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Gene detail [Fasta]

Species Linepithema humile
GeneLH21460
Positionscf7180001005009:373405..386733[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH21460
sequence mRNA:
>LH21460-RA
ATGCGAAAATGATGTCAACGGAGTACTTTGAGAAGCGCAAGAGCTAGCAGAAATGAGGCAGCCTTGGAATTCGAGTGTCC
CGAAGATTTCGGCTATTATCCTCATCCGCGCGATTGCACGCAGTATTATGTATGCGTTTTCGGCGGCGCCTTGTTAGAGT
CTTGCACGGGAGGCCTTATGTACAGTCACGACTTGCAGACATGTGATTGGCCGCGAAATGTAGGCTGCCCGGAAGGAAGT
TTGTCTAGCAAGGAAGACGAAGAGGATCCGTTGTTGGGAAGATCCGGGAAACTCGGGACACTACAAGAACCACAACAACA
GCAGCAGCAACAACCACGACAGCAGCTACGCGATCAACAGCAACAGCAGCAGCAACAACGACCGATTCAGAAGCAACCGA
TCACGATTGCGAGCACGTCCGCGCCGGTGTCGCAGATCACCGAGAGACAGTTGCGACAGCGGCAGCACTCGAGGACTAAT
TATCATGAGGACGAGTACGGTCCCGCTTCGGAAGTCGAAAATGATAGGCAGCAACGAGTGTACCGAGGACAGCCTTCGAC
GATCGGTCAAGTGCAACGCGACCGCGACGGACTGCGACGGAACATAATATCGGAGAGAGAGAAGGATAGCTTGGTAAACA
CACGTGACCAAACTGAATCTCATTACAGGGCGCCCGTTTCAACTTCCGAATCGCCAAGACTTGCTAAAACTCTGACTTCG
ACCGCGGCACCGATCATATCAAAGTCTTATTATAGCGATCCGGATCAGAGTTATCCGTATTACACGATTTACGATGATGA
TGTCTCCATTTACAAAGACGATGATTACAATCAATATACTGTCAATCATACTTTGCCAGTACAACAACCAAACGTAAAAA
TTAGCGAGGTAAGCACGAAGCAGTATCAAAAACCGAAGAAAGTCGGCGAGGCGGATAAATATAATTTCAACCATGATGAC
TACGATATCTACGAAAATCAGGCTCAACTCAATAAGAACAAGTTCCGCATATCCGACGGTCAACAGTTCAGGACAAACGT
GCTCAGCCATCCCGTTGTTCACGTGACAACGCCAAACGTCATCGTCGACACTTTTATACCGCTGACCACGAGCACACAAA
CTCCCAGCACGACCAGCAGACCTTACACCATTAACGTACCAAGACGATCCCGGCCTACCTTAAAGCCATCAACCGAGATA
GTCTCAAAGGCGCAGGAGTTCGTTGACATCTACAGGTATCCTCCGGTGAGACCGGCGACGATTTACCCGACTCCTCAGGT
TGACAAACCTGCAGCGAAGTGTCGCAAAGATGTTTGTCTGCTTCCGGATTGTAGTTGCGGTGGCGCCGACATACCAGGTG
GCATTCCGTCCGAGCAGACGCCGCAGATCGTTCTGCTCACTTTCGACGACGCCGTGAACGATCTTAACAAACCTCTATAC
AGCGATCTGTTCGAAAATGGCCGTGACTACTTGCCGGAAGAAATACCGCAAATTGTTCTCCTGACCTTTGACGATTCCGT
GAACGACTTGAACAAGGGTCTCTACGCCGACCTGTTCGAGAAGGGACGGAAGAACCCCAACGGATGTCCCATCTCGGCCA
CGTTCTACGTGTCCCACGAGTGGACCGACTACAGCCAAGTTCAAAATCTCTATGCCTCGGGCCACGAGATTGCTTCCCAC
ACGGTCTCGCACAGTTTCGGCGAACAGTTTTCGGCGCGAAAGTGGGGACGAGAGGTTGCTGGGCAGCGAGAAATTCTGGC
CGCATACGGAGGCGTCAAACTAGAAGATGTTAGAGGAATGAGGGCTCCCTTCTTATCGGTCGGAGGAAACAATATGTTCA
AAATGCTCTGGGACACGAACTTCACGTACGATTCGTCCATGCCCATTTATGAGAACCGACCACCTAGCTGGCCATATACA
TTGGACTACAAGCTGTTCCACGACTGCATGATACCACCCTGTCCCACGAGATCCTATCCGGGATTGTGGGAAGTTCCTAT
GGTAATGTGGCAAGATCTCAATGGAGGTAGATGCTCCATGGGAGATGCCTGCAGTAACCCACCGACTCCGGACGGCGTAT
ACAAGATGCTTATTAAGAACTTCGAGCGGCATTACACGACTAACAGGGCGCCCTTCGGTCTGTTCTATCATGCCGCATGG
TTTACACAACCGCATCATAAAGAGGGCTTTATATCATTTCTTGATACCATCGTCGCGATGGACGACGTATGGATAATCAC
CAATTGGCAGGCATTACAATGGATCAGGAACCCGACACCACTGTCTCTTTTGAGCACGTTCGAACCTTTTGGATGCCATT
ATCCTGATCGACCCAAGAGATGCAACAATGCGAAAGTCTGTAATCTTTGGCACAAGAGCGGCGTGAGATACATGAAGACT
TGTCAAGCATGCCCGGATATTTATCCCTGGACAGGCAAGACCGGTATACGTAGCAGTCGCATCGACAACGAAGTCGACGC
CCATGAATGA
PEP:
>LH21460-PA
MYSHDLQTCDWPRNVGCPEGSLSSKEDEEDPLLGRSGKLGTLQEPQQQQQQQPRQQLRDQQQQQQQQRPIQKQPITIAST
SAPVSQITERQLRQRQHSRTNYHEDEYGPASEVENDRQQRVYRGQPSTIGQVQRDRDGLRRNIISEREKDSLVNTRDQTE
SHYRAPVSTSESPRLAKTLTSTAAPIISKSYYSDPDQSYPYYTIYDDDVSIYKDDDYNQYTVNHTLPVQQPNVKISEVST
KQYQKPKKVGEADKYNFNHDDYDIYENQAQLNKNKFRISDGQQFRTNVLSHPVVHVTTPNVIVDTFIPLTTSTQTPSTTS
RPYTINVPRRSRPTLKPSTEIVSKAQEFVDIYRYPPVRPATIYPTPQVDKPAAKCRKDVCLLPDCSCGGADIPGGIPSEQ
TPQIVLLTFDDAVNDLNKPLYSDLFENGRDYLPEEIPQIVLLTFDDSVNDLNKGLYADLFEKGRKNPNGCPISATFYVSH
EWTDYSQVQNLYASGHEIASHTVSHSFGEQFSARKWGREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNNMFKMLWDT
NFTYDSSMPIYENRPPSWPYTLDYKLFHDCMIPPCPTRSYPGLWEVPMVMWQDLNGGRCSMGDACSNPPTPDGVYKMLIK
NFERHYTTNRAPFGLFYHAAWFTQPHHKEGFISFLDTIVAMDDVWIITNWQALQWIRNPTPLSLLSTFEPFGCHYPDRPK
RCNNAKVCNLWHKSGVRYMKTCQACPDIYPWTGKTGIRSSRIDNEVDAHE
SUPERFAMILYSSF88713  Glycoside hydrolase/deacetylase superfamily     
Gene3DG3DSA:3.20.20.370     
PfamPF01522  Polysacc_deac_1; Polysaccharide deacetylase     
OrthologiGroup-00860    Probable chitinase     

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