Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Linepithema humile
GeneLH12386
Positionscf7180001004585:968203..981785[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12386
sequence mRNA:
>LH12386-RA
ATGGAAGCATTGCGTTTAGCTATACAGACGCGGCTCGGGGAGAGGATGGTCAGCATGAGCTCCATGCTTGTGGAGACAGT
CAGCATAAATTATGAGGATTTTAATGAAAGTTTTTTAACTTGCGGCACCTGTCTCTGCGTTTACGATGGCAGTGAGCATA
CGCCTAAATTATTACCATGCTCACACACGGTATGTTTACATTGCTTAACAAGGATTGCTGCATCCCAAACACGAGAGACA
GGAGCGTTTAGATGTCCCATTTGTAGAGAATTAATAACAATTCCTCGTGGGGGAGTACCAGCATTGCCTCCGAGCTTTCT
CGTAAACCAGCTGTTGGATCTTATGTCCCGGCAAAGACGAGAGGTCATCCCAAAGTGTTCAGTCCACATAAATCAGGAAT
TATTATTTTGTGAAACATGTGATACAGTGTTCTGTACAGTGTGCACTAGCGGCACACACGCGGGAACATCGCCTGGATGC
ACAGAACACACTATTATCCCTTTTAGTATTGCGATAAAAAGGATGTCCGAGATACTGCTTTACAAAGCTAACGAGTGTAT
ATCCAAGTTAACACAGGCGCAAGATTCTGTAAGCACGGAGCTGCAGCGTTTGGAGGCTTCCACGGAGAGATGCTTGAATG
CAGTAGACACAGAGTTCGCGGACATCATCTCGAAGATGGAGAGACGTCGGGCGGAATTGCAAGCTGCCGTAACTTCCGCC
GCTCGCGACAAGAAGCACGTGCTGGAGGAGCAACATTCTCTTATCGAGGCGGAGAAGACCAAGGTGGAGAGAGAGTGCGA
AGGATTGCAATATCAGGTCGAGGTGCGGAATATCACCCAACGTATAAACAGTCTATCGGATCAGCTCGACGCGGCGACCG
CTCTCAGTGAACCCAAAGAAAATGCTTTTATCACGTTCGAGTTTAATCATAACGACGCTGTCTCCCATTTGGAGCAGGCA
CTGAGTAATTTAGGACGAGTACGTTCCAGTACAACGTTACCAGGTTTGTGCCGAGCCAGACTGAAAGATTTAGCGATCGT
GAAATTGCAAACAATCGTTATCGTCGAAACGGTAGATTACCACGGCCATCCCCGAAACGTCGGCGGCGATCTCATCGGCG
CTGAGTTGACACTGGCGGATAATATACATGCGGATAATCAAAGCGCTTCCATCGAGGCGGAAGTGAAAGATCTCGAGAAC
GGAACTTATGAAATTTACTTCCGGCCACCGACTGCAAACCGGTATATTTTGAAGATATCCGTGTTCGAACGACCTATAAA
GGATTATCCGCTATTTTTCGACACGACGGAGCACAATGAACCCATTAAGATCTACGGAAGACGCGGTAATGGAAAAGACG
AGTTCCACCAGCCAGTTTCGGTCGCGGTGGACGACGAAGGAATGATTTATATTTTAGATACTGGAAATTCTCGCATTAAG
GTACTGAATTGTGATTTAGAGTTTCAAAGGCACATAAGCAATGAAGGCTTGGAAGGCCGCAGTTGTACGGGAATTGGTAT
CTCTCAACAGGGTCTCGTAGTCGTGAATTGGCGAACGCGAAAGATTACAGAAATGACTTTGATAGGCGATACAATCCGAT
CCTTTTCGCATAATGCATTTCAAGAACCCATAGATATTGCAGTGGACAAAAGTTATGGGCATATACTTGTCGCTGACAAT
GGCCAAAGCTGTGTATTCGTGTTTGACTCAGACGGCAAGATATTATTCCAGGTTGGCAAGAGAGGCACGTTCAAGCTAAT
CAGTTCTGTGACTGTCGGTCCGGCCGGTGAGATTTTAGTTGCTGACAGTAGGATTCAAGTGTTTTCCGCGAAGGGAGATT
TCTCCGAGGAAATCTATTCCGAGGGCAAAGGAAAAGGCACGTACGGAGGAATAGCGGTGGACGTGGATGGCAAAATAATC
GGTACTCGCACGGACAAGGGTCGTAGCATAATACAAGTGTTGAAGCTAGGCGGAGGTAATATTTTAACCGAAATTGACTC
TCACAGCTCGAAGCTGCGACGTCCGTCGGGCATAGCTGTGCTGCCGGACAATCATCTGGTGGTGGTGGACTTAGAGGATG
CGAAGCGTTCAGTAACTCTTTTTGGACTGTATCGCGGATACGACATTCCTTATGAACTGCTTTGCAGAGTGATCTACAAT
AGACTACCTGGCATTGTCGTCGCGCCGCCGCTGCCGCCGCCGCCGTCGTCGTCGTCGTCGTCGCCGCCGTCGTCGCCGAC
CTGTCGCCGAAAATTCTTTCGGCCGTCGTGTGAAAAATCTCCTCTGGTGGTGGGCGCCCTCAGCGCGAGGTGCCTCCACA
CGCAGGGACGCCAGGCGTCCCAAGGCAGCCGTAGTTGCAATCGGTTGCGCGCGCGCTACTCACGTCGGAGCTCCCGCGCC
CTGAGAGAAAGAGCGGCCGCTGGCCAGAAGGAAGCCGCCAGGTGCGCGTCCGATCCGCTTCCGCGCGCGCGGAAGTGCAA
ATCACCGCCGTCGTCGCCGCTCCGCGAGAGCGTGAGGAAGATGTCGAGCTCGCAGCGTATGCGAAAGTCCTCGCCATGCT
CGAAGCAGGGTCCGATGCGCGCCACCCTGCCCGTGAGCTCGCTGATGAGACAGGGCCGGCAAAGCAGCAACAGCCTCCGC
AAGAGCAACAACAACAGTCCCACCGTCTCGCCCACGAACGCGGCTGCCTGGCGAGCGCGCATCTCGCCGGACACGTCGTC
TTCCTCGGGACAGCGGAGCCCCGGGTCCCTGTCCTACAAAGCCAAATCAAAAACATTGAGCGGCCGCTGTAGCGATAGCT
TAAGTGGAAACCAGAGCATCCGACGAACAGCGTCACTGGACACTATCTATCTGAAAGGACAATGGCCGCGTGAATCCTAT
TATATGCATTCCAGTCTCTTGGTGGACAAATCTACACAGACGGAGGAATGTCCCAATGAACCAAGAAAAATGCATACTCG
TCATCCCACGGAACAAACTGTCACTGATGAGAAATTGGAGAAGAATTATTTCAGGCATCGATTACAACGTACAAATAAAG
AAGGTACTAGCAGTAGAGAGAGGACAGCGGCATTTGGACTAATAATGCCGGGTGGTCCACCACCCGCGCTTCCAGGAGAT
CATTCAGTAATTCTGCCCAGTATTGCTTCACAGACATCCTTGCACAATCAATTTAGCTTGAGTACAAAAGCAAGTCCCAT
GAATATCCCGGTGAAACCAATGAGGCCTCCAATGCGTTCGTCTATCGAAGGACTCAATCAGGAAATAGAAGGACTTGTGC
TCAAAAATACAGCCAATAATAGTGATGCAGACCATCCAATAGAAGACAAGTATGCACGATATCGCGAGCAAATTACACCC
GAAGGACATCGCGCTCCTCTAGCAGACCTATTACGGGCCACCCGAAGTGTCAACACACAAACGCCGGCTACCGACCTTCC
CTCCAGTTCTTATTCTTCAGGCCCTCCATCTAGGAATTCTGAGTCTCCGCTGATTCCTGGTGTTATGGATGCGTCCCGTC
CGCCTAGTGATCTCTTACAAGGTGGAAGCCGTGGTTCAACACCTGAACAAGACAGAGAAGGACGTCTCGGTACTTCTCCT
CACATTAACAAGTTCCTCGCGAGGGAACCACCCGATGGCTGTGAGAAAGTCAACCTCAAATTTGTGGAGGATGCGAGGCG
GCCCATGATAGATTTGAGCAAATTAGACTATTGCCCAAAGCCGTGCGTTCCAGCATTCCAGTTGAAACCCAGCTTGGGAT
CAGCGTTCCTGCCATTGCAACAGCCGGCCAGTCCGACGATGGTCGCCAGTGCATCACCCTCCGCGCATACAACACCGACT
ACACCTCCTCCAAATCCATAGTCCCACTCTTTACCCTGCAGTGTTACACTTGTAAGCTCTATTAGTACATATACATATAT
ATATATTTTTTTTTAACGACCTTGTGGGTAGAAAGTGATTTACTTCGACATAAAGGTATACCGACAAAGAAAAGTTACCG
AACAAAAAAAAAAGAAAGAACGAACAGCCTGCTCCCAGTGCGCCCTATACGTGCGGGCATCGTGGATTGTGTAATTGAAA
AAAAGTTGCAATTGCATCGATACAAAAAGAAAAGTATTGGATAGCATCCGAGCTCCGTTATAATNTTCGAAAACAATAAT
AAATACGAGGAACAATAATTTGTGATAACTAAAGAAAAAAAAAAAAATAAACAAAAAGAA
PEP:
>LH12386-PA
MEALRLAIQTRLGERMVSMSSMLVETVSINYEDFNESFLTCGTCLCVYDGSEHTPKLLPCSHTVCLHCLTRIAASQTRET
GAFRCPICRELITIPRGGVPALPPSFLVNQLLDLMSRQRREVIPKCSVHINQELLFCETCDTVFCTVCTSGTHAGTSPGC
TEHTIIPFSIAIKRMSEILLYKANECISKLTQAQDSVSTELQRLEASTERCLNAVDTEFADIISKMERRRAELQAAVTSA
ARDKKHVLEEQHSLIEAEKTKVERECEGLQYQVEVRNITQRINSLSDQLDAATALSEPKENAFITFEFNHNDAVSHLEQA
LSNLGRVRSSTTLPGLCRARLKDLAIVKLQTIVIVETVDYHGHPRNVGGDLIGAELTLADNIHADNQSASIEAEVKDLEN
GTYEIYFRPPTANRYILKISVFERPIKDYPLFFDTTEHNEPIKIYGRRGNGKDEFHQPVSVAVDDEGMIYILDTGNSRIK
VLNCDLEFQRHISNEGLEGRSCTGIGISQQGLVVVNWRTRKITEMTLIGDTIRSFSHNAFQEPIDIAVDKSYGHILVADN
GQSCVFVFDSDGKILFQVGKRGTFKLISSVTVGPAGEILVADSRIQVFSAKGDFSEEIYSEGKGKGTYGGIAVDVDGKII
GTRTDKGRSIIQVLKLGGGNILTEIDSHSSKLRRPSGIAVLPDNHLVVVDLEDAKRSVTLFGLYRGYDIPYELLCRVIYN
RLPGIVVAPPLPPPPSSSSSSPPSSPTCRRKFFRPSCEKSPLVVGALSARCLHTQGRQASQGSRSCNRLRARYSRRSSRA
LRERAAAGQKEAARCASDPLPRARKCKSPPSSPLRESVRKMSSSQRMRKSSPCSKQGPMRATLPVSSLMRQGRQSSNSLR
KSNNNSPTVSPTNAAAWRARISPDTSSSSGQRSPGSLSYKAKSKTLSGRCSDSLSGNQSIRRTASLDTIYLKGQWPRESY
YMHSSLLVDKSTQTEECPNEPRKMHTRHPTEQTVTDEKLEKNYFRHRLQRTNKEGTSSRERTAAFGLIMPGGPPPALPGD
HSVILPSIASQTSLHNQFSLSTKASPMNIPVKPMRPPMRSSIEGLNQEIEGLVLKNTANNSDADHPIEDKYARYREQITP
EGHRAPLADLLRATRSVNTQTPATDLPSSSYSSGPPSRNSESPLIPGVMDASRPPSDLLQGGSRGSTPEQDREGRLGTSP
HINKFLAREPPDGCEKVNLKFVEDARRPMIDLSKLDYCPKPCVPAFQLKPSLGSAFLPLQQPASPTMVASASPSAHTTPT
TPPPNP
Swiss-ProtTripartite motif-containing protein 2
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:2.120.10.30     
PfamPF00630  Filamin; Filamin/ABP280 repeat     
SMARTSM00184     
ProSiteProfilesPS50119  ZF_BBOX; Zinc finger B-box type profile.     
CoilsCoil
ProSitePatternsPS00518  ZF_RING_1; Zinc finger RING-type signature.     

You might be interested in these researchers

You might be interested in these references