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Gene detail [Fasta]

Species Linepithema humile
GeneLH11010
Positionscf7180001004422:24460..36224[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH11010
sequence mRNA: 
>LH11010-RA
ATGCCAGACAAAAAGACCGACTTAGATAAGTTAGCATGGGCATGGATAGAAACCATTAGCCCAGAACAGATTGAGAAAAT
ACATTTAGAGACTGCATATAGGATTGGATTAAAGAGTTGCAAGAATTGCAAACGTAATTGTCCCAATAATCCACAATGTC
TAACAGGTTTAGGAGAGGAAAAGTACATGAAGTCACAACCAGCTGAAGTAGTATCTTTAGAAAGTTCTCTATCCGAACTA
CGTGATCCAACTCAATATGTGGGTTTGAAAAATCTAGGTGCTACTTGCTACGTTAATAGTTTAATACAAATGTGGTTTCA
CAATGAAGATATGAGGAGGATAATATATAAATGGGACATTACTGAAGACCCTGAGGAGAAGGAGGCACTGTACCAGACTA
AGAAGGCGGGACTACCCTACCATCCAGCAACCGCAGTTGGCCAATTGCAGTACATTTTTGCAATGATGCAATTTGGAAAT
CGAAGTCTTCTCGATCCAATCAATCTCGCTGTCGCGTTATCCTTGGATACCAGAACTCAGCAGGATGCTCAGGAATTCTC
CAAGCTGCTACTGTGCCATATTGAAGGAAAACTTGGACAAAACTCAGAGCTGAAGAAGATGCTGCAGAGGCTGACCCAGG
GAAAATACAGCTATATCAATTGTTGTTCGACGTGCGGTACTGAGTATCCAACGTCGACCACATTCTACGAACTCGATCTA
CAATTGGCAGCGACTTTAAAGGAAGCGATAGATAAATATTTGTCAGAAGAACAATTGACGGGTGCGAATCAATATCATTG
TGTGACTTGTAATGATAAAAAAGACGCCAGGCGATTTATACGATTGGAGTCTCTTCCAGAAACCCTAAATATTCAATTAA
TGCGTTTTGTATTTCATAGAGATTCTGGGCAAAAGCGAAAATTAAATTCATATATCCAATTTCCTGAGGATCTCGATATG
TCGGAATATGTTGGATGTCAGTCTCAGACTCATTTATACAGTCTTGTTGCGGTATTGAGTCACAAGGGCCCATCTGCTCA
TTCTGGTCATTATATTGCAAATATATGTAATTCAAGTGGGGAGTGGTACCAATTTAGCGATGATAAGGTAGAAAAAATGC
AGACTAAACGGATTGAGGATGCTGTAAATGATAATGCTAAACCAATGAAACGTGGACGTGTTCCAAAAGGATTTCTTTCA
TCGAATACGGCTTATATGTTGGTTTACAAAAACTTGACTACAGATTGGCGAACGAATGCTACGAAGAAAATGAAACTCAA
AAAATCTGACACAGAAGCAAATATTTTCAGTGATACTGTTTCTTTAGAAAATCTCAAAGATAAGTTGGATATTGTAGATG
AAACAAAACCGAAAAATGATACCGAAGATGCTTCATTAATTCAAGAAGGAGATCTTGAGAAAATATCGAAACTAGAGCTA
GAAAATAAAACAGAAATAGATGAAGCTATGACATCTCAAAAGATAAATATGTTTTTTACGGATAAAAATAAAACTATAGA
AAATGTTGACACTAATGGATGTAAAAACAAACATGATTCTACTTTGCAACAATCGCAGAACAAGATTCAGTCTATAAAAC
AACCAATAGTAAAAGTTGTTAAACTTGATTATAAACAACTAAATGGTGCTGCGCATAGAGCTATGAGTTGCGGAGAACGA
GATTTCTACGAAGAGATGGAATTTGAGGATTGGCAAGTAAGTGGTACAATGCGTGAACTCGTTAGGCAGGAAAATGTTAA
ACACGAATTGAGTCTATTAGCCGTACAACAAGAAAAACAAAAAGAAATTGAAGATCAGAATTCTAAGCGTCAACTCGTGA
TAGATGCATATAATATGATCCAATCAATAGTATCTTGGGGTGAATATTATTGGATACCAACAGATTGGCTATCCAAATGG
TTAAACGGACATTCTACTGCAGACAGTGTTCCCCCGATTGACAATTCAACTTTAATATGTTCACACTATCGACTCGATCC
ATTGAAAGTTGGTCGAGCGAAATGTGTGCCGGTGAGAGCAGCTGAAATGCTTTACGACAAATATCGAGGAGGGCCGCGAT
TAGATCAAACATCTCTGTGTGAAATTTGCGTAAAAAGACGTTGTAAATTATTGCGTTTCAAAGCGACACTCGAACGAGAT
TATAAGGAAAGTAGTGAGCTAATTCGCACATTTAAAGAACCTTCCGAGACAAGTTATATCATTGGTACCGATTCATTACG
ATCTTGGCGAAGATTGGCTATGGAAATGTTCTTAGAAGATATGAAACAAAAGATAGACGATTGTCAGGAGGAGAATAAAA
ATGTAGATAAGGATGGCAATGATTGCCCGAAGGAAATCGAAGAAAACGAAGATCACGAAGTTATTATAAACTTCAATGAA
GATTTACTGTGTGAGCATGATGCTCTTAAAACGGCAGATTCTAGCAGAAGAGTGATACCCCAAGAGGCATGGTTAATTCT
TCGAAAGTATTTTCCGGATTCGAAAGAATACCCCATTGGATCGCAATCTTGTTTAATTTGTGAGGAGAAAGTGGAAAACG
CACAAAGAGCGAAAAAAGATGACAAGATAAAGGCGAAGCAACAAAAGGACGAGCTTACCGACTTGTATTACGGAAGAAAT
AGAAATGAAATCTCCAAATGTGATGATTCGGACAAACTGTTCTACATAGTTGAGAAAAGTTTTTTGGATAGTTGGCGTTC
CTTCATCCGGGAGAGAGAATCTTCGGTCGCGCGGGATAGTCCTCCACAGGCGGAGCGGGCGGAGAGGGAAGCGGCGAGGA
GGAGGAGGGGGGAGGAGGAGAAGGAGGAAGAGGGTAGTAGTGGTGGTGGTCTGAAGTTACACCGGCAGTAG
PEP: 
>LH11010-PA
MPDKKTDLDKLAWAWIETISPEQIEKIHLETAYRIGLKSCKNCKRNCPNNPQCLTGLGEEKYMKSQPAEVVSLESSLSEL
RDPTQYVGLKNLGATCYVNSLIQMWFHNEDMRRIIYKWDITEDPEEKEALYQTKKAGLPYHPATAVGQLQYIFAMMQFGN
RSLLDPINLAVALSLDTRTQQDAQEFSKLLLCHIEGKLGQNSELKKMLQRLTQGKYSYINCCSTCGTEYPTSTTFYELDL
QLAATLKEAIDKYLSEEQLTGANQYHCVTCNDKKDARRFIRLESLPETLNIQLMRFVFHRDSGQKRKLNSYIQFPEDLDM
SEYVGCQSQTHLYSLVAVLSHKGPSAHSGHYIANICNSSGEWYQFSDDKVEKMQTKRIEDAVNDNAKPMKRGRVPKGFLS
SNTAYMLVYKNLTTDWRTNATKKMKLKKSDTEANIFSDTVSLENLKDKLDIVDETKPKNDTEDASLIQEGDLEKISKLEL
ENKTEIDEAMTSQKINMFFTDKNKTIENVDTNGCKNKHDSTLQQSQNKIQSIKQPIVKVVKLDYKQLNGAAHRAMSCGER
DFYEEMEFEDWQVSGTMRELVRQENVKHELSLLAVQQEKQKEIEDQNSKRQLVIDAYNMIQSIVSWGEYYWIPTDWLSKW
LNGHSTADSVPPIDNSTLICSHYRLDPLKVGRAKCVPVRAAEMLYDKYRGGPRLDQTSLCEICVKRRCKLLRFKATLERD
YKESSELIRTFKEPSETSYIIGTDSLRSWRRLAMEMFLEDMKQKIDDCQEENKNVDKDGNDCPKEIEENEDHEVIINFNE
DLLCEHDALKTADSSRRVIPQEAWLILRKYFPDSKEYPIGSQSCLICEEKVENAQRAKKDDKIKAKQQKDELTDLYYGRN
RNEISKCDDSDKLFYIVEKSFLDSWRSFIRERESSVARDSPPQAERAEREAARRRRGEEEKEEEGSSGGGLKLHRQ
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 48
KEGG     K11858     
SUPERFAMILYSSF143791  DUSP-like superfamily     
Gene3DG3DSA:3.30.2230.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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