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Gene detail [Fasta]

Species Linepithema humile
GeneLH24408
Positionscf7180001005077:1224288..1228881[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24408
sequence mRNA: 
>LH24408-RA
ATGGATCTCAAATTTGTCGATGTACGTGGTCTAAGTGATGATGACAAAAATAAATTATTAGCTATTCTGAAATCTGACAC
ATTAAAATTGCCATGCGACGTTATAGAAAATAATGCCAATTCTGTGACAGAAGTATCAGAAGTATCAGAACTGCAACATT
GGTACAATGCCATGACACCGACGAATGTTAATACTTTTCCGCAACCGCTCATGGCACAATTATGCAATGAATGGCCAATG
TACAACGTTTCCACAAACGGCCATATGCAACCATATATGCCTGGAGTATTTTCATGTCCTGGATATCCAAAGCTGCATAA
TGTTGGTACCGAAATTCAATTCGGTACAGAAAATGAATGCCATAATAGTAGAGACAAAAATTTGAAAAGAGGTCACTACA
ATGGGACATTCAGTCCCATTAACGACATGCAATCAGGATATACTGGCGATCAAACACAATTCTCTCAAATACCGATCATG
TATATTTATCCCGATCATTCCATTTCTACTCAACAGCATCAAGTACCCGCCGGGCAGATTTATTATTCACCGCCAATGTA
TTCGTCGATTCCTCATCCGCATCCAAATGCACAACCTATCTCATCCAATGCACAGACACATCCCACTTATTCTCCAAATC
ATCAACTTCCACCGATGAATAGCTGCGTGCGACAATCATCTGCACCACTCCAGCAGCCAAACCAGGAATTTGTAAAGCAA
CCGATCATCAAATCGCATGAGAAACCTATACAAGACGCATATATTCCCGATAAACCGATATCCCAACAAGTAAATGAGAA
TAACTCTTCGCAAGTAGCCGTCGTTGTCGCTGTAAATAATTCTACATCAAAGTCGCCCGTTAAGAATGTTGTCGAAAGCA
CTGCCAATATAAAGAATGTGGTTAGCAGTGAAAAAATTGATGCAAAGATACAAAACAATACTTCACTTACGGCAAATGAA
AATTGTAATGGCACAGAAAAAGTCGAGATGACGCATGTAAGTAATGGCGCCGAGGCGAATCAAAATGGAAAGATAGATAA
GAAACTGAAGAACGAAATCGAGTCCAATACTACAACCGATGTAAAAACTTTGTCTAAACCTACCTTGAACAAGGTAGAAA
AAAGCAAATTATCGACCAAAGTGCAAATTAATGGTGCGCCAAAAGACACACAAAATAATATCGCTAAAACTCCCAACGGC
TCCCCATCTACATCGAATGATTCCACAGCCACGCCAAAAACTTTATCGCCCGTATCTACTGTATCTCCACCGGCTACGAA
AGCCGTTAGATCGTACGCTAGCTTGTTTAGGAAGAACAGCATTGAATCGCAGACAACTCCATTATCGAAGCCAGTACAGG
TTGCTGAACAGAATGGATCACCAAAAACGCCAATCCAAAAGGAACCGACGAGTCCGAACTTCACTCCAGAGAATCAAAAC
GATTCACCCAGCACACAAACCACAGAAAACGATTATAAAATCCTGCAGAATGGTGTATTACATACTTATTACGATGATCC
TAATGCAGTCAGGATGGGTGAATTTTTGTCCAATTATCAAATGGATAAACAAACTGTAAGTTTGTTACCAAGGGGATTGA
CAAATCGCAGCAATTATTGTTACATCAATAGTATCTTGCAAGCTTTGCTCGCTTGCCCATCGTTCTACAATCTTTTAAAG
GCTTTACCACTTCCCAAAGATCGAAATTCCAAGAGTTCGCCTACGCCTTTGATCGATAGCATGGTTAGATTCGTTCATGA
GTTTACGCCTTTGGCAGAAGCTGCTCGCATGCCCAGAAAAGATCGGAAGGATCACAATAAGCGAGGAGAAGACACAGCTT
TAGATATATATAGTGGCGTTGCTTTCGAGCCGTCGTATATATATGAAACGTTAAAGAACACTTCTGCTGCTGGTGCCTTT
TCCGTGGAAGGACGACAAGAGGATGCGGAAGAGTGTCTATCGTGTCTTCTAAATGGCATCAACGACGAGATGCTAGAATT
GATGAAATTGGTTCCTAATGATCAAAATGCAGACACTAACGCGAATAATAATATTAACAACGATCATGATGAAGAAGAAT
GGCAGGTAATGGGACCAAAAAATAAAGGTGCTATCACACGATGTACGCAGTTTGGCAGAACACCACTGTCCGACATATTC
CGAGGACAACTGCGATCCAGAATATCGCGTGCAGGAGAGCAACCAACAGACAATGTACAGCCGTTTTTCACGCTGCAACT
TGATGTTCAAAAAGCTGAATCTGTTAAAAGCGCGCTTGATATCCTCGTTGGAAAGGATCAAGTAGAAGGGATGACGTGCA
GCAAAACCAGACAGCAAATTGAAGCGTGGAAGCAGGTTACCTTGGAAGAATTACCTGTCATTCTTATTATGCATTTGAAG
TGGTTCGTTTACAAATTCGATAAATATTCCAATGGATGCTCGAAGATATTGAAAAGCATGGAATTTCCTGTGGACTTGAA
AATTGATGGCAAATTTCTATCGCCGAACACTGCGAAAAAATTGAGTCCAAAACAGAAGCAATACAAATTATTCGCAGTGA
CGTACCACGATGGGAAAGAGGCCACGAAAGGCCATTACATCACGGATGCCTTCCACGTAGGATATGGATCCTGGGTTAGG
TACGATGACAGCACGGTGCGAAGTGTGACAGAGAGCAACGTGCTAAGGCCCACGTCGCCCCGAGTACCGTACTTGCTTTA
TTACCGAAGATGCGACACTATCGGTAATAATCAAACGAAGTAG
PEP: 
>LH24408-PA
MDLKFVDVRGLSDDDKNKLLAILKSDTLKLPCDVIENNANSVTEVSEVSELQHWYNAMTPTNVNTFPQPLMAQLCNEWPM
YNVSTNGHMQPYMPGVFSCPGYPKLHNVGTEIQFGTENECHNSRDKNLKRGHYNGTFSPINDMQSGYTGDQTQFSQIPIM
YIYPDHSISTQQHQVPAGQIYYSPPMYSSIPHPHPNAQPISSNAQTHPTYSPNHQLPPMNSCVRQSSAPLQQPNQEFVKQ
PIIKSHEKPIQDAYIPDKPISQQVNENNSSQVAVVVAVNNSTSKSPVKNVVESTANIKNVVSSEKIDAKIQNNTSLTANE
NCNGTEKVEMTHVSNGAEANQNGKIDKKLKNEIESNTTTDVKTLSKPTLNKVEKSKLSTKVQINGAPKDTQNNIAKTPNG
SPSTSNDSTATPKTLSPVSTVSPPATKAVRSYASLFRKNSIESQTTPLSKPVQVAEQNGSPKTPIQKEPTSPNFTPENQN
DSPSTQTTENDYKILQNGVLHTYYDDPNAVRMGEFLSNYQMDKQTVSLLPRGLTNRSNYCYINSILQALLACPSFYNLLK
ALPLPKDRNSKSSPTPLIDSMVRFVHEFTPLAEAARMPRKDRKDHNKRGEDTALDIYSGVAFEPSYIYETLKNTSAAGAF
SVEGRQEDAEECLSCLLNGINDEMLELMKLVPNDQNADTNANNNINNDHDEEEWQVMGPKNKGAITRCTQFGRTPLSDIF
RGQLRSRISRAGEQPTDNVQPFFTLQLDVQKAESVKSALDILVGKDQVEGMTCSKTRQQIEAWKQVTLEELPVILIMHLK
WFVYKFDKYSNGCSKILKSMEFPVDLKIDGKFLSPNTAKKLSPKQKQYKLFAVTYHDGKEATKGHYITDAFHVGYGSWVR
YDDSTVRSVTESNVLRPTSPRVPYLLYYRRCDTIGNNQTK
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 10
KEGG     K11841     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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