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Gene detail [Fasta]

Species Linepithema humile
GeneLH12385
Positionscf7180001004585:934687..939774[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12385
sequence mRNA:
>LH12385-RA
ATGCAGTTATCGGCGATCACAATTTTGCTCAATATCTTCAGCATCGCTTATGGGAGCAAAGTTTTAGAAGCGAATCCTGA
CACGAAGAGACTATATGATGATATACTGTCCAATTATAATAGATTAATACGTCCTGTTATTAATAATACGGAAACTTTAA
CAGTTTGGCTGGGACTAAAGTTATCGCAGTTAATAGAAATGAACTTGAAGAATCAAGTGATGACAACGAATGTTTGGGTA
GAGCAGAAATGGTATGACTATAAATTACGATGGGATCCAGAGGAGTATGGTGGTATAGAAATGTTATATGTGCCTTCCGA
GAACATCTGGCTTCCGGACATTGTGCTGTACAACAACGCGGATGGAAATTACGAGGTAACGCTGATGACAAAAGCTACTT
TGAAATATACCGGTGAAGTGTTCTGGAAACCACCGGCCATATATAAGTCATCTTGTGAGATTAATGTCGAGTATTTCCCA
TTCGATGAGCAATCGTGCATTATGAAATTCGGTTCATGGACTTACAACGGCGCTCAGGTTATAACAGTGTATATTCATAC
AAGTAATACAGTAGATCTGAAGCATATGAAGCAAGAGCCTGGTAGCAATCTTGTTTTGATCGGCATAGATCTCAGCGATT
TTTATCTATCAGTGGAATGGGATATACTGGAAGTACCAGCAGCACGCAACGAAGAATATTATCCATGCTGCGAAGAACCT
TACTCGGATATCACATTCAATATTACAATGAGAAGAAAAACTCTATTTTATACGGTTAATCTTATTATCCCTTGCGTTGG
CATCACATTTTTAACGGTGCTAGTTTTTTACCTGCCCAGCGATTCCGGCGAAAAGGTATCATTGTGCTCTTCCATTCTTC
TCTCATTGACGGTGTTTTTCTTGCTCTTGGCTGAGATTATTCCTCCAACATCATTGGCCATACCTTTGCTCGGAAAATAT
CTATTGTTCACCATGATTTTAGTTACTCTATCCATTTGGATCACCGTCTGCGTCTTAAACGTGCACTTCAGATCTCCATC
GACACATAATATGTCGCCGTGGGTAAAACAAGTGTTTCTAAATTGGATGCCGAGAATACTAATGATGCGTCGCACACCGT
ATTCTACACCAGAATACGATGATACTTATATGGATAGTGGATATACCAACGAAATAGATTTTAGTGTAAGCGACTATCCA
TTGGAACTAAAGGGAAGTCCAGACGCATTCGAAAGCGTCACTTCTGCATACAAAAGTATCAGAGATGATGATGCACGACA
CGTACCACACGCATCAGTGATTCAAAATATCACTTCAGTTACTGATAGCGAAAACACGATGCCGAAACATCTATCCCCAG
AGGTCATGTTGGCTCTCAAAGGTGTGCGTTTCATTGCTCAACACATGAAAGACGAGGATAAAACTAAAGAGGTCATAGAA
GATTGGAAATTCGTAGCTATGGTTTTGGACAGATTCTTTCTTTGGATATTCACGATTGCGTGTTTCGGTGGCACGGTGGG
CATAATATGCCAAGCACCTAGTCTGTACGACACGCGGAGCCCTGTGGACCAACAACTTTCATCATTGCGTAATTACATAT
ATCCGCCGAACGGGACCGGTCTATTTGACGATATAGATTAA
PEP:
>LH12385-PA
MQLSAITILLNIFSIAYGSKVLEANPDTKRLYDDILSNYNRLIRPVINNTETLTVWLGLKLSQLIEMNLKNQVMTTNVWV
EQKWYDYKLRWDPEEYGGIEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGEVFWKPPAIYKSSCEINVEYFP
FDEQSCIMKFGSWTYNGAQVITVYIHTSNTVDLKHMKQEPGSNLVLIGIDLSDFYLSVEWDILEVPAARNEEYYPCCEEP
YSDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPLLGKY
LLFTMILVTLSIWITVCVLNVHFRSPSTHNMSPWVKQVFLNWMPRILMMRRTPYSTPEYDDTYMDSGYTNEIDFSVSDYP
LELKGSPDAFESVTSAYKSIRDDDARHVPHASVIQNITSVTDSENTMPKHLSPEVMLALKGVRFIAQHMKDEDKTKEVIE
DWKFVAMVLDRFFLWIFTIACFGGTVGIICQAPSLYDTRSPVDQQLSSLRNYIYPPNGTGLFDDID
Swiss-ProtAcetylcholine receptor subunit beta-like 2
KEGG     K05312     
SUPERFAMILYSSF90112  Neurotransmitter-gated ion-channel transmembrane pore superfamily     
Gene3DG3DSA:2.70.170.10     
PfamPF02931  Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain     
PRINTSPR00252     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     
TIGRFAMTIGR00860     

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