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Gene detail [Fasta]

Species Linepithema humile
GeneLH12346
Positionscf7180001004585:408007..412523[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12346
sequence mRNA:
>LH12346-RA
ATGTCTCATCATTACGTGGTGACGGCACACAAACCAACGGCTGTCACTGCCTGCGTAACCGGTAATTTTACTTCACCCAC
GGATTTGAACCTGATATTGGCGAAAAATGTACGCTTGGAGATATATCTGGTGACACCGGAAGGCCTGAGACCTCTAAAAG
AAGTCGGGATCTACGGCAAAATTGCCGTCATAAAATTCTTCAGACCACCGCATGAGAAAAAGGACCTCTTATTTCTGTTA
ACAACACGTTACAATGCTATGATTTTGGAATGTATCGGTGAGGGAGAAGACATTGAAATCATAACAAAGGCTCATGGAAA
CGTCGCAGATCGTATCGGAAAGGCTTCCGAAACTGGGATTAAAGCCGTCATTGATCCGAAAGCACGGGTGATCGGTCTCA
GATTGTACGATGGTCTGTTTAAGATTATACCTCTGGACAAGGATAATCCAGAGCTTAAGGCATCTTCAATACGTATGGAC
GAGCAGCAAGTGCAAGATGTCAATTTTCTTCACGGATGCGCTAATCCCACCTTGATTCTAATCCATCAAGATATTAACGG
CAGACACGTGAAAACACACGAGATAAACTTGAGGGATAAGGAATTTTCAAAGATACCCTGGAGGCAGGATAATGTAGAGC
GAGAAGCCATGATGGTGATTCCCGTACCTTCTCCCATTTGCGGGGCCATCATAATAGGACAGGAGAGCATTATATATCAC
GACGGTACGACATACGTCGCTGTTGTGCCACCGATCATAAAGCAGAGCACTATCACCTGCTACGCGAAGGTGGATAATCA
AGGATTGCGATACTTGCTGGGCGACATGGCCGGTCACTTGTTCATGTTGTTCTTGGAGCAGGAAAAGAAGCCCGACGGGA
CTCAAGTGGTGAAGGATTTGAAAGTCGAGCTGCTGGGCGAAATCAGTATACCGGAATGCATAACTTACCTGGACAACGGC
GTGATATACGTCGGTAGTCGCCTGGGCGATTCTCAGTTGATCAAACTAATCACAAAGGCAGATGAAAATGGATCCTACTG
CGCCCCCATGGAAACTTTCACCAACTTGGCGCCTATCGTCGACATGGCTGTAGTAGATCTGGAAAGGCAGGGCCAGGGAC
AGATGGTGACGTGCTCCGGCGCTTTTAAGGAAGGTTCCCTCAGAATTATCCGAAACGGCATAGGCATCCAAGAGCACGCG
AGCATTGATCTGCCGGGGATTAAAGGTATGTGGGCTCTGAAGGTCGGCGGCGGGAGTTTCGATAATACATTGGTGCTGTC
GTTCGTTGGACAGACGAGAATCTTGACTCTGAACGGCGAGGAAGTCGAGGAGACGGAGATACCGGGCTTCGTCGCGGACG
AGCAGACATTCCACACGGGCAACGTCACCAATGACCTATTTATCCAGATAACTCCGACGTCCGCCAGATTGATTTCGCAC
GAGAGAAAGATAGTGGTTTCCGAGTGGGAGCCGCAGAACAAGAGAACAATCAGCGTGGTGGCCTGCAACGGCACGCAGGT
CCTGTGCGCCACAGGAAACGATCTCTTCTACATGGAAATCTCGTGCGACCAGATCGTGTCCAAGGGATTCGTCACTTTGC
AGCACGAAGTGGCGTGCCTGGACATCTCGCCGCTCGAGGGTGTCACCGAGGCGAAAATCGTTGCCGTCGGACTGTGGACG
GACATATCCGTTCGCATTCTCACTCTGCCCGGCTTGGAAGAGATCAATAAAGAGCTCCTCGGCGGCGAGATTATACCCAG
ATCGATTTTGATGACTTGCTTCGAGGGTAACACGTACTTACTTTGCGCACTGGGCGACGGCAGCATGTACTACTTCACTC
TGCACAGGCAGAACGGCGTGCTCTCGGACAAGAAGAAGGTCACCCTGGGAACGCAACCCACGGTTCTCAGGACCTTCCGC
TCGCTGTCCACGACAAACGTGTTCGCATGCTCGGACAGGCCGACGGTGATTTACTCCTCGAATCACAAGCTGGTCTTCAG
CAACGTCAATCTCAAGGAGGTGAATCATATGTGCTCCCTGAACGCGGAGTCGTATCCCGACAGTCTGGCGCTGGCCACCG
ACAGCACGGTGACGATCGGCACGATCGACGAGATCCAGAAGCTCCACATAAGAACGGTGCCGTTGGGGGAGTCGCCGAGA
CGAATCGCTTATCAAGAAAGCTCGCAGACCTTCGGGGTGATAACAATGCGCGTGGACGTGCAGGAGAGCAGCGGTATGAG
CATCGTCAGGCATTCCGCGTCCACTCAGGCGGCCTCCACGTCCAGCAGCAGTCAGATCGCGTCGCACAACAAGCCGAGCG
GGCACACCGCCAGCGAGATCGGCCAGGAGATCGAGGTGCACAATCTCCTCATCATCGATCAGCACACGTTCGAGGTGCTG
CACGCGCACACGCTGATGCCCACCGAATACGCGCTGTCGCTCATCTCGACGCGACTCGGCGAGGACCCGACGTCCTACTT
CGTCGTTGGAACCGCGTTCATAAATCCGGACGAGACCGAGCCGAAGATGGGCAGGATATTGCTGTATCATTGGAGCGACG
GAAAGTTCGCGCAGGTCGCGGAGAAGGAAATCAAGGGCTCGTGCTACTCGCTCGTCGAGTTCAACGGCAAACTTCTCGCG
AGCATCAACAGCACCGTACGATTGTTCGAGTGGACCGCGGAGAAGGAGCTCAGACTGGAGTGCAGTCACTTCAATAACAT
TATAGCGCTTTACTTGAAGACCAAGGGCGACTTTGTCTTGGTGGGCGACCTTATGAGATCCCTCACACTGCTTCAGTACA
AGACGATGGAAGGTAGCTTCGAGGAGATAGCCAGGGACTACAATCCCAATTGGATGACCGCTATCGAGATACTGGACGAT
GATACCTTCCTGGGCGCCGAGAATTGCTTCAATCTCTTTGTGTGTCAGAAAGACAGCGCCGCGACGTCCGAAGATGAGAG
GCAGCAAATGCAGGAAGTAGGTCAGTTTCATCTAGGTGACATGGTCAACGTCTTCCGGCACGGTTCATTGGTGATGCAGA
ATTTGGGAGAATCGAGCACACCTACGTTGGGCTGCGTATTGTTTGGGACTGTTAGCGGTGCAATTGGTCTAGTGACACAA
ATTCCGTTCGCATTTTACGAATTCCTGCGCAACTTGGAGGACAAACTGAACAGCGTGATAAAAAGCGTGGGAAAAATAGA
GCATCACTTCTGGAGGAGTTTCAATACGGAATTAAAGATCGAACCATGCGAGGGCTTTATAGACGGCGATCTGATCGAAA
GTTTCCTGGACTTGAATCACGACAAAATGGCGGAAGTTGCAATGGGCCTTATGATCGACGACGGCAGCGGCATGAAAAAG
GAAGCGACGGTAGATGATCTAGTAAAAATAGTGGAAGATCTTACAAGGATACATTAAATAATATTTAAGTGAACAATATT
TAAATTTGTGAAATGTCTGTACTAGAAGACGTAAGACGGATTCAGACAGCGATTTAAGCGGGAACGCAAACGTTTATACA
GTCATCTTTACTATCATTGTACGCAGAAACGTAAATGGCGTAAATTATCTTTTTGTCTGTAGATCTTTTTTGTATGCATC
CCTGAGAGTGAATAATTTTGAGGATCTGGTTCGTGTGAGAAAATTCGTTCACTTTCATTTGTCATATGTTACATCGGCGA
GCAGTAATTTTTAGAATCTTGCATATGACGTAGAGATAATTACAGCGTAGAGCGACATTGGCTGGTAAATTATTTTCAAA
GAGTGCTCGGATTTCTAGTACCTTTGTATCTTTGTAAGATTGAGTGTAAATAAAAAGGATTTTAG
PEP:
>LH12346-PA
MSHHYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEGLRPLKEVGIYGKIAVIKFFRPPHEKKDLLFLL
TTRYNAMILECIGEGEDIEIITKAHGNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPELKASSIRMD
EQQVQDVNFLHGCANPTLILIHQDINGRHVKTHEINLRDKEFSKIPWRQDNVEREAMMVIPVPSPICGAIIIGQESIIYH
DGTTYVAVVPPIIKQSTITCYAKVDNQGLRYLLGDMAGHLFMLFLEQEKKPDGTQVVKDLKVELLGEISIPECITYLDNG
VIYVGSRLGDSQLIKLITKADENGSYCAPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIRNGIGIQEHA
SIDLPGIKGMWALKVGGGSFDNTLVLSFVGQTRILTLNGEEVEETEIPGFVADEQTFHTGNVTNDLFIQITPTSARLISH
ERKIVVSEWEPQNKRTISVVACNGTQVLCATGNDLFYMEISCDQIVSKGFVTLQHEVACLDISPLEGVTEAKIVAVGLWT
DISVRILTLPGLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHRQNGVLSDKKKVTLGTQPTVLRTFR
SLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPR
RIAYQESSQTFGVITMRVDVQESSGMSIVRHSASTQAASTSSSSQIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVL
HAHTLMPTEYALSLISTRLGEDPTSYFVVGTAFINPDETEPKMGRILLYHWSDGKFAQVAEKEIKGSCYSLVEFNGKLLA
SINSTVRLFEWTAEKELRLECSHFNNIIALYLKTKGDFVLVGDLMRSLTLLQYKTMEGSFEEIARDYNPNWMTAIEILDD
DTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTLGCVLFGTVSGAIGLVTQ
IPFAFYEFLRNLEDKLNSVIKSVGKIEHHFWRSFNTELKIEPCEGFIDGDLIESFLDLNHDKMAEVAMGLMIDDGSGMKK
EATVDDLVKIVEDLTRIH
Swiss-ProtDNA damage-binding protein 1
KEGG     K10610  DDB1; DNA damage-binding protein 1     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF10433  MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term     

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