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Gene detail [Fasta]

Species Linepithema humile
GeneLH24906
Positionscf7180001005082:310047..312415[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH24906
sequence mRNA: 
>LH24906-RA
AAAGCGCTGATGTGTTTCGATTACATAATGATTTGGTTTGCGAAGGTACAAGCAAAATGTTGAATGGCTATCGAAATCAA
CTGAGCAATCACCAGGATGGAAGTTACGACATGCCTGGTACCAATACAGAAGGATTGAAGATAGCCACTTTATGTAATCT
AGGAAATACCTGCTTCCTCAATAGTGTGTTATATACTTTAAGATTTGCACCTTCTTTCCTGCACAATTTACATCACCTAG
CTACTGATTTGTCTAATCTAAATGACAAACAACTCCAAACAAAAGCCAAATCCTCTTCATTAGGTAGAACTGGCGTATCG
CTAACATCGAGCAGTAGTCGTAGCTGGAGCAGCAAAGATCTATTGGCCCTAGCTGGACCGACAGCAGAAGCCAACAAACC
TCGTATTCAAATAGCTACTGAGAAATTGCACGAGGTCTTCATAGCATTGCGAGCACTAGAGGCAAGAGAAAATAGCGAGC
CGTATCAACCAGACGCCTTCTTACAAGCTCTTAGAGAGGTCAATCCGATATTTGAGGGAAATCAGCAACAGGATGCTCAC
GAGCTTCTAGTCTGCTTACTTGATAACATCAGGGAGACCTTTCAGTTGTTGGTCAGACACAGAGAGAGTCAGTTTGGTCA
GAGCAATGGTGGCTTTCCCGACTTTACCATGGATCATTCGACAGTGGACGCTCAGTCAGAGAGTAGCAGCAGTTCCGGAA
AAAGGAGCATTCGTAAATCTAGAAAGAAAAAGAAGATCACGAGCAGGGGAAGTTCGGTATCTCTTGTACAGCCAAATGCG
AACGGTGTCGCGACGTCTGCAAGACCGTACGAGAATGGTCATGCGGAGTTCGCTGAGAGTAATGGCGAGATAGGAATGCG
CAAACCAGAGAGCAAGAAGTGCTTTATCTCGGAGGATTTTGAAGGAGTTAGCTTGTTGCGCACAACATGTCTTGAATGCG
AACATGTCACAGAACGGAAAGAAACATTCTGCGATATATGCGTGCCCATCGACATCGATCGTTCGAATGAAAAAGACGAT
GATGGTCGATCAGTCGATAGCAGCGAAGTTTACAAACGTGCTGTAGTGACAAGCGAGCTGCTTTGGGGCAGGGATAAATA
TTGGTGCGCACGTTGCCTACGATATAACGAAGCTCGTCGAGCCGTATGTTTTCCCTCCTTGCCGAGACTCCTTATTTTAC
AATTGAAGAGATTTTCCACTGCTGCTGGTTCGATGGAAAAGATCAACAATCACATGCCGACGCCGCTCACCTTGCAATGC
TTCTGCGAGGAGTGCAGCAACGATCATGGGACAGGAGCCGGTAATATCGAGACACGGCACGTATACAAACTATATTCTGT
CATAATGCATCAAGGCGCAACGATGACTGCCGGGCATTACGTCGCCTACGCGCGCCTGCCGGATGAGTCCGCGTACGCGG
AATACTTCCAGTGCGATCGCGACAGTAAGCGGCAGAATCCTGGTCAGAGCGGTTCAGCGAGCACGAACTCGTCGTCGTCC
TCCTCTTCCTCCTCCGACAAAGCATCAGGCATACTCAAATGCATATTCAGAAGCAAGCCCAGCGCGAATGAGAACAAAGA
GCAGTTGGTGAACAGAGTCGGCTGTCGCAGTATGGATTGTTGCGGCATCAGGCGCAACAAGCAGGGCGTCACCTGGCTGG
AATGCGACGACGAGGCGGTGCACGTAATACCATTGCGAGAACTCGAGGATAAACTGGCGCCGAATCCGCGAAACTCCGCC
ACCCCTTATCTCCTGTTCTACGTGAGGTCGACGACGT
PEP: 
>LH24906-PA
MLNGYRNQLSNHQDGSYDMPGTNTEGLKIATLCNLGNTCFLNSVLYTLRFAPSFLHNLHHLATDLSNLNDKQLQTKAKSS
SLGRTGVSLTSSSSRSWSSKDLLALAGPTAEANKPRIQIATEKLHEVFIALRALEARENSEPYQPDAFLQALREVNPIFE
GNQQQDAHELLVCLLDNIRETFQLLVRHRESQFGQSNGGFPDFTMDHSTVDAQSESSSSSGKRSIRKSRKKKKITSRGSS
VSLVQPNANGVATSARPYENGHAEFAESNGEIGMRKPESKKCFISEDFEGVSLLRTTCLECEHVTERKETFCDICVPIDI
DRSNEKDDDGRSVDSSEVYKRAVVTSELLWGRDKYWCARCLRYNEARRAVCFPSLPRLLILQLKRFSTAAGSMEKINNHM
PTPLTLQCFCEECSNDHGTGAGNIETRHVYKLYSVIMHQGATMTAGHYVAYARLPDESAYAEYFQCDRDSKRQNPGQSGS
ASTNSSSSSSSSSDKASGILKCIFRSKPSANENKEQLVNRVGCRSMDCCGIRRNKQGVTWLECDDEAVHVIPLRELEDKL
APNPRNSATPYLLFYVRSTT
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 1
KEGG     K11832  USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     
OrthologiGroup-00735    Ubiquitin carboxyl-terminal hydrolase     

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