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Gene detail [Fasta]

Species Linepithema humile
GeneLH19420
Positionscf7180001004969:121891..127957[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH19420
sequence mRNA: 
>LH19420-RA
ATGTCTGAGAACGTTCACAGCAAGGAGCAGTGGCAGCTCCTCCATAACCTACGTTCCACCGTGGAGGGTTTGTTGATCGA
CGGCGTGTCAAACGTGTGGAATGTTTACGGCGGGCTGAATCGATTGCACAATGCTATGGAACGGATTTTCAAGCACGGCT
GTCGCATATTTGATCCCAATGGTGAGCCAGATTGCTGGATTTTTATTCAAGGACTGAATTGGCTTCAACCTTCTTTAGCG
ACATCGCCGATATTATCGGAAAACGAGGAATATTTATGCAACTTGCCAACTAGAATAACATCTAAGAAAGACATGTTGTG
GCTGTACAAAAGTTTAGAGAGCCACTCTCTGTCGCACAAATTATCATGGCTTTTGTCTGATAAAGAGCATCTACTTTCTT
GCCTCGAACCATGGGCCTTTCTTTGCCAAGAAAATCTGGCGGAAGCAACGCTACTGTATCTAAGAGCAGTCGAGAGGAAT
CAGCCTGTGCTGCTCGCAGAGATTGATCCTTGTTTATTTCTGCCGACATGGGTGTCTCCTAAAGCAAGCCCCAGGCGACA
TCGCCGCTCGTCTTCGTACCCGGTGAACTTCTCCGGCGCCAGTCGCGTCTTCGCGCGAGACAAGAGCGCAAGTGTTTTTA
AAGAATGCCAGCTGGATCAGCTGAAAACCTCGATGCAATCAGTGTCGTGTGACACAGACTGCATAATCGGCGAAACGTCA
AAATCCGTACAAATCACCATTGAAGATAACGCGAAAAGCGACTCCAAGCACAAAGATGCACCCTTGAAAACGTGGAACAG
CCTGCCCGTTCTGGTAAAAAGCGCGGTTGCTGTGGAGAATTCAGCCACGATCTCATCGTCTCTTCAGGAGAGCAGCGGCA
GTAATCGTCCTCGCACGATCGAATTGGCGGAGATTATCAACATCAATTATTCAGATTCGAAGCAACCTGTCGACTCGAAA
GTCGACAAGCCGATAACGAAGCCAAAGACGCCCGTTAGAAAGACGAGGAGCCGAACGAAGGCGCGGCATAGTCAGATCAG
ACAAATCTCCTCCGAGGATCCAGAGGACGTCTTGAGTGTTCGGGAAAACGCTAGAAGCGCCGGCGAGACGTGGCCGATCG
GCGCAACGGCGCGGCTCTCCGCGATGACGGAATCGACAGAAGCGCAGCTCGACGCGACGGAGCCGCGAGCGACGCGCCGC
AAAACGTCCTTCCTGGCGGGCTCCGCGCCAGAGTTCACAGGCCCGTGGAGCCTGGTGGTGGAATCCGGTCAGAAGGACAT
CCGCACGCCGCGGAAAAGCTTCATGGAGGACGGCGGCAGCAGCGTGCAGCCGATGGCGACGGGCTACTTCCCGCGGCCCG
CCGAAGGCCAGAGCCTCACCAGCTTTCTGTCGTCGGCGCGCTTCTCGCGCGCCCACGACGCCGAGCTCGATCGCGAGAAC
GCGCACTTCAGCGTGTGCGAGGCGATGATCGCCGCGATCGAGCAGATCAAGTGCAATCGACTGGAGCGCCGATTATTGGA
CGTGGACGCGGGCGCCGATGACGAAAGTGACGAGGAGATCAACCGGCTGAAGCAGCGGATCCGGCTGCGACGCCGGCAGC
GTCAGGAAGAGAAGTGCCGCGGTAGAGGCTGGAGCCGCGGCGATCTATTGAGCGACGGCAGAACCGACACGACCACCACC
ACGGATCAAAGCGTCAGTCCGTTGTCCACGTCATCGAGCGATCCGTCAGACATATTTTTGTCGACGGACGTGGAGGACTC
CGAGTTAGACGACGAGCGGAGGCTCAGGAACAGCGGTGTGCGCGGATCAGTCGCGTCGTCGTTGCACTCGGACGCGGAGT
TGCGCGGCCAAACGAGGCATCACATTACAGACTCGACGCTGAGCGAGAGCAGCGTGTCCGCTGAAGGTGTGGCGTTGTCG
CTGATCAGCCGCTTTAGCGAGAAGCAGCTGCCGCGCGCGAGCGAGTTGCAGTGGCTGGTCTCGGAGAAGGACGCACCGCA
GCGGTTGCTGCCGATGCCGAAGAGCTGGCCCGTCAGCCCGGACGAGGTCGAGATCGAAGACGCGCGTACGATTCCGCTGA
GAGGCACGATTGAATGGGCTCCGCCGCGACCGCAGATCATCTTCACGCCTCATCCGCCGCCGATGAGGCGGACGCTGATA
GCGAAGCAGAATTACAGATGCGCCGGTTGCGGTATGAAGGTTGCGGTGAAATACGCCAATCGATTTCGATATTGCGAGTA
CCTGGGGCGATATTTTTGCACGGGTTGTCACACGAACCAGGTGGCGTTTATACCCGGAAAAATCCTGTCCAAATGGGACT
TCAACAGATATCCCGTGTCGAACTTCTCGTACAGACTGCTGGACCAGATGGTGTCGGATCCGCTGTTTCAAGTGAACGAC
CTAAATCCGCTATTGTACAGACGCATAAAGCAATTGGACAAAACGAGAGTCTTGCGCACGAAGTTATTCTTCTTAAAAGA
TTTCTTATTCACGTGTCGATTCGCGACCAGTGTTCAAGATGTGCTGAAGAAGGAGCCGAATTACATCATAAGCGATCCAC
ACGTGTATTCAATTCAGAATTTCATAGACGTCAAATTGAGTGTATTGTCTGTCAAGCTGCAAGAACTCGTTCAAGTTTGC
TGCGCGCACGTTGTAGATTGCGAGGACATCATATTCCCGTGGGATCTGTCGAAGGTGGTGCGATGCAGCAAGTGCGGCGC
GTGCTTTCACATAAGCTGCAAGCACGGCTCCAATAAGCTCGAGTGTCCTCGATGCACGAGGCTGCACGCGAGACGACTTT
CGAGGGACGAGAAGGCCTGA
PEP: 
>LH19420-PA
MSENVHSKEQWQLLHNLRSTVEGLLIDGVSNVWNVYGGLNRLHNAMERIFKHGCRIFDPNGEPDCWIFIQGLNWLQPSLA
TSPILSENEEYLCNLPTRITSKKDMLWLYKSLESHSLSHKLSWLLSDKEHLLSCLEPWAFLCQENLAEATLLYLRAVERN
QPVLLAEIDPCLFLPTWVSPKASPRRHRRSSSYPVNFSGASRVFARDKSASVFKECQLDQLKTSMQSVSCDTDCIIGETS
KSVQITIEDNAKSDSKHKDAPLKTWNSLPVLVKSAVAVENSATISSSLQESSGSNRPRTIELAEIININYSDSKQPVDSK
VDKPITKPKTPVRKTRSRTKARHSQIRQISSEDPEDVLSVRENARSAGETWPIGATARLSAMTESTEAQLDATEPRATRR
KTSFLAGSAPEFTGPWSLVVESGQKDIRTPRKSFMEDGGSSVQPMATGYFPRPAEGQSLTSFLSSARFSRAHDAELDREN
AHFSVCEAMIAAIEQIKCNRLERRLLDVDAGADDESDEEINRLKQRIRLRRRQRQEEKCRGRGWSRGDLLSDGRTDTTTT
TDQSVSPLSTSSSDPSDIFLSTDVEDSELDDERRLRNSGVRGSVASSLHSDAELRGQTRHHITDSTLSESSVSAEGVALS
LISRFSEKQLPRASELQWLVSEKDAPQRLLPMPKSWPVSPDEVEIEDARTIPLRGTIEWAPPRPQIIFTPHPPPMRRTLI
AKQNYRCAGCGMKVAVKYANRFRYCEYLGRYFCTGCHTNQVAFIPGKILSKWDFNRYPVSNFSYRLLDQMVSDPLFQVND
LNPLLYRRIKQLDKTRVLRTKLFFLKDFLFTCRFATSVQDVLKKEPNYIISDPHVYSIQNFIDVKLSVLSVKLQELVQVC
CAHVVDCEDIIFPWDLSKVVRCSKCGACFHISCKHGSNKLECPRCTRLHARRLSRDEKA
Swiss-ProtRun domain Beclin-1 interacting and cysteine-rich containing protein
SUPERFAMILYSSF140741  RUN domain-like superfamily     
PfamPF13901  zf-RING_9; Putative zinc-RING and/or ribbon     
ProSiteProfilesPS50826  RUN; RUN domain profile.     

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