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Gene detail [Fasta]

Species Linepithema humile
GeneLH19473
Positionscf7180001004969:1181477..1186341[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19473
sequence mRNA: 
>LH19473-RA
ATGAATGATTCAACAGAGTTACTCATTGAGCCTCCATCTATTTGGCCTGATATCAAATTAGAATTGCGAGAATATATTGA
ATGCCCGGAACAATTACCCATACATCAGCTGGACGATGCCCAGTGTTACTGGTCTCGCAAAGCAGATATTTCTTCACTAT
TACAGTTTGATTTGGCTCCAATTGGCACTACATTGAAATTTGACCGTGATCCAGTAACAGGCAAGATTGGTGAGATGCAA
GAGATTATCTTGCAAGGTGCAGGGGAAACTGTAAGAAATTCCATGTCTATGACTCGTGCACCAGCACCATTTGCGGATGG
AGTTCGAGGCAATCCTAGTAATGTCCTATTTTGGCCAGGTGGTTTTGATGAACCAAAAGAGATTGAAAATGAACTTGGGG
ATAATATTGATTTTGAAAATGATTTAAGAACATTGGCGAAAGGATTTAGTTCGGGTATAGAATTTGAAAGTGACAATTGC
ACCCCCACTAATTACACAAAGAATGAAAGAGAAATTATAGTATCTAAAAGAGCTGAAGAATTAAAAATCAATAATGATAA
TATTAATTTAATGGCTGTTATACATGAAGAAGGAAATTTGCTTGGTTTATGCTCATCAGTTGAAGAACCAAAAAAAGAGA
ACATTCAAGCTATAGACAACAATATTTTTCCTATAGATGATATTCCTATTTTATACGAAGAGGTAAATATACCTATATTG
AAAATATCTGAAAAACAACCAGAACTTGCCAAGACAGAATGGGCAGAGCAGTTGGATGTATCTGTACCAGTGACTGACTT
TGATAGAAGAGTACCTGACCCAGCAATTAAGTTCGAATATGAATTAGATACTTTTCAAAAACAAGCTATTCTTAAATTAG
AGGAAAATTGTAATGTTTTTGTTGCTGCCCATACATCAGCTGGAAAGACCACTGTTGCTGAATATGCCATTGCATTGAGT
CAAAAGCATATGACAAGAGTAATTTATACATCTCCAATAAAAGCACTGTCGAATCAGAAATATCGTGAATTTAAAAGGAA
ATTTGAAAGTGTCGGATTGTTGACAGGCGATTTGCAAATAAATCAAAATGCTTCATGTCTAATTATGACAACGGAAATCT
TGCAATCAATGTTGTATTGCGCAGCTGATGTTTTACGAGATTTAGAATTTGTTATTTTTGATGAAAGGGGTCATGTATGG
GAGGAAATAGTCATTCTTCTACCACAGAATATCAGTATAGTAATGTTATCTGCCACTGTACCAAATCCTATAATATTTGC
GGATTGGGTAGGTCGCATCAAGAAGCGGAAAATGTATGTAATTAGCACTTTGAAAAGACCAATACCTCTTCTACATTACT
TGTATACTGGTACTGATGGCAAAACTAGAGACGACAAATTTTTAGTTCTTGATAGCAATAGTCTGTTCTTATTGGACGGA
TGGTACAAAGCAAAAAATGCGTCCGATAAAAAGAAAGATAAATCAAAAGATATCAAGAGAAAAATTCAAATGACTCCAAA
ACAGGAAGAAGTATTATGGAGGGCATTTATAAGTCATCTTCAGAGTAATGATATGTTACCTGTCGTTGTATTTACATTGT
CAAGAAAGCGCTGTGATATGAATGCTGCTACATTGAGGAATCTTGATTTAACTACTGCGCGAGAAAAGCATCAAGTGCAT
GTGTTCTTCCAATCTAACATAAGGAATTTGAAAGGTAGCGATAGAGAATTGCCGCAAGTACTTATGATGCAGGAACTGTT
AGAGAAAGGAGTGGGTATACATCACAGTGGGATATTGCCAATATTGCGAGAAATTGTAGAAATGTTATTCCAGAATGGTG
TCGTAAAGCTACTATTTGCAACGGAAACTTTTGCTATGGGAGTCAACATGCCGGCTCGTACGGTAGTATTTGATTCCGTC
CGAAAGTTCGACGGAAACAGCTTTCGTACTTTATATCCAACTGAATATATTCAGATGGCCGGTCGTGCTGGACGCAGAGG
TCACGACACCACGGGAACTGTCATAGTGATGTGTCGGAATGATGTGCCGCATTTTAACGACTTGAAACCTATGATGTGTG
GCGAGCCGCAAACATTGGAATCCAAATTCAAAGTCACGTATTCCATGCTTTTGAATTTGAGAAGGGTGAACGAATCAGTT
ACTGTCGAGGCAATGATGCGCAAGTCTTTCAAGGAATCACCGCTAGCTTTGCAAGAAGCGACATATAGTAGTGAATTAAA
AAAAATTGAGCAAGAATTGTTACATCTGCCGACTTTAACTGAAATGCAGAAGAGCCTTTCGACATTCTATCATGTGGCGG
TTGATTATCTGGAGGACGTTAAATTTCTTGGTCCCTATTTGTTCGAATCAAAAAAAACCTCGAAATATTTAACCGAAGGC
AGAGTCTTACTGATATCGTATGCGAATCATTATAACAAGCTAGCTTTATTGTTGCAAGTTATACATCATAAGAATTCCAC
TCAGTACAAAGTGTTGATACTGAAAGACGCAAACGAATCTAATTCCGAAGCTGCTGAATTTAAGAGTTTTCAAATATATG
AAAAATGGTGCGAGGTTATTGGCGTAACGAAGAAAAGGATATTCGTACCCAGCAATAATCCATCGCATGAGGTTGTGATC
TTGTCTTCGTGGCATATATTGAAGATAACTAAGTGCCAAATAAAAGTCGATCGCTGTTTGGTGCTGAATGATTGGGAGAA
GAGGCAAATCTCACGATTTAAAAACGATCCACCAGGACAGACGTGTCAAATGGCGATTCAAGAATTGACTTCTCTGTCAT
TTAACGCCGTCGCCAATGCTGAAGTTCTATGCCCATACATTGAATCTTCATTGAGAAATGATTTTCAACTAAGGATACAA
CATAGAGATCAACTAAAAGCTAGTCTCGACGATATGAAGTGTACGGAAATACCGAACTTCGAAGAACAGTTTAAACCTGT
ATTTGAGCGAAATCAACTTGAGGATAAAAAACGACAGTTGCAACTTAAGCTCAGTGATGAAGGCATGGCGCTATATCCGG
ATTATCTGAATATGGTGACACTTCTGAAACATTTAAGATATATAGATAACGATGAAAGAGTTGCTCTAAAAGGAAGAGTT
GCACTACAAATGGGTAGCAACGAATTACTAATAACAGAGTTAATCCTCAAGAATGTGTTGACTGTTTTACAACCAGCAGA
AATAGCAGCGCTACTGTCAGCACTGATCTTTCAACAACGCACAGATTCTGAACCAATGCTTACACCAAGCCTCACTAATG
GTTGTAAAATAATGAGCGAGGTGCATGCGGAATTGGAACATCTAGAGCAATACTATCAATTGTCAACGCTGTCATCGTTA
AATTCCGGTCTAGTAGAAGTAGTTTACGAATGGGCACAAGCCAAATCGTTTGCAGAGATTATGAAGATGACAGACGTTCA
AGAGGGAATTATAGTTCGATGCATACAGCAGCTTGGCGAAACCTTACGAGACGTCAAAAACGCGGCTGTAACTATAGGTG
ATCCAGTTTTGAAAGAAAAAATGGAGGAAGCTTCGACTGCGATTAAACGCGACATAGTTTTCGCTGCGTCTTTATATACT
CAAGACTAA
PEP: 
>LH19473-PA
MNDSTELLIEPPSIWPDIKLELREYIECPEQLPIHQLDDAQCYWSRKADISSLLQFDLAPIGTTLKFDRDPVTGKIGEMQ
EIILQGAGETVRNSMSMTRAPAPFADGVRGNPSNVLFWPGGFDEPKEIENELGDNIDFENDLRTLAKGFSSGIEFESDNC
TPTNYTKNEREIIVSKRAEELKINNDNINLMAVIHEEGNLLGLCSSVEEPKKENIQAIDNNIFPIDDIPILYEEVNIPIL
KISEKQPELAKTEWAEQLDVSVPVTDFDRRVPDPAIKFEYELDTFQKQAILKLEENCNVFVAAHTSAGKTTVAEYAIALS
QKHMTRVIYTSPIKALSNQKYREFKRKFESVGLLTGDLQINQNASCLIMTTEILQSMLYCAADVLRDLEFVIFDERGHVW
EEIVILLPQNISIVMLSATVPNPIIFADWVGRIKKRKMYVISTLKRPIPLLHYLYTGTDGKTRDDKFLVLDSNSLFLLDG
WYKAKNASDKKKDKSKDIKRKIQMTPKQEEVLWRAFISHLQSNDMLPVVVFTLSRKRCDMNAATLRNLDLTTAREKHQVH
VFFQSNIRNLKGSDRELPQVLMMQELLEKGVGIHHSGILPILREIVEMLFQNGVVKLLFATETFAMGVNMPARTVVFDSV
RKFDGNSFRTLYPTEYIQMAGRAGRRGHDTTGTVIVMCRNDVPHFNDLKPMMCGEPQTLESKFKVTYSMLLNLRRVNESV
TVEAMMRKSFKESPLALQEATYSSELKKIEQELLHLPTLTEMQKSLSTFYHVAVDYLEDVKFLGPYLFESKKTSKYLTEG
RVLLISYANHYNKLALLLQVIHHKNSTQYKVLILKDANESNSEAAEFKSFQIYEKWCEVIGVTKKRIFVPSNNPSHEVVI
LSSWHILKITKCQIKVDRCLVLNDWEKRQISRFKNDPPGQTCQMAIQELTSLSFNAVANAEVLCPYIESSLRNDFQLRIQ
HRDQLKASLDDMKCTEIPNFEEQFKPVFERNQLEDKKRQLQLKLSDEGMALYPDYLNMVTLLKHLRYIDNDERVALKGRV
ALQMGSNELLITELILKNVLTVLQPAEIAALLSALIFQQRTDSEPMLTPSLTNGCKIMSEVHAELEHLEQYYQLSTLSSL
NSGLVEVVYEWAQAKSFAEIMKMTDVQEGIIVRCIQQLGETLRDVKNAAVTIGDPVLKEKMEEASTAIKRDIVFAASLYT
QD
Swiss-ProtHelicase SKI2W
KEGG     K12599  SKI2, SKIV2L; antiviral helicase SKI2 [EC:3.6.4.-]     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00271  Helicase_C; Helicase conserved C-terminal domain     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
PIRSFPIRSF005198     
OrthologiGroup-00882    Helicase SKI2W      

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