACAGTTTACCGTCGGCTGCCT
TAATTCTGGACAAAAGCCCCGACTTGTCGGTGCACAATGTCTTCTATAGATTCTATCCGTACAAACTATTCTTGGGCAAG
GAGGGCCAGAGTGCCGTGGAGGATATCCTTGTGACATTTAGCGTCTTGAACGGTTCCAAAAAGGAGCGCACTGTCAATAG
CAAAATAAGCGCCAGCGAGAAAGCGGATGATCTCTTAGAGGTCAACGTGAAGCGCGGCGGTGCGGAAGCAAGCTTTCACG
TTCCCCGCGGCACGGGTCCATTATCGAGTAGCGTGAATAATGATCATTACATAGAGACTAATTATCAAAATAATTTGCTG
GCGAGCATGCTGGAATCTCACTTGGCATCCGATTTCTGCTTGATCGGGCCGAAAGGCTGCGGCAAATCCACCACTGTCCG
TCGGCTCGCTGATTTATTAGGGTATCAAGTGGAGCCGATAGATATGACTTCCAGGGATTTGATACAGCAACGGACCACGT
CGCACAACGGTGACACGGTCTGGAGAAACTCGCCGCTGGTGGACGCGGCGCTCCACGGCAAGCTAGCCGTGCTCGACGGC
GTTAATAGAATTCACTCCAGCACCTTGGCTACGCTGCACAGATTAGTCCACGATCGGGAGTTGCAGTTGCACGACGGTAA
GCGGCTCGTGCGCGCCGATCGTTACGACGAGATCAAAAGGGAGCGTAGCAAATCCGACGGGGAGATGCGCGATCGCGGTG
TCTTGCGAATCGATCCCGCTTTCAGGCTGGTGGCTCTGGCCGAGCCGCCGATCGTCAACAGCTCGACCGGGCAATGGTTG
AACTCCGAGCTGCTCAGCTTGTTCCTCTTTCACGAGATGAGACCGCTCGATAAGCACGAGGAGATTCATATCGTCCGGTC
GAAGTTCGGCGAACCCAGCCAGGCGTTGTTGAATATCGTAGAACTGGCGCACGTGCTGCGCTCGTCCAGCGATCCGACGT
TGCAATCGCTCGCGGGATCGCTCAGCACCCGGCAACTTTTACGAATAGCCGAGCGAATGCACAGATTTAAGGGCGACGAC
GCTTACGGCGCGGTGCAGCGCGCGTGCCTAGCGCGCTTCTTGCCGGCGATCGCGAAGCAGGCGCTCGACGACTGCTGCCG
CCGACTCGACATCGTTCCACCGGAGTCCGCGGTGGACGCGAAAATCGAGTGCACCGTCACGGAGGACATCGTGAGGATCG
GCGACACCGTCGTGGATCGGCATCGCACCGCGGCGCATAGCAAAGTGCCCGACATTCTGTTCTACGACGTGCCGGAGCAC
GTCGCGCTCCTCGAGCGCTTGCTGCAGGACTTCAGTCTCGGGCAGAATCTACTGCTGGTCGGCAATCAGGGCGTCGGTAA
GAACAAGATCGCCGACAGGCTGCTGCAGTTGCTCAATCGGCCGCGCGAGTACATCCAGCTGCATCGCGATACGACTGTGC
AGACGCTCACCCTGCAGCCGATGGTGAAAGACGGCAAAGTCGTTTACGAGGACTCGCCGCTCGTGCGGGCCGTGAAACTG
GGCCACGTGCTCGTCGTCGACGAGGCGGACAAGGCGCCCACGCACGTGACGTGCATACTCAAAACCCTGGTGGAGTCGGG
CGAGATGATTCTGTCGGACGGCAGGCGGATCGTTCCTCGCGCCGGCGGCGACGCGCGCGGCGCGAACAGCATAGCGATGC
ATCCGGACTTCAAGATGATAGTCCTGGCGAACAGACCGGGCTTCCCGTTTCTGGGCAACGACTTCTTCGGCGCGCTGGGC
GATCTCTTCAGCACGCATTCCGTCGACAATCCGAGCGTGCGGAGCGAGATCCAGCTCCTGAAGCAGTACGGTCCGCACAT
AGACGAGCGGACGATACACAAGCTGGTGAAAGCTTTCGGCGAGCTGAGAAGTATGGCCGATCAAGGGCTGGTCTCGTATC
CTTACTCGACACGGGAAGTCGTTAACATAGTGAAACACCTGGAGAAATTCCCGAGCGAGCCGTTAGCCACAGTGGTGCGC
AACGTTTTCGACTTCGATCGATACAGTCAGGAAATATTCGACACTCTGGTGACCGTGCTTCATAAGCATGGAATTCCCGT
TGGAACGAGTCCAACGAATATCGCTTTAGCTAAAGAAATACCTTTGCCCGAGATGAAGATCTGCGGTAGTTGGAACGTTC
TGAGCGCGTTTCACAATATACCGGTTCAGGAAAGATACGTTAAGCTAAAGCCACCGACGTTTCCGGCGCAAAACGACCGA
ACTCTAGATCGAGTTGAGGCTAGATCAGCCTGGTTCACGGAGCTGCAGAGTTACTGGACAATACCTATTAGCGAGAATAG
CACGGTGACCGCTTTGGCGGTCGCGAATGGAAGTAAAGGGGACGGCGCGGACGACAGAATACACGTTCTCACGGCGAATC
CTCTGAGCGTATTTAGCATGACGCCGGAATCCGAGCGAGTTCGCGAAACGCCGTTGCAGGGCTTGATAAGCCCCGTCAGG
GGCAGCACGCCGTTCTATAACGTCGCGGTAGATAATCTCGGAAATGTTTTGGTTCACGAGGAAACTAGCAATTCCATACT
CGTGGTGAACGTAAACGAGGGGTCCGTGCGAGAATTGCAAATCTCGTCGTTTTTGGATGCCGCCGGCGACAGAATATCGA
ACGTCTTTAGCAGAGGCAGGAGTCTGTGGAAGATGAAAACGGAGTTATTATCGTCCCATGATCTGATTGTCTTATATACG
CAGGATCAGGACAAGCTCGAGGTTATCAATTTGCAGAACATGTGCGCTTACTCGATGAATTTGCCTTGTAACGTCGAGTC
GGTTCTGCTCGCCTCCGAGAGGAAATGGTTAATTCAGGACACGTCGAAGAATAAGTACGTTCTCGCGAAATTTACAGACT
CGGATCCGTGCCCCAACGTCTTGCGCGAGCTGGATGAATCTAACAGCACCGATCTGAAAACCGGCCGGGTACTGAATTGC
GGCCGAGACAGCCTGCACAATGTGGAGTTGAGCAAAGCTCTCCGGCAGAAAATCGACTGCCCGAACAGACTTCTGGTCAC
CGATAACACATACGCCGGAATTGCGACCGGATTTCCCGATTTAGACAGCTCTAGCGAACTTCATTTTTGGCCGAGGAAGG
AGAGAACGCGCAGCTTTATGACGCCTATTGTCACTCAAAATGGACAAGTGATTAGAACGATTTCGCCCAATCAAGTACCC
GAAGAGGTTTATCCGAGAGACACGAAACGCGCGGGGATTTCCGGTTACTTGGAAATAGTCGACACGGTGAACCACAAGCT
GCGATATATTCCCATTCCGGAACCGGTTAATGTCTCGCCATTGACGCAATGGTTGTACGCGAAAGACTTTCCGCTTTATG
CGTCACTTACGTCGAACGAAGGCCTCGTCACAATAGACGCCGGCGGCTGTGTCCGTCTATGGGAGACATCAATCGCGAAT
ATAGAAAAGTCATTAGGCGCGTGGCGCAAAATGATAGGCGCCGGCGAGGAAAAATTGCAGATCACCAAAGAGAGGTATTC
GGGGCAGGATGTCAGCGGGCCGAAGCACGGGAAGATCGATAAAAATAACGAGCCGCACGTGGGCGGCAATACTTGGGCCG
GGGGAACCGGAGGTAGAGACACGGCGGGCTTGGGCGGGAAGGGGGGACCGTATCGGCTGGACGCCGGGCACACGGTGCAC
CAGCTGAGCGACGAAGAGAAGAATGCGGTACCGGAACATATAAAGAAGGCCGCTCGCGAGATGGGCCTGCGCGCGTTCAA
GCAGCGGCTCAAGGACATAAAAATGAGCGAATACGACCACAAGCTGTACAGCCAGTTCAGCGACGCGGTTCACAATCAGG
TGCAAGCCTTGAGGGTCGTATTAGGCACGCTGCAGGCTAAAAGCAACGAGCGACAATGGTGCCGGCATCAGACGTCCGGC
GAGCTGGACGATACGAAATTAATCGAGGGATTAACGGGCGAGAAAACGATTTACCGGCGTCGCGCGGAGAAAGAGCCGGA
GATTGGCGCCCCGCAATTGAAGCCGAAGCGATTGAAACTTGTCGCGGATGTGTCCGGTAGCATGTACAGATTCAATGGTT
ACGACGGCCGGCTGGACCGCGAGCTGGAGGCTTGCGTTATGGTAATGGAGGCTTTCAGCGGTTACGAGGGAAAGTTTCAA
TATGACATTGTCGGCCATTCCGGCGACGATTATCGTATCGCGTTTGTTGATCACACGCAACCGCCTACGGACAATAAGCG
AAGACTGGAAGTAATTAAGACGATGCACGCTCACTCGCAATTTTGCATGTCTGGCGACAATACGTTGGAAGCGACGCAGC
ACGCAATTGCGAGTCTGGCGAAAGAGGATTCCGACGAGTCTATCGTTGTTGTGCTCTCGGACGCGAATCTAGAACGTTAC
GGAATTCCCCCTGAGCGATTCGCGAGAGTATTGACGTCGAACGCGGACGTGAATTCCTACGCTATTTTTATTGGATCGTT
GGGGGATCAAGCCACCAGATTAATGAAAAAGATGCCCTCCGGTCGCGCGTTTGTGTGCATGGACCTTAAGAATATACCAC
GAATTCTGCAACAAATATTCGCCGCTTCGGTTTTGAGCACGACGCGATCATCGTAA
PEP:
>LH15520-PA
MFKEQLDVLRKLAPNVDVAKLSQLLSCAHALVTQEAVSVGLPDFPLDSLPSAALILDKSPDLSVHNVFYRFYPYKLFLGK
EGQSAVEDILVTFSVLNGSKKERTVNSKISASEKADDLLEVNVKRGGAEASFHVPRGTGPLSSSVNNDHYIETNYQNNLL
ASMLESHLASDFCLIGPKGCGKSTTVRRLADLLGYQVEPIDMTSRDLIQQRTTSHNGDTVWRNSPLVDAALHGKLAVLDG
VNRIHSSTLATLHRLVHDRELQLHDGKRLVRADRYDEIKRERSKSDGEMRDRGVLRIDPAFRLVALAEPPIVNSSTGQWL
NSELLSLFLFHEMRPLDKHEEIHIVRSKFGEPSQALLNIVELAHVLRSSSDPTLQSLAGSLSTRQLLRIAERMHRFKGDD
AYGAVQRACLARFLPAIAKQALDDCCRRLDIVPPESAVDAKIECTVTEDIVRIGDTVVDRHRTAAHSKVPDILFYDVPEH
VALLERLLQDFSLGQNLLLVGNQGVGKNKIADRLLQLLNRPREYIQLHRDTTVQTLTLQPMVKDGKVVYEDSPLVRAVKL
GHVLVVDEADKAPTHVTCILKTLVESGEMILSDGRRIVPRAGGDARGANSIAMHPDFKMIVLANRPGFPFLGNDFFGALG
DLFSTHSVDNPSVRSEIQLLKQYGPHIDERTIHKLVKAFGELRSMADQGLVSYPYSTREVVNIVKHLEKFPSEPLATVVR
NVFDFDRYSQEIFDTLVTVLHKHGIPVGTSPTNIALAKEIPLPEMKICGSWNVLSAFHNIPVQERYVKLKPPTFPAQNDR
TLDRVEARSAWFTELQSYWTIPISENSTVTALAVANGSKGDGADDRIHVLTANPLSVFSMTPESERVRETPLQGLISPVR
GSTPFYNVAVDNLGNVLVHEETSNSILVVNVNEGSVRELQISSFLDAAGDRISNVFSRGRSLWKMKTELLSSHDLIVLYT
QDQDKLEVINLQNMCAYSMNLPCNVESVLLASERKWLIQDTSKNKYVLAKFTDSDPCPNVLRELDESNSTDLKTGRVLNC
GRDSLHNVELSKALRQKIDCPNRLLVTDNTYAGIATGFPDLDSSSELHFWPRKERTRSFMTPIVTQNGQVIRTISPNQVP
EEVYPRDTKRAGISGYLEIVDTVNHKLRYIPIPEPVNVSPLTQWLYAKDFPLYASLTSNEGLVTIDAGGCVRLWETSIAN
IEKSLGAWRKMIGAGEEKLQITKERYSGQDVSGPKHGKIDKNNEPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVH
QLSDEEKNAVPEHIKKAAREMGLRAFKQRLKDIKMSEYDHKLYSQFSDAVHNQVQALRVVLGTLQAKSNERQWCRHQTSG
ELDDTKLIEGLTGEKTIYRRRAEKEPEIGAPQLKPKRLKLVADVSGSMYRFNGYDGRLDRELEACVMVMEAFSGYEGKFQ
YDIVGHSGDDYRIAFVDHTQPPTDNKRRLEVIKTMHAHSQFCMSGDNTLEATQHAIASLAKEDSDESIVVVLSDANLERY
GIPPERFARVLTSNADVNSYAIFIGSLGDQATRLMKKMPSGRAFVCMDLKNIPRILQQIFAASVLSTTRSS
Swiss-Protvon Willebrand factor A domain-containing protein 8
SUPERFAMILYSSF53300  vWA-like superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF07728  AAA_5; AAA domain (dynein-related subfamily)     
SMARTSM00327     
ProSiteProfilesPS50234  VWFA; VWFA domain profile.     

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