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Gene detail [Fasta]

Species Linepithema humile
GeneLH12333
Positionscf7180001004585:375262..388037[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH12333
sequence mRNA:
>LH12333-RA
ATGTTCAGCAAGAAGCTCCATGTAGATGTCAAAAAGTCAACGCTCAAGATCCAGGATGTCAAGAAGGACAGCGCGACGCG
GTTCAAGCATCTCAAAATCGTACTAGAAAACGTGGATACTGATGAGGCAAAGGGCTTTTTCGAGGGCAACTTCAGCCATG
TTTACTTCATCTTGTATGATTGTTTCGTGTCTGCGGAAGCGAATCTTCGACAACGCGAGCTTTCCTTCCATATTGTGCAC
AAGGCGCACAGGGAAGAGTTAGAACAAGTATTGCAGCTCTTGGAGAAAGTTTTAACTCTTCTTCCTGAGCTGCTTAACAG
ACGATGGCAATGTCACAGTCTAGCGCGGATTTTGCAGAAGCTCTTGCATCCTGGTAACAGTTGGAAACTTCGCAGGCAAG
CCATAAGGTACTTTATTTTGTGGTATCAAGCTCTTGGCGAAAATGCTCCCGAACACATACATCAGATGTTCGCCAGCTTG
GTGCCGGGATTTCCACCGCACCAGGTGTCGCCTTACAAATGTGATCGCAGAGCGGAAGGCAAGAAGGAACGACTCGCGAA
GGCAGGCAATTCCGAGGAGAAAGATAAGAGGGAATTTTATGACTCGCAACTTATGCAAAGTACTTTTCATGACAACGGAC
CGAATCAAAGTCCTATCAGTCAAGTTGACGGCGGGCCCATCTTACCACCGCAAAGTGGAGAGAAGCCACTCGACAATGAA
ACTGTTAGGTTCTTGGAAGCGTTGCTGGAATTCATGGTTACTCAGGTGGTGAAAATCGAATGGCGGGACAAATCTACACG
GCAGCACAAAACTTTTCAGTTTTTACTAGAACGCTTTAAAGTAGCATACCTTCGTCACATTTGCCCGGAATTTGACGAGA
ACTTTTCACTTTACAAGCCCAATCTGGAATTACCCACAATGCGCAAACCGACGAATCAAAATCACGACAATTACGTGCTC
TGTAAAGTGGCTTTAATCAAGTGGGTTGCAAACTTCACGCACGTCGCTAAAAAGGATGGACTCTTCGCACATCTCTCGCA
AAGCACAACGCCGAACGAGGAAAACGTCGAATCAGAATTGCGCCGTGTGTCAGTCACTCAGAACCCTAACGACTCGACTC
TGTTGTCGCCCGAATCAGCCATATCGCAGCAAGATAGTCAGATTCAAGAAGACAGCACCGTCTCGGCGCTCATGTTAGTC
AGAGACGTTTTATACGGAAATAGAGACAACGTTAACTTCGTGCACGAATTGTACAGACAGGCGTTCCTCCTGGATTTCAA
CCATGCGGGAGCTATAAGGAAGGCTATCGCTGTTTATAAAGATTGGATTCAAATGAATGAAATCCCTCCGTTTATGCTGG
AACCATTGGACGGTCACAAGGATCGAGATCTAGAAGAATATCAAAAAAGCGAGATGGAAAAGTTTCCTTCTGAGAATTAT
CGACAGACGAGGTTAAGGAATGATTCTTACCTCGGCGCTATACACCGGGAGAATTTATTCATCAGAGCGGGCTTGCAGAA
CGTTCTGCAAGTCTTCATCACGCAAGCGTCGAATGTATTTTTCTTGGAGAACTCGGGGCCGAGCGCGTCTCCAACGTTGC
TTGAGGAACAAACGGACAGCTGCAAGAGAGTGTTGAACGTGTATCGATACGTTGTTATGCACTCCAGATTGGAGCCAGCA
ACTTGGGAACAGCTACTCAGAGTGCTGTTGCAAATTACATCGCTTGTACTGAGCGAGAAGTCCTCCCGCCGCAAGCAGCA
GGACACCATCGGTGGCAAACTCGCGCCTGCCATATTTCAGACTCTAATTGTTACGTGGATTAAAGCCAACTTAAACGTCG
TTATTTCCACCCAATTATGGGACCAGTTTCTAGAAGTGTTGACGTCGTTAACGCAATGGGAAGAATTAATTCGAGAGTGG
GCGAAAACTCTGGACACGCTAACGAGAGTATTGGCGAGGCATGTGTACAACTTGGATTTAAACGATCTACCCTTGGACAG
ACTTAGCGAACAGAAATCAAAGAAGCGCCGCGGCGTCGGAAGTCGCGCGGCGTCGACCGGAAGCGTGCAACCGCCGCGGA
AAGGTAGCGAAGAGAATAACACCGCGCCGAAAGAGAGCGTCACAGATCATCCGCTGCGCGATATAAGGAAAGTGCGGCCG
CTACCGCGCAGCGCGAGCGACAACAACATATACAGTAGCAAAGCTCGCACGAAGATACCTCGACAGCGAACGCACACGAT
ACACAGCGGCATTCCTGAACAAGATATGGCACGGTTACTGTCGAGTGGCTCGACTTCGTCGTCGGCGGCCGGTCGGAAGA
TGCTGCCCAGCAGACGTGCGAAATCGTTGGATAGCATTGTTATAGTCGATAGCGAGCCACCGTCGCCGCGATGCCCGTCG
CCGACACCCAGCAGTGGCGTTGACAGCAACAAGGATAGCCCGATACAGATAGAGAATATTGATGGTAGCAGCATTGATAC
AAACGACGCGTCTGAAAGAAGATCAGTTATGGCAGGTGGAGGGGTTCGTGGATGGTTGCCAGATGTGGCTGTCGTTTTAT
GGCGGCGTATGCTGTCGGCCTTAGGAGATGTCAATAACATCCACGATCCTGTTTTGCACGGCCAAGTCATGGATTACTTC
GTGCAGCTCACACAAACGTTGATCAAGATTCGCTTAAATCAAGGAGTATCCGGGGATAATCAGGCGACGCCTCCGGCACC
GGAGTTAATTCCACCTCTAACAGTCATCGCACCGTGGTGTTTTAAGGCGATTCAACTTCCGGAGCAATACGAAATCGGCA
AACTAGCCGCGTATCGTCTCATATGTCTCTTGACGATACAACCGCTGGACATCAGTCTGCCGAAACAGCATCTGACGCTT
TTCTATCGCGCCGTTCATAGCGGGATCGCCAGCAACGACAGCAAAGTTCTGCACGTGCTTGTGAAATACACAGGACCCAG
ATTGTTCAGCCTGAATCTGCCGGGATCGAGCCTTCTGATTCTGGACTACATTCACGCCGCTAACGTGATACTCAGCAGTC
AGGATGTCGAGGCACCCAGGACAGAGGCTGTTTCTATCATCGGCTCATTGTTGTCGATGCCTATCGGAACGATCAAACTG
CCGCTGCTACAACCGAACGGGCCCGACATCGTAACTATGACATGTCCGGAAGCAAAGGAGCATATCGTAACGATACTTTT
GCGGAGCTGCCGACGAGAACCAACCGGGATAGCGAGATGCGTGGCCCTATCGAGCATCGCGATGTTCGCGTACAAAGAAC
TGTCTTACAAAACGCAACATCCGAGAGTTCCCGAAGCTGTCACCGTTCTTCTTCTCGCACTTAGGGCCTCGCACGCCACG
GTTGCACAGGTTGCGTGCGATTCTCTGTTACTTCTCTGCGATAAGGCCGACGTGCTGCTAGAACTGTATCCCAGTGTGCC
ATCTAAGATAATACAAATTTTGTCGGATACACTTGGGCGAATGACAACGCGGGAAAGACGCGGGCCTTTGACAGTGTCGA
TGCTGTTCTGCTTGGGCGAGTGGGCTATGCATTTAGGACCAGCGGTATTACTGCAGGTGTTCCACGGGAAGCCGCTCTTG
ATGACCTTATTTACAGTGTTGAACAATATAGTGCAGAACAAAGTGGGGAAGGAATTTTCAAGAACCGCTAAGAATCATGA
AGAGGACGACGATTTTGATCTGAACATTATGCTGGATAATCTGGTCGACGAGCCTTCCTCAAAATCACCGCACAAAGGAA
ACATTCAGTCCGTGCAGTTGGCAGCAAAAATGGTGATGATGCATTTAATCAACCACCTCGGACACTTTCCGATGGGAATC
GGTGCCGCGCGTCTCTCATCGCTGGTCGTCGAGCTGGACGACGTTCCCGGAATCGACGGGGACGAGTTGTCCTCCGCCGT
TTTCCAAGCGCCTAACATACAGCTGTTGATGCTCTCTAACTCGATCATAATGTCGCTGGTGGAGTTGGCGGCACTGGACG
CGCCTGGCGGAGGAGTCACGGCCGGCTTGACCACGGCTCCTTCCTTGGTCAGAGTTTTGCTGCGAGATCTCGCTGGCAAA
GCCTCTTGGGACAGTTCGATCTTATATAGCCAACCCTTTGTCGACGACGATCTACCGCTGCCATTTGCGAAACCTGTCGA
CTGGAGTGCGAAGCTGCATGTAGATGACTTAAATAGCGTTATCACGCCTCACAACTGTACACCCAGACACACGATACGGC
ATCGCGAGCCTCACATATTGCCGACTTTCGCAAACGCCGCGAGCGATATGGACAATTTGGATGACGATCCCCTTAAGCGT
GATCTGATGATGAGATTAGCGCTAGAGAATCCTCGACACACCAGTCCGGAAGTTTTGACTAACCCGGAAGTCGCTCTCAA
CGCGCCTGCTAACCCACCTCAGGGACACTATCTCGAAAGCGAGACGATTGCGACGATTTTGAATCAAAGGAACGTGGAGC
AGGAGCACATCAACAACTGGAGTCAGCACATCAGCATGAGCGCATCGGCAATCAGCCCGCCGTCGTGTCGCCCGCCGCCG
GCGCCGTTTCACCACTGCCGCCTTCTGTTTTCGCATCTCGGCCTGTCCGGCTGGGAGCAACGGAGGAAACTGCATTTGCT
GGCGAAAAACGAGAAGCTCTTGCGCGAGCTGCGCAATCTTGACAGCCAGCGATCCAGAGAGACACACAAGATAGCGGTGA
TTTACGTCAGCCAGGGCCAGGAAGACAAAAACTCCATACTAAGCAACGTCACTGCCAGTAAGGAGTACGAGAGCTTCATC
GCGCGACTCGCCTGGGAGGTCGAGCTCGAGTCGCACACCGGCTTCCTCGGCGGCTTAGTGCCCGGCAAGGCGTCCGGCGT
CACCGCACCGTACTACGCCACGTCCTTCACCGAAGTTCTCTTTCACGTTGCCACGAGAATGCCATCGGACAGCCCTGAGA
GTTTACTGCAAAAGACGCGGCATCTCGGCAACGACGAGATCCACATAGTCTGGTCGGAGCACTGGCGGGATTATCGCAGG
GACATCATACCAACGGAATTCTGCGACGTTCTGATAGTCATTTATCCGCTGAAAAACAAGCTGTATCGAGTACAGATTTC
GCGGAAGTCGGAGATTCCATTCTTCGGGCCGCTGTTTGACGAGTGTATCGTGGAGGACAAGGTGTTGCCGGGTTTGGTGA
GAACGACTGCGCTGGCCGCGAGCAGGGCGAAAAGGTCTACGCTTACATTGTACCAACATTATTACGAAGAGAGAGCGCGA
TCCATCGATACTGTCATGAGAAATCACAAGGAAGCCACGACGTTCGAGGAGTTCACGGCCAACGTTTACTCGCCGGTACA
ACCGCCGAGCCCGTTCAGCGGAGCTTCGTCCGTCTCTGGATCTACAACAAGCGTGCAATCCACAGCGTCGTCAAACCTCG
CGGCAGCGCTTATAGATTCGCATCAGGGGCGTTCCGGTCTGCGCAGCACCTCGGCGGCGAGCAGTGACAATCGTGCGAAT
AGAGTTTCTGACGGAAGCAGAGTGTGGTTTAGCAATGATATCCCCGACAGCACAACGCTTCACGGAATTTCACCGAGACC
CGTGAAAAAGATGTCCTTTAAAACCGGACCAAAGCAGAGAGCTAACACACAATCTACTCCTCCAGATAGTCCGAGATACA
AGTAG
PEP:
>LH12333-PA
MFSKKLHVDVKKSTLKIQDVKKDSATRFKHLKIVLENVDTDEAKGFFEGNFSHVYFILYDCFVSAEANLRQRELSFHIVH
KAHREELEQVLQLLEKVLTLLPELLNRRWQCHSLARILQKLLHPGNSWKLRRQAIRYFILWYQALGENAPEHIHQMFASL
VPGFPPHQVSPYKCDRRAEGKKERLAKAGNSEEKDKREFYDSQLMQSTFHDNGPNQSPISQVDGGPILPPQSGEKPLDNE
TVRFLEALLEFMVTQVVKIEWRDKSTRQHKTFQFLLERFKVAYLRHICPEFDENFSLYKPNLELPTMRKPTNQNHDNYVL
CKVALIKWVANFTHVAKKDGLFAHLSQSTTPNEENVESELRRVSVTQNPNDSTLLSPESAISQQDSQIQEDSTVSALMLV
RDVLYGNRDNVNFVHELYRQAFLLDFNHAGAIRKAIAVYKDWIQMNEIPPFMLEPLDGHKDRDLEEYQKSEMEKFPSENY
RQTRLRNDSYLGAIHRENLFIRAGLQNVLQVFITQASNVFFLENSGPSASPTLLEEQTDSCKRVLNVYRYVVMHSRLEPA
TWEQLLRVLLQITSLVLSEKSSRRKQQDTIGGKLAPAIFQTLIVTWIKANLNVVISTQLWDQFLEVLTSLTQWEELIREW
AKTLDTLTRVLARHVYNLDLNDLPLDRLSEQKSKKRRGVGSRAASTGSVQPPRKGSEENNTAPKESVTDHPLRDIRKVRP
LPRSASDNNIYSSKARTKIPRQRTHTIHSGIPEQDMARLLSSGSTSSSAAGRKMLPSRRAKSLDSIVIVDSEPPSPRCPS
PTPSSGVDSNKDSPIQIENIDGSSIDTNDASERRSVMAGGGVRGWLPDVAVVLWRRMLSALGDVNNIHDPVLHGQVMDYF
VQLTQTLIKIRLNQGVSGDNQATPPAPELIPPLTVIAPWCFKAIQLPEQYEIGKLAAYRLICLLTIQPLDISLPKQHLTL
FYRAVHSGIASNDSKVLHVLVKYTGPRLFSLNLPGSSLLILDYIHAANVILSSQDVEAPRTEAVSIIGSLLSMPIGTIKL
PLLQPNGPDIVTMTCPEAKEHIVTILLRSCRREPTGIARCVALSSIAMFAYKELSYKTQHPRVPEAVTVLLLALRASHAT
VAQVACDSLLLLCDKADVLLELYPSVPSKIIQILSDTLGRMTTRERRGPLTVSMLFCLGEWAMHLGPAVLLQVFHGKPLL
MTLFTVLNNIVQNKVGKEFSRTAKNHEEDDDFDLNIMLDNLVDEPSSKSPHKGNIQSVQLAAKMVMMHLINHLGHFPMGI
GAARLSSLVVELDDVPGIDGDELSSAVFQAPNIQLLMLSNSIIMSLVELAALDAPGGGVTAGLTTAPSLVRVLLRDLAGK
ASWDSSILYSQPFVDDDLPLPFAKPVDWSAKLHVDDLNSVITPHNCTPRHTIRHREPHILPTFANAASDMDNLDDDPLKR
DLMMRLALENPRHTSPEVLTNPEVALNAPANPPQGHYLESETIATILNQRNVEQEHINNWSQHISMSASAISPPSCRPPP
APFHHCRLLFSHLGLSGWEQRRKLHLLAKNEKLLRELRNLDSQRSRETHKIAVIYVSQGQEDKNSILSNVTASKEYESFI
ARLAWEVELESHTGFLGGLVPGKASGVTAPYYATSFTEVLFHVATRMPSDSPESLLQKTRHLGNDEIHIVWSEHWRDYRR
DIIPTEFCDVLIVIYPLKNKLYRVQISRKSEIPFFGPLFDECIVEDKVLPGLVRTTALAASRAKRSTLTLYQHYYEERAR
SIDTVMRNHKEATTFEEFTANVYSPVQPPSPFSGASSVSGSTTSVQSTASSNLAAALIDSHQGRSGLRSTSAASSDNRAN
RVSDGSRVWFSNDIPDSTTLHGISPRPVKKMSFKTGPKQRANTQSTPPDSPRYK
Swiss-ProtRal GTPase-activating protein subunit alpha-2
SUPERFAMILYSSF111347  Rap/Ran-GAP superfamily     
PfamPF02145  Rap_GAP; Rap/ran-GAP     
ProSiteProfilesPS50085  RAPGAP; Rap GTPase activating proteins domain profile.     
CoilsCoil

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