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Gene detail [Fasta]

Species Linepithema humile
GeneLH18905
Positionscf7180001004956:1558089..1560857[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18905
sequence mRNA: 
>LH18905-RA
ATGTCGTTTACTGTAAATCAAAACTTGAGGAATGATCGACAGAAAGCGATGGCGGCGCAACAGCAACGACAGACGGTCAC
TTCGACCGGCATCTTCAACCACGAGAAGCACATGGCATCGAGCTCGCAATCGAGCATCACGATTGCATCCAAGTCGGGTG
TAAGCGCGTCCAAATCGATGATCAGTGCGGCAAGCGCGGTTAACCAGTTGATGAACGGCATGCGACCTCCGACGGCGGAG
GACGAGCTGCTGTCTCTACCCTTGGACGATCTGGATCTGCTGTGCTCCAAATCGAATCCGCAAGATGTGGACTGCGCGAT
CGCCAAGTACTGCGGCCTGCTCGACAGCTTCGTCGAGCGGCTGAAAACGAGCACCGATGGCGGCAAGAGCGGCGGCAAGG
CGCCGCAATTACTCAACAGGGTGAACGAGATCATCCGGAAGGCTTGGGCGGTGCCGACGCACGGCCACGAGCTGGGCTAC
ACACTGTGCAACACCCTGAGGACGCGCGGCGGCCTCGATCTGTTGATGTCAAACTGTGTGGCGAACGACGACGAGCTGCA
GTTCTCGTCGGCTAGGTTGCTGGAGCAATGTCTGACCACGGAGAACCGCGCTCACGTGGTGGAAAACGGTCTAGAGAAGG
TGGTGAACGTGGCGTGTGTGTGCACGAAGAAGTCCGCGAACTCGGTGGATCACGCGCGCGTCGGCACGGGCATCCTCGAG
CACCTGTTTAAGCACAGCGAGGGCACCTGCAGCGACGTGATCAGGCTGGGCGGGCTGGATGCGGTGCTGTTTGAGTGCCG
AAAGAACGACATAGAGACTCTACGGCATTGCGCGGGCGCGCTGGCGAATTTGTCGCTGTACGGCGGCGCCGAAAACCAGG
AAGCGATGATCAAGCGCAAGGTGCCGATGTGGCTGTTCCCGTTGGCTTTCCACACCGACGACAACATCAAGTATTACGCT
TGCTTGGCGATCGCCGTGCTGGTTGCCAACAAGGAAATCGAGGCGGCCGTCCTCAAGTCCGGTACTCTCGATCTCGTCGA
GCCGTTCGTCACGTCGCACAACCCCTACGAGTTTGCCAAGTCGAACCTGGCGCACGCTCACGGCCAGAGCAAAAATTGGC
TGGAAAGACTCGTGCCGCTCCAAGCGCGAGGAGGCTCGCAACCTGGCGGCCTTCCACTTTGCATGGAGGCAGGCATCAAG
AAGCGGCAGGGTAACACAGAAATCTTTCGGACAATCGGCGCGATCGAGCCGCTGAAGAAAGTAGCCAGTTGTCCGAATGC
GATCGCGTCTAAGTACGCGGCTCAGGCTCTCAGATTGATCGGCGAGGAGATTCCGCATAAACTCAGTCAACAGGTGCCGT
TGTGGTCTACCGAGGACGTTCGAGAGTGGGTAAAACAGATCGGCTTTGCCGACGTCGCTCCGAACTTCGTGGAAAGCCGC
GTGGACGGCGATTTGCTGCTACAATTAACCGAAGAGAATCTGCGCGAGGACATCGGTCTGACGAACGGTATCATGCGCCG
TAGATTCGCGCGCGAGCTGCAGAACCTGAAGAAGATGGCTGATTACAGCAGTCGCGACACCGGCAATCTCAATAGCTTTT
TACAATCGATCGGCCAGGAGTTTTCCATTTATACGTACAGTATGTTGAATGCCGGCGTGGACAAGGACTCGATACGCAAT
CTGTCGGAGGATCAGCTGCTGACCGAGTGCGGCATCGCCAACAGCATTCACCGGCTCAGGATACTCGACGCCATCAAAAA
CATGCAGCACAATCAGTTCATCTCGTGCGAGTACGAATCGCCCGACAAATCGCTCGACGTGTTTGTCAGCTATCGCAGAT
CGAACGGCTCGCAGTTGGCGAGTCTCTTGAAGGTGCACCTGCAGCTGCGCGGTTTCTCGGTGTTCATCGATGTCGAGAGA
CTCGAAGCCGGCAAATTCGACAATAACCTACTGCAGAGCATCAGGCAAGCCAAACACTTCCTTCTTGTGCTCACGCCCCA
AGCTTTGGAGCGGTGCGTACAAGACAGCGAGTGTAAGGACTGGGTTCACAGAGTGAGTTCTGATACTTTTTACTCGGAAA
TATTAAAAAATGCAATTGAAATTGTTGCCGCGTTACAATCACAATGTAATATAATTCCGATTATCGACAATTTCCAATGG
CCGGAGCCTGAAGAACTTCCCGAGGATATGCGAGCAGTCTGCCACTTCAACGGTGTCCGCTGGATTCACGACTATCAAGA
CGCCTGCGTAGACAAGTTAGAAAGGTTTATGCGAGGTGAGATGCCCGTGAGATCTGAGCCGTCCGGCGGAATTCCGCGCA
GCGTGGCGCCCAAGGACGTGACCCAACCGAGCACACCGGGTAACACAAATATACGACAGCCGCCTAGCTATCAGCGGATG
CACAGCAACGAAAGCAGGGGCAGCGACAAAGATTCTACAGGCGGGCGAGACTGA
PEP: 
>LH18905-PA
MSFTVNQNLRNDRQKAMAAQQQRQTVTSTGIFNHEKHMASSSQSSITIASKSGVSASKSMISAASAVNQLMNGMRPPTAE
DELLSLPLDDLDLLCSKSNPQDVDCAIAKYCGLLDSFVERLKTSTDGGKSGGKAPQLLNRVNEIIRKAWAVPTHGHELGY
TLCNTLRTRGGLDLLMSNCVANDDELQFSSARLLEQCLTTENRAHVVENGLEKVVNVACVCTKKSANSVDHARVGTGILE
HLFKHSEGTCSDVIRLGGLDAVLFECRKNDIETLRHCAGALANLSLYGGAENQEAMIKRKVPMWLFPLAFHTDDNIKYYA
CLAIAVLVANKEIEAAVLKSGTLDLVEPFVTSHNPYEFAKSNLAHAHGQSKNWLERLVPLQARGGSQPGGLPLCMEAGIK
KRQGNTEIFRTIGAIEPLKKVASCPNAIASKYAAQALRLIGEEIPHKLSQQVPLWSTEDVREWVKQIGFADVAPNFVESR
VDGDLLLQLTEENLREDIGLTNGIMRRRFARELQNLKKMADYSSRDTGNLNSFLQSIGQEFSIYTYSMLNAGVDKDSIRN
LSEDQLLTECGIANSIHRLRILDAIKNMQHNQFISCEYESPDKSLDVFVSYRRSNGSQLASLLKVHLQLRGFSVFIDVER
LEAGKFDNNLLQSIRQAKHFLLVLTPQALERCVQDSECKDWVHRVSSDTFYSEILKNAIEIVAALQSQCNIIPIIDNFQW
PEPEELPEDMRAVCHFNGVRWIHDYQDACVDKLERFMRGEMPVRSEPSGGIPRSVAPKDVTQPSTPGNTNIRQPPSYQRM
HSNESRGSDKDSTGGRD
Swiss-ProtSterile alpha and TIR motif-containing protein 1
SUPERFAMILYSSF52200  Toll/Interleukin receptor TIR domain superfamily     
Gene3DG3DSA:3.40.50.10140     
PfamPF07647  SAM_2; SAM domain (Sterile alpha motif)     
SMARTSM00454     
ProSiteProfilesPS50105  SAM_DOMAIN; SAM domain profile.     

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