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Gene detail [Fasta]

Species Linepithema humile
GeneLH15493
Positionscf7180001004861:1074404..1076868[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15493
sequence mRNA: 
>LH15493-RA
ATGGAACAAATGATTGCACTAAGCACACAGAATCCATTGTCTTTACTAGTTAAGTTTGGTATGATGGCTTGGAACAACAG
TTGTGGAATTGAAAACTGTTCTGGCCACGGGGAATGCCATAATGGAACTTGCTTATGTGAGATTCAATTTGATGGACCGG
AATGTCATATCCCAAATCTAAGCTATTATATTGCCTTTGCCACAATCTTTTTCGTATTAGCTTTTGTTTGTTTGATACAA
CTTGTCACATGTATTGTTGTTGAATGGCAAAAAATGAAGGCACCGTCATTTTTGAGAGCCTGCAGAGTTACCACTCAGAA
ATTATTATATTTTGTAGTTTTTCTTGCATCAGTTATAAGAGGCGCATACTTTACGTCACCGACTTCTTTTAAAGAAGGTT
GGACCAGAAGTTTCCTGTCAGCTTATTATCCATTACTCTTAAGTGGATCATCGTTAATTGTTTGTTTTTGGGCTGAGGTA
GTTCATCTAAGGGACATTCGATGGGACAAGCCTCAGTTTTTATCAAAATCTTTTCTAGCTTTCGTCGTTTTCAACATATT
AACATATTCTCTTCTATTCGCGGAATGCATTACAGCTCAAGCATACTCACAAGAAGATCAAAGCTTTTATACACATATAT
TCAATGGTTGTTACGCAGTACTTCTGTTTATTGTAGTGGTTTTCTTCTTGATATATGGCGTGGAAGTATTTTTCAAGGTT
CGCGGTGGATTCTTAAATGAATATCAAGTTGCTTCCATTGCAACAAATAAACGTACAGCTGACGAAGTGAAGAGCCAAGC
TGAGGATCAAGTAACAGCGAAATTATTTGACCCAGTTCCCTCTACATCTACAGCCGAGCCTTTGCAGATGCAACATGTGA
ACACATCACAATTACATCAGTCAAGATTTGGATTACTCTCTCAAGCATTCATGCTGTTTATAGTAGTGGGTTTCCTATTC
AGTGAGACCCTCAGTGAATTTTGGAAAACAAAAGTACCATTGTATAGTCGAAATTGGCATGACGTTGTATTTCGTGTCAT
TGAAGTTGGCGTAGCACTCTGGTTTCCTTGCGTTTTGTGGAACTGTATGAGCCCAGAGCAATTATGGATTCTAAATCCCA
AGCGTATATTGAAGAAATTAGATCTGGATCAGGGGAAACATATAAAAGAAATCGAATTGCAAGAAAAGAATGCATCTCAA
GAAACCGCATTCCTTTCCGACGCTTCGTCGATTAATAGTAAAGATTGTTGGATTTGTTATGACAGCGACCGACAAGATGC
TGGTCCGCTCATACAACCATGCCATTGTAGAGGTGATGTAAGCGCTGTACATCACGATTGTCTGCGTCGTTGGCTCGTTG
AGAGTTCTGTAAATGCTGACAGTCTCATTTGCAAAGTGTGCAATACAAAGTATAATGTTGAACATGCCAGTCGATTGGAT
TGGCAAAATAGTTTGACTCCACGCCATTGTCTACAAACTATCGCAATTGTTACCACGATGTGTGCATCTTCCGCCGCTGC
ATGGATAGTCATTCAACTTGTAGAAGGGCCAATTATTAGAATGCTCGCAGCTGGAAGTGCATTACTGATTATGTATGTCT
GTATAAGATTCTTAAGTTTGAACACCGTTGTGGCATATCAACGAGCCAAAATCTCGTCGTTAAATATTGTTAACAGTGGT
AGTGAAAGTGATGGAGCTGCACATGTCACGACAATTAGTCATACGATTTCGGTGGACTTAACGAAATCGGATACGGCTTC
GATATAA
PEP: 
>LH15493-PA
MEQMIALSTQNPLSLLVKFGMMAWNNSCGIENCSGHGECHNGTCLCEIQFDGPECHIPNLSYYIAFATIFFVLAFVCLIQ
LVTCIVVEWQKMKAPSFLRACRVTTQKLLYFVVFLASVIRGAYFTSPTSFKEGWTRSFLSAYYPLLLSGSSLIVCFWAEV
VHLRDIRWDKPQFLSKSFLAFVVFNILTYSLLFAECITAQAYSQEDQSFYTHIFNGCYAVLLFIVVVFFLIYGVEVFFKV
RGGFLNEYQVASIATNKRTADEVKSQAEDQVTAKLFDPVPSTSTAEPLQMQHVNTSQLHQSRFGLLSQAFMLFIVVGFLF
SETLSEFWKTKVPLYSRNWHDVVFRVIEVGVALWFPCVLWNCMSPEQLWILNPKRILKKLDLDQGKHIKEIELQEKNASQ
ETAFLSDASSINSKDCWICYDSDRQDAGPLIQPCHCRGDVSAVHHDCLRRWLVESSVNADSLICKVCNTKYNVEHASRLD
WQNSLTPRHCLQTIAIVTTMCASSAAAWIVIQLVEGPIIRMLAAGSALLIMYVCIRFLSLNTVVAYQRAKISSLNIVNSG
SESDGAAHVTTISHTISVDLTKSDTASI
Swiss-ProtE3 ubiquitin-protein ligase MARCH5
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:2.10.25.10     
PfamPF12906  RINGv; RING-variant domain     
SMARTSM00744     
ProSiteProfilesPS51292  ZF_RING_CH; Zinc finger RING-CH-type profile.     
ProSitePatternsPS00022  EGF_1; EGF-like domain signature 1.     
OrthologiGroup-00308    Tenascin-X      

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