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Gene detail [Fasta]

Species Linepithema humile
GeneLH16615
Positionscf7180001004919:270981..275354[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16615
sequence mRNA:
>LH16615-RA
ATGCCGCCGGTGTTACAGTTAACTTTTGATACCTTCACGGTCGGCCGCTTTCAATCCTTTACGTCGGAAGGATGTCCAGA
TGGTTTCATGACTATTCGCGAGGAAGGTCGCCCTGCGACGGGAGGACAATGGTGTGGCAGCGCGTGGGGCTACACCGTTT
ATTACAGCGAAACTCCTTCCATCAATCTGACTTTATATTTGCTACGTTTATCAGAGCAGGGTATCGGCTACAACTTCGAC
TTCAAGCTGTCGTACAAGTTCTTGAGAAGAAGCGAGGCGCATCTCAGATACGGGAACAGCAGTATGTCCACATGGCGCGG
CGAGCTCGTGAACGGCACGTATTGCGATCGCGTCCTCACCAAATGCGATACTAGAGCTTGTCGACTACAGTCGCCGAATT
ATCCCGGAGTTTACCCCAGGAATGTCACTTGTTACTATCGGGTGGAGCAAAACCGCGCGCCGGTGGGTCATCGCGCCCTA
CTTGCCGTTAGTCAACGGAACAGTCACAAGATACACATTAAGGACCAGGTCGTGAAGTACGACAGGAGTCAGCGCGTGCT
GAGGGTGTGGGATCAGTGCAACGTCGTGCAAGATTACTTGACGGTATATGACGGTGGTTCAACCTCAGACCGAGTGCTCG
TAAGACTGTGCGGAGGAGATGCGGTACCAGACATCGTCAGCAGCCACAATACGATGCTGCTGGAGTTTCATACATCCCCG
TACGACAATCCGTTTCATCCGGTTCCACTATCCTTTTTGCCAGGATTTGAGCTCGAAGTTCAGGTGATCTTCGTCGACGA
AAAATCTCGGAGTTTTGTGAAAGAGAACGAAAATTGCGATTTTTATATATCCGGTGATGAGAATTCATCGGGGATTCTGG
AAAACCCAAAGCATTCTTTACCACCGAACACCACCTGCCGCTATCATTTTCAAGGGAAGCTCAACGAAATTGTTTGGTTA
TCGTTCGTCAAATATTACGCCGCTAGCGTGGAAGCTGCTGCGAGCATCGACACTACTGCTGATTGCAATGCAAAACTTTT
GATATGGGACGGTGATATCACGGTAGACAAACTCACCGCCAGCCGAAAGAACATTACACTGATGGGACAGTTCTGTAAGG
ACGACATACCGCGGCTATGCGATCACAGTCTGCTACGTAACAGCAGCCGTCATACGCGGCCGTGCAGCCTCGCGGAGAGT
TACGTGTCAACCGGCCGCGATCTCACTCTGGAGCACATATTGCGTCAGGGTAGCGCGCTCTACCCGATAAGCTTCGTCCT
GCGTTACGAGTTCGTGCACGAAGCCGTCTCGTGTAACCACGTGTTCGTCTCGGCATCGTCGATTTCGCCCACGTCTTCCA
CGTCGTCCTTATCGTCCTCCCCCTTGTCGTCCAATGCCGGCAAGTTTGCGTCGCCGAAGAGCGTGTTCTTCTACGGTCGC
GGCGGCGCGCAGAATCTGAGCTGCGTGTACAGATTCGAGGCCGAGCCCGATCACAGGATAGAGCTGTCTTTCGTTAAAGC
CTCCTTCGGCGGTAAAAACTGCGCGTCTTACGTGGACCCATTGGTGAACCGATGGACGTGCGACCGGCGCATGGCGGACA
TCAAAAAGTTTGGCATGGCTGATCTTGTTATCGCTGAATATCCTTGGCAAGGAGTCGAACTCGTTCGTGATTGTCTATGC
TCGAATATGAGCGAGAAGCTCATCGTGCGGACGCTGACGTCAAACGTTGTGGAGGTCAGATTCACCGTCACGCTCATGAA
CGTCACCCAGGATTACCGGGACTTCTTTTTCGAGGGGGAATACCGCTTCGTTCCCGTGGGCGCGGATTCGAGCGAGCACG
GGTGCTCGACGAAGCTCGAAGAGCGACGATTGCGCGGTACCAGCGGCGAGATATCCCTCAGAAGTCCTCTGCCGCGGGTG
ATCTCCAGCTTGGCCGCGGTGGAGGAAATCCTGACGAATATGGAGGATTTCACGGCGACGCAGTGTGTGAACGAGCCGTG
GCTGATCGAGCCCGAGGACGCGCGCATCAATTTTCTATACTTGAGAACCGCCGGTTATAGCATCACTCTCGACAATGTCG
AAGAGTGCACAACTTTGAACAGAATCGTCGTCTATTCGGCCGCGAACACGAAAGAGCGCAGCGTGATCTGTCCGGAGGGT
GGCGTCGACACGACCAGGACCGTCGATTTCTTCTCCGGTGGTTGGAATTACAGCGCGGTGAACGCGAGCGTGGCGATGGC
GCAGCACGCACGCAGTTTCGTCGTCGAGTTCCTCCAGAGAGAACCCGGCTTCTACGCCGTCACGTGGATCGCAATCTCCA
AGCGGCGTCCAGACGCGCCCACCACGTCGAATGCGGGCGCTAACACATTTGCGATATTACCCGTGGATGATTGCCCGTAC
AAATGTCCAGAGATCCAGGCATGCATCAGTTCAGTTCTATGGTGCGACGGCGTGCGTCACTGTCCCTCGGGCTTCGACGA
GGAGGAAGCCAATTGCTCGTATCGTTTCGGAGTGACTCTGCTTTACGTGGCGGTGGGCGCCGGTGCCCTGGGCATATTTC
TGATCCTGCTGCTGGCCACCGGTTGCCTAAAGTACTGCTTGTACCGGCACAAAGCGCGCAAAAAGAAGAAGAACGTCGCC
CTGAACGTCAATCATCTCCACGTGAATCATACCCATCACAACAACGGCTTGACCGGAAGCCGACTGAGCGGCCGCTACAA
CCTAGCCACGCCCCAGGAGATGTACCTGGAGAATTACGGGAAGGACAGTATTTGTTGA
PEP:
>LH16615-PA
MPPVLQLTFDTFTVGRFQSFTSEGCPDGFMTIREEGRPATGGQWCGSAWGYTVYYSETPSINLTLYLLRLSEQGIGYNFD
FKLSYKFLRRSEAHLRYGNSSMSTWRGELVNGTYCDRVLTKCDTRACRLQSPNYPGVYPRNVTCYYRVEQNRAPVGHRAL
LAVSQRNSHKIHIKDQVVKYDRSQRVLRVWDQCNVVQDYLTVYDGGSTSDRVLVRLCGGDAVPDIVSSHNTMLLEFHTSP
YDNPFHPVPLSFLPGFELEVQVIFVDEKSRSFVKENENCDFYISGDENSSGILENPKHSLPPNTTCRYHFQGKLNEIVWL
SFVKYYAASVEAAASIDTTADCNAKLLIWDGDITVDKLTASRKNITLMGQFCKDDIPRLCDHSLLRNSSRHTRPCSLAES
YVSTGRDLTLEHILRQGSALYPISFVLRYEFVHEAVSCNHVFVSASSISPTSSTSSLSSSPLSSNAGKFASPKSVFFYGR
GGAQNLSCVYRFEAEPDHRIELSFVKASFGGKNCASYVDPLVNRWTCDRRMADIKKFGMADLVIAEYPWQGVELVRDCLC
SNMSEKLIVRTLTSNVVEVRFTVTLMNVTQDYRDFFFEGEYRFVPVGADSSEHGCSTKLEERRLRGTSGEISLRSPLPRV
ISSLAAVEEILTNMEDFTATQCVNEPWLIEPEDARINFLYLRTAGYSITLDNVEECTTLNRIVVYSAANTKERSVICPEG
GVDTTRTVDFFSGGWNYSAVNASVAMAQHARSFVVEFLQREPGFYAVTWIAISKRRPDAPTTSNAGANTFAILPVDDCPY
KCPEIQACISSVLWCDGVRHCPSGFDEEEANCSYRFGVTLLYVAVGAGALGIFLILLLATGCLKYCLYRHKARKKKKNVA
LNVNHLHVNHTHHNNGLTGSRLSGRYNLATPQEMYLENYGKDSIC
Swiss-ProtCubilin
SUPERFAMILYSSF49854  Spermadhesin, CUB domain superfamily     
Gene3DG3DSA:4.10.400.10     
PfamPF00431  CUB; CUB domain     
SMARTSM00192     
ProSiteProfilesPS01180  CUB; CUB domain profile.     
OrthologiGroup-00042    Tolloid-like protein     

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