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Gene detail [Fasta]

Species Linepithema humile
GeneLH16594
Positionscf7180001004919:31155..42589[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH16594
sequence mRNA:
>LH16594-RA
ATGACGATTGCCACTAGGGGCCAGGGAGTTGGCATAGACCCTCCCGACAGCCAGCAAAGTACACAGATGCACAGTCCACC
AGGTCCGCAACAACTGGCTGACACAATGTCGGGACTTCAACTCACTGAGAATGTGGTACAAACTGAATGCAACAGTGATG
CTATCACTACGGTAGAAGATAGCAATCAGCTTCATGGAGAACCTGATTTTCCTATTTCCAAACTTAATATGCTTCATGAA
AAGATATCTAGTCCACGATGGGTTGTACCAGTTCTACCCGAACAAGAATTAGAGTGCCTGTTACAAGCCAGTATCGAGCT
TTGTAAAAAAGGAATTGATGTACAAAGCGAAGCGTGTCAACGCTTTTTTCGAGAAGGTCTCACAATCTCATTTACCAAGA
TATTAACAGACGATGCAGTAAACAGTTGGAAATTAAATATTCACAATTGTATTAATGCTAACTGTGCACGTTTGGTGGAA
TTATGTGTCCTGAAATTAGACGAGGATTGGTTTCCTCTTCTTGATTTGCTGGCCATGGTTTTTAATCCTAGTAATAAATT
TCACACATTTAACGCAGTAAGAGTCTCGGAAACTGTTCCTCTTGGTAGTGATATTCCTGATGAGGAACTTTACGCTCGCC
CACCGCCTGATTCACGAAGTCCTCGTGGTTGGCTAGTAGATCTTATAAACAGATTTGGGAGTCTTAATGGATTCGAGATT
TTGCTCTCTAGATTTCAGAGTGGACGTAATTTAACAGTGCCAGTTATTTATGCTTTAATCAGACCTTTCGGCTTGTGCTA
TGAATTATTAACTGTTCACACAATAGTTAAATATCTGATGCCTATTGTTGAAATGGTACCTCTTATTTTGAATAACTTAA
CGGACGATGAGTTGAAGAAAGAGGCAAAAAACGAATCAAAAAACGATGCAATATCAGCCATAATCAAAGCTGCTAAATGC
TTGGTGTCGCGCGTACCTCATCAGGAAGAGATGATAAAGAACTTGGAAATACTGAGACTGAAAATGATATTGAGACTCTT
ACAAATTTCTTCGTTCAATGGGAAGATGAATGCTTTAAATGAAGTTAATAAAGTAATATCTAGTGTTAGTTATCACCAAC
ACCGTAATACAATAGTAGAGGAAGAGGAGTGGCTTACAGCGGAGCGTATGGCGAAATGGATTAAGGACAATGGGGTGCTG
GAAATTGTACTGAGAGATTCCTTGCATCAACCGCAATATGTAGAGAAGCTGGAGAAGATTTTACGCTTTATTATAAAAGA
ACGTGCACTTACATTAGAGGACTTAGATGCTGTCTGGGCGGCGCAGGCTGGTAAACACGAAGCAATTGTGAAGAACGTTC
ACGACCTGTTAGCCAAATTAGCTTGGGATTTTAGTCCGGAACAACTTGATCATCTATTCGAATGTTTTCAGACAAGTTGG
AGGACTGCCAATAAGAAACAACGGGAGAAGTTATTAGAATTGATTAGGAGACTCGCAGAAGATGATAAAGACGGCGTTAT
GGCACATAAGGTATTGACACTTTTCTGGACTTTGGCTCATTCGGATGAAGTCCCTACGGAAATTATGGATCAGGCGTTAA
ATGCTCATGTGAAAATTCTTGATTACTCGTGCTCACAAGAAAGAGATGCGCAAAAGACAATCTGGCTGGATAAGTGCGTT
GAAGAGTTGAAGAATGGTGATAAGTGGGCTCTTCCTGCGTTGAAGCAAATTCGTGAAATATGTTGCCTTTATGAACCAAA
TCCCAACTTAAGTCATAGTCAGCGTAGCCATCATTTGCATTACAGGCAAGAAGTAATAGAACGTCTACAAAGCGAACACT
CAGTAGTAATACTTGTAACAAATAGTTTAACAAATTATATGGATAAAGTGCGGCAATTGGTGAAAGAAAACCCTGAAATT
GATGCAAATACTTTTATGCCTGACGGTCGATACAATCATATTATACAGGTTCAAGAAAGATTGAACTTCCTGCGTTTCTT
ACTGAAGGATGGACAATTATGGTTGTGCGCCGAACAAGCACAGCAAATTTGGCAATGTTTAGCTGAGCAAGGTGTGTTTG
TTTCGGATCGCGAGGCGTGCTTCAAGTGGTTCTCCAAACTCATGGGAGACGAACCAGATCTGGATCCAGCAATAAACAAA
GATTTCTTTCAAAACAATATATTACAACTAGATCCGACATTGCTTACGGAAAGCGGTATTAAGTGTTACGAAAGATTTTT
TAAAGCTGTTAATTCTAAGGAAGGAAAATTGAAGCTGAAACGCAGAACCTTTCTCATGGATGACGTGGATTTAATTGGCA
CTGATTATTTGTGGAGAGTGGTGACAAACAGCCCGGAGGAAATTGCAAACAGAGGCATAGAGCTCTTGAAGGAGGTGAAC
ACCAATTTAGGACCGCGACTGCAATCATCCGTTTTGGCATTTCACGAAACGTATATAGCGGAATGTATGGACAGACTGAA
AGCTCATTATGACACCGTGACCGTCTTGAGCAGAGTGTACTTGGACGGGAAGGAGGAGCGCGAAGAACAAATGACAAATA
AGATTAAAATGGAAGCTATAAAAATGTGCCGCGTTATGAAAGTTTTACAGGAATATATAAACGAGTGCGATACAGCTTTT
CCAGGAGAACGGAAAATATTACCGCTACATAGAGCGGCTCGTGGCAAACACCTATCACTCGTCATTCGTTTCGCGAGTCC
TGGTCGAAATGTTGACGACATAGATATCTTCACTCATAGCAACGACACATTAGCTTCACTGAGACGTCAAATATTACGCA
GGATTAAAGCGAGCGGGACAAATGTAAAACTGGATTTATTTATTAATGGAGAATCGTTAGAACAGGCTGACGATAGAAAG
CTTCTTTCTCAGATTCCACTGAGAGACAAAATGTTGTTATCTGCAAAGCTCAGTCAAGTAAATAGCAATATGCCAAGCTC
ACCGGACAGCAGTTCTGATAGCTCTACTAGTTCTCCACATCATCCGTATGATGGGCCGAATGTAGAAGCAGAAAACAGTT
TGCCCGGCGTGGTGATGTCGCAGAGATCGCAGTATGCGACATTTTTCTTTCAATTGGCAGATCTCGGCTGCACCCTTCAA
CACTCACAATTGCGTGACGGTGCACGAAATCTTCTGCAATTGGTGCCGCCAGATATTCTCACTGTAACAAGACTACAGTG
GTTATTTGGCCACTACAAAGACGATGAAACTTTACAGAACCCCTCTCAATATCACTGTAACGAGCAAAATACGACAGTAG
ATTCTCTATTTTTTACTGCAAGTCCTAGCCAAGTTTTATACAATTTAGAGGTGTTATACACTTTGTTAATGCCTGCTCTC
GATCCTATGTCCGAGAGAGCATTTGAATTTCAATATAATTTCATAAAAAGTGGCGAAGCGGGCGTTATTCTCGACATGTT
AACCAAAAACAAGTTTCTACCAAATGCGGACGAAACTACGAAGCGGTCTGCGTATCTCACAGTGCTGAGACTGTGCAAGT
TACTGCTGACAGTGATGGGTAACGTGATGGCATGCGTGCTGGACGAGGTACAGCAGACTGGCACTCCGGAGAATCACGAC
AACCACGTCAACAACCGTGGTCGTATCGCGGTGCTGAAGCAAGCTCTCCAAAGTGTGCCGAATCAGAGCACCGAGTACAT
GCTGAGAAACGTGGCGGCTAAACTGGCGCAGCATCTCGCGCACCGAATGATCTCCGGCGGGCCAGAGGCCGACCGATGTC
GGCAGCTTTTCGTCCAGGCCCTATCGTGGGAATTACCGGATGTGGCTACTATACGTGCCATAATTAGACTAGCATGGGCC
GCATCCACCGGTAACTTGAGCAACATTAACGCGTCGAACGAGGCCCTTCACTCGATACACGAGGCGAACCAGAAGGAGCA
GAGAAACCCCGATAATAACGACGTTCTCGTGTGCAAAGAGGCACTCGAAGTGCTAACGATCGCCCTCGTGCTGAACCCGT
CAGCGTTGGAAACATTGTCGAGGGACAAGATATGGCACACTTTCTTGATAGACCTCGTCCTACTCAGCACATCGAGGGCC
ATCAGAATCGCCGCTGGCGAGCAATTTTTTCTCATGTCAACATGGTGCAGTGGCGGACACCAAACGCTGTCGGTCACCAT
CACCCTCCTCTTCACCGTGCTGAACACCACCGTGATGGAAAACGCGAAGCAGAGCCACGAATACTTTCAGCTTCTGTGCC
GGCTGCTGAACTTTGCCCATATATCGAATTGCCCCCTGACGACCGCGGAGACGCTGTTAAACGTGGAAATTGCCTGGCTG
AAGAAGGTCCGGGACAACGTGAAGGAGACCGGGGAGAGTCAGGTGGACGAAGCCTTGCTCGAGGGCCACCTCGGTCTGAC
GAAGGAGCTGCTCGCCTTCCTGCCGCCGAATCAGAAGTACGAAATCGGCTCCGACGAGAAGCACGGTGTCAACTTGATCA
AGGAGCTTGTCGAGGACTTCGTGTTCCCCGCGTCCCGCCTCATGCTGCAGCTTCGCAGCACCGGCGAACTGAGCGCCTCG
CAAGCGTGTCCAGTCTGCACCACTCCTCAATCAACTAGCGCCGCCTTCGATTTACTCGTAGGTCTCTGCGTAGGCTGTGT
ACCCAACATGAAACTTCTAGTCACAATGCTCACCGATATGTTCTACTCCGAGAAAGACGAGCCATTAGTAGAGTGGGACT
ACCTACCGCCTGTGGGGCTCAGACCGCTTAAAGGCTTCGTAGGCTTGAAGAATGCAGGCGCGACCTGCTACATGAATTCA
GTATTACAGCAGTTGTACATGGTGGAGAGCATTAGAGTCGGTCTTCTGGCGGCGGAAGGCGCGGCGACTGACTTGAACGA
GGATTTCTCGGGTGAGGAGAGGATCGAGGGGGAGCAGACGATCGAAACCAACGATAACGACACGAACGAGGAAAAGTGCG
GCGCCGATGAGTCCAGGAAGGAGTACAATATCGGTATTCTAAAGCAAGTGCAAGCAATATTCGGTCATCTCGCCTACAGC
AAGTTACAATATTACATACCCAGAGGATTGTGGAAGCATTTCAAGCTTCAAGGAGAACCTGTAAATCTTAGGGAACAACA
AGACGCGGTGGAATTCTTCATGAGCTTGGTTGAGAGCCTGGACGAGGCGTTGAAAGCCTTGGGCCACGAGCAGATAATGG
GCAAGATTCTTGGTGGCTCGTATAGCGACCAAAAAATCTGCAAAGGTTGCCCTCATAGATATTCCAAAGAGGAGCCGTTC
AGCGTGATAAGCGTGGACATACGAAATCACAGTAATTTGTTGGACTCACTTGAGCAATATGTAAAGGGTGAATTGCTGGA
AGGCGCAGACGCCTACCATTGTGACAAGTGCAACAAAAAAGTCGTAACAGTAAAGAGGTTGTGCGTAAAAAAGCTGCCAC
CCATTTTAGCGATTCAGTTGAAAAGGTTTGAGTACGATTTTGAACGTGTGTGTGCTATAAAATTCAATGATTATTTCGAG
TTCCCACGAGATTTGGACATGGAACCTTACACCGTTTCCGGCTTGGCCAAACTAGAGGGAGAAGTCATAGATTGCGATTA
TGAAGAAGCTGTGAAAGGAACGTGCACCAAATATCAATTAACTGGTATAGTGGTTCACAGCGGCCAGGCTAGCGGCGGAC
ATTACTACTCCTACATCCTGCACAGGTTAAACGATGGTACTGCTAAGTGGTACAAATTTGACGACGGCGACGTAACAGAA
TGTAAAATGGAAGAAGAAGAGGAAATGAAATCTCAGTGCTTCGGCGGTGATTATTTAGGCGAGGTATTCGATCATATGCT
CAAGCGGATGAGTTACCGCAAACAGAAGCGGTGGTGGAATGCGTACATGTTATTTTATACGAGATTAGATGTAGAAGAAA
ATTCCCTAATGAAAAGTGTAAATGAATTGTCATTGTATACGAAATTAGGAGTTATGAAAATGCCACCAGCGATAGAATAC
AGCGTGCGAAAGCAAAACATAAAATTTATGCACAACCGAAATCAATTTAGCGCTGAATACTTCCAGTTCATCAAGAAATT
GGTGTCCTGCAATCCGCATAACATCAACAGACAAAATCTGAATGAGAAACTTAGTCCCGAAGCGGAAGAACTTGCGATGC
TGTCGCTTCAGTTAGTGTCGAGATTTCTCTTCTACACAGGTTTCCATACCAAGAAAACATTACGTGGCACTGCGACGGAC
TGGTACGACATAGTGTGCCATCACTTGCGTAGCAGCAAAGTAGTGCGTTCTTGGTTCGCAAATGAAGTGTTGTTCAATCA
TCCACACAGATTTTGCGAGTATCTTTTGAGCTGTCCCAGTACAGAAGTACGTACTGCGTTCCTTAAAATTTTGGTATTCC
TTGCACACGTTTCCTTGCAAGATGGTCCCTGCGCTCCGCCCAGCCTGAATGCACCAACTATACTTTTGGATCCAGTAGCG
ACGCTCAGTGATCACTTGTTACACGCGGTATTGTCGCTGCTGCACCGCGAAATTTCGGATCACGGACGTCATCTTCCTCA
TTACTTTTCCCTCTTTCACGCATACGCTTCACTGGGTCTTGCTGAAAAGGCGCAGTTGCTTAAGCTAAATGTACCCGTTA
CGTTCATGTTGGTCGCCATCGACGAAGGTCCAGGCCCTACCATAAAATATCAATATCCCGAATTGACTAAATTGCACCAG
GTAGTTAGCATGTTGATACGATGCTGCGACGTGTCGTCAAGGGCACATTCGAGCCACACGCAGCCCCGTGCGGAACCCTT
GCCGAATCCGTACGGAGATCCTGCCTGCCAGTCGGAGTATATCATGCCCATCCCGTCGCAAGCAGCTGATATACTGTTTA
TTCGCACTAGTTATATTAAAAAACTGATCGAGGACGCTAATGTGACTGAGGATACAGTTAAATTACTGCAATACTGCTGT
TGGGAGAATCCACATTTATCACGAACTGTGCTTAGTGAATTGTTATGGCAAATTGGATTCGCTTATACACATGAATTGAG
GCATCATACAGATTTGCTGCTTGCGATCTTATTAATGGAGGATTCGTGGCAGACGCACCGTGTGCACAACGCACTCAGGG
GAGTTCCAGACGAACGAGAAGGTTTATTCGAAACAATACAAAGGAGTAAGAATCATTATCAAAAGAGGGCTTATCAGTGT
ATCAAATGTATGGTGCAGCTCTTTAGCAAGTGCAAACCTGCGCATCAGCTTTTATATCACAGTCCAGAATTGAAAAGAAA
ATGGAGTCACGCAATAGATTGGCTCCACGACGAACTTGACAAAAGACCCTATGCATCCACGGCGCCTTATACACACGCAT
ATAACAATTGGTCTCCGCCGGCACAGTCTAATGATTCTGCGAACGGATATGTCTTGGAGCGCAGCAACAGCGCGAGAAAG
ACATTGGAGCGGGCATGCGAACTATGTCCGGACGAAGAGCCAGAAGTCGAAGATACGAGTGAAGATTGCGCGGAAGAAGC
AGAGAAATATCAGCATTCATCCAAGTATCAGTCGTCCAATACATCCAAATATCAATCTTCATTCCGGACTAAAAGGCGCA
ATAACAGAGGCACATTAGGGTGGGCATCTATAGATTACCCCGATTTTACCGTAATCCAACAAATGCAAGAGGAGCAGCAG
CCTCAACCAGGACCTTCTCCGGTACACACGCCCCACTTAGCTCTTCAAATGCATAACCCGCAGAACTGTGAGTCGTCACA
AAATACCAGCCAGGATCCATAA
PEP:
>LH16594-PA
MTIATRGQGVGIDPPDSQQSTQMHSPPGPQQLADTMSGLQLTENVVQTECNSDAITTVEDSNQLHGEPDFPISKLNMLHE
KISSPRWVVPVLPEQELECLLQASIELCKKGIDVQSEACQRFFREGLTISFTKILTDDAVNSWKLNIHNCINANCARLVE
LCVLKLDEDWFPLLDLLAMVFNPSNKFHTFNAVRVSETVPLGSDIPDEELYARPPPDSRSPRGWLVDLINRFGSLNGFEI
LLSRFQSGRNLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVEMVPLILNNLTDDELKKEAKNESKNDAISAIIKAAKC
LVSRVPHQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIVEEEEWLTAERMAKWIKDNGVL
EIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSW
RTANKKQREKLLELIRRLAEDDKDGVMAHKVLTLFWTLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCV
EELKNGDKWALPALKQIREICCLYEPNPNLSHSQRSHHLHYRQEVIERLQSEHSVVILVTNSLTNYMDKVRQLVKENPEI
DANTFMPDGRYNHIIQVQERLNFLRFLLKDGQLWLCAEQAQQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINK
DFFQNNILQLDPTLLTESGIKCYERFFKAVNSKEGKLKLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIANRGIELLKEVN
TNLGPRLQSSVLAFHETYIAECMDRLKAHYDTVTVLSRVYLDGKEEREEQMTNKIKMEAIKMCRVMKVLQEYINECDTAF
PGERKILPLHRAARGKHLSLVIRFASPGRNVDDIDIFTHSNDTLASLRRQILRRIKASGTNVKLDLFINGESLEQADDRK
LLSQIPLRDKMLLSAKLSQVNSNMPSSPDSSSDSSTSSPHHPYDGPNVEAENSLPGVVMSQRSQYATFFFQLADLGCTLQ
HSQLRDGARNLLQLVPPDILTVTRLQWLFGHYKDDETLQNPSQYHCNEQNTTVDSLFFTASPSQVLYNLEVLYTLLMPAL
DPMSERAFEFQYNFIKSGEAGVILDMLTKNKFLPNADETTKRSAYLTVLRLCKLLLTVMGNVMACVLDEVQQTGTPENHD
NHVNNRGRIAVLKQALQSVPNQSTEYMLRNVAAKLAQHLAHRMISGGPEADRCRQLFVQALSWELPDVATIRAIIRLAWA
ASTGNLSNINASNEALHSIHEANQKEQRNPDNNDVLVCKEALEVLTIALVLNPSALETLSRDKIWHTFLIDLVLLSTSRA
IRIAAGEQFFLMSTWCSGGHQTLSVTITLLFTVLNTTVMENAKQSHEYFQLLCRLLNFAHISNCPLTTAETLLNVEIAWL
KKVRDNVKETGESQVDEALLEGHLGLTKELLAFLPPNQKYEIGSDEKHGVNLIKELVEDFVFPASRLMLQLRSTGELSAS
QACPVCTTPQSTSAAFDLLVGLCVGCVPNMKLLVTMLTDMFYSEKDEPLVEWDYLPPVGLRPLKGFVGLKNAGATCYMNS
VLQQLYMVESIRVGLLAAEGAATDLNEDFSGEERIEGEQTIETNDNDTNEEKCGADESRKEYNIGILKQVQAIFGHLAYS
KLQYYIPRGLWKHFKLQGEPVNLREQQDAVEFFMSLVESLDEALKALGHEQIMGKILGGSYSDQKICKGCPHRYSKEEPF
SVISVDIRNHSNLLDSLEQYVKGELLEGADAYHCDKCNKKVVTVKRLCVKKLPPILAIQLKRFEYDFERVCAIKFNDYFE
FPRDLDMEPYTVSGLAKLEGEVIDCDYEEAVKGTCTKYQLTGIVVHSGQASGGHYYSYILHRLNDGTAKWYKFDDGDVTE
CKMEEEEEMKSQCFGGDYLGEVFDHMLKRMSYRKQKRWWNAYMLFYTRLDVEENSLMKSVNELSLYTKLGVMKMPPAIEY
SVRKQNIKFMHNRNQFSAEYFQFIKKLVSCNPHNINRQNLNEKLSPEAEELAMLSLQLVSRFLFYTGFHTKKTLRGTATD
WYDIVCHHLRSSKVVRSWFANEVLFNHPHRFCEYLLSCPSTEVRTAFLKILVFLAHVSLQDGPCAPPSLNAPTILLDPVA
TLSDHLLHAVLSLLHREISDHGRHLPHYFSLFHAYASLGLAEKAQLLKLNVPVTFMLVAIDEGPGPTIKYQYPELTKLHQ
VVSMLIRCCDVSSRAHSSHTQPRAEPLPNPYGDPACQSEYIMPIPSQAADILFIRTSYIKKLIEDANVTEDTVKLLQYCC
WENPHLSRTVLSELLWQIGFAYTHELRHHTDLLLAILLMEDSWQTHRVHNALRGVPDEREGLFETIQRSKNHYQKRAYQC
IKCMVQLFSKCKPAHQLLYHSPELKRKWSHAIDWLHDELDKRPYASTAPYTHAYNNWSPPAQSNDSANGYVLERSNSARK
TLERACELCPDEEPEVEDTSEDCAEEAEKYQHSSKYQSSNTSKYQSSFRTKRRNNRGTLGWASIDYPDFTVIQQMQEEQQ
PQPGPSPVHTPHLALQMHNPQNCESSQNTSQDP
Swiss-ProtProbable ubiquitin carboxyl-terminal hydrolase FAF-X
KEGG     K11840     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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