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Gene detail [Fasta]

Species Linepithema humile
GeneLH18770
Positionscf7180001004956:269549..274577[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18770
sequence mRNA: 
>LH18770-RA
TCCTTGGCGAGGTGAGCACGGACGCGCGTACGCGAACAACGAGAACGTTCACGGGTAACGCGACGAGATGAGCAAGAAGC
GGAACAGGCAGCCAGATGCAAATCCCGATGTCAGCGAAGCCTCCACTGAGTCCTGCGAGGAAGCCAGTGCAGGTGCGAAA
TGTCCACATATAGTTAAGGCTATCAACTTGACTAAAGTGAAGAAGAACATAAAGAAGACTGGTATAGTGACCGAATGTTC
CATGTGCAAAAAGTTAGAAGTGGACTTAAAGAAAGAAGAAACGTGCGATGTCACAAAGCCTCTATGGATTTGTCTGCAAT
GTGGAGAGCAAGGCTGTGGCAAGGAGCAGAAGCAGCATGCCGCAGAACACCATAGAAAGCCCCACAGTGACTGCCATTGC
ATGGTAACAGATACTCACAATTGGAACGTTTGGTGCTATCAGTGTGAAATTGAAGTTTATCCCAGCAGCAAAAAAAAGTT
GTTGGAAACCGTGGAGTTTATTAAGAAGTGCGTTACTATGCCACAAATACCTCAACAATCAAAAACGCCACAAATTCAGT
GCCAAGAAGAAATAGTAATCGATGGTCTAGTAAATTTAGGAAATACCTGCTTTTTCAATGCTGTGCTCCAGTGCTTAGCA
CAGACTCCTTATCTGGTAAAAGTATTGGACGATTTACGTTTGCCCGGGCAGAAGTTTGTCTTGCCAGGGGGAAAGCACAA
GCCTGCAGATACCGAGGAAGAAATAGAATTGCCACCGATTGAAGGAACTTTGGAACGATGGGGCAGTTTCACCTCGGTCC
TCTGTGAAACCCTGTCAAAAATGCAGAACACCAATGGCCATCAAACCTACACGCCCACGAATCTCCTCTGCAAGCTCAGA
AAAAGACTACACAGTGCGTGGACGGAGAGATACCAGATCATAATTCTGAAGGAGGTCGGCCTGAGTGGGAAGACTAAACC
GGATTGCGTGGAAAAGGGCTTGAAATCTCGCGTGAAATTCTACGGCAATCAAGCCAGCACGCGGCTGCTAGGACCGGAAG
CGGTGTTCCGAGGTGTGCTGGTGTCTACGTTGGAGTGCTTGGACTGCCATCACTCGTCGCAACGCACCGAGCCATTTCTG
GACCTGAGCTTACCCGTCACTGCGGACAAGCCACAGCCACCGCTCTTGAAAAGGAAGAATAGCGAAATCGAGGATACTTC
CGACATGATAAACACTCAGCAGCGTGATCATCAGACCTCCGACACGCCCTGGAAACAGTTGAAGAAGGAAAAGAAACCAA
GTAGAAAGAACCGAAAAAATAAAAGGCAGGAGAATCATAACAATTCTAACGTGTTGATGGATTCGGATAATCCTACGGAA
GAAAATAACGATAACGTTCTAAAGTCAGAGGAGAGCGACGCCGATGTCGAGGATAACATCGAGGTGGACAATTCTCATCC
GGAGATCGGAGAGTCTGGCTACAGCTCGGAGAAGGCGTCCGCCGTCGCCAGTCCCGTATCGCCCGCTCATCATCCGAGCA
ACGATTTCAATAGCGACGTCAACAACACGTCGAGCTTGGAGGACGGTAATCTGGACAATAATTTGGACGCGGCACAAGTT
AGAAATCCGACGAGCGTAAACGCATTAACTAGCCCTAGTCCGACTGACGTGTCGATGACGGACTTGACTCAAATCAGGAT
ACCGTCCGAGAAACACGACCGGAACGTCGGTACGGTCAGTTCCGAGAACGAGGCGTCGGCCACGGCGTTGTCCACCTCCA
TGATCGTCAACTCCGACGTCACCAGCCCGGAGGCGCCTACCGCGAGCTTGAGCAGCTCCGCCGCTTCTAAGGAGAGCCCT
ACCAGCCCCGTCAATGGCGATGAAGTCGCGGAAAGGTTGGGTATTGCCGGGCATCAGTCGCCCAGCAGATACACGACCAA
AGAGGGCGAGTGTTCCGTGGAATCGTGCTTGAATCAATTCACCGCGTTGGAGTTGATGACTGGCAGCAATAAAGTCGTGT
GCGAGGCGTGCACAGCTCGCGAGAAGAAGAATCAAGAGAATCCGTCGAAAATGATATGCACTTCGAGTACCAAGCAGTAC
CTTATCTCTCAAGTCCCTCCGATATTAATATTGCATCTGAAGAGATTCCAGACGCAAAGAGTCGGCTTTCGGAAAGTTTT
CAAGCACGTGTCGTTCCCGATATTGTTGGATTTGGCGCCGGTCTGCAAAGGCCATAAGAAGCCTCGGATCTACTCGCTCT
ATGGAGTTGTCGAACATAGTGGAACTGTTCATGGTGGTCACTATGTTGCGTATGTCAAGACAAGACTGCCATTACCGCAA
GACGACCCGCGATGGAACTTCCTTCCCAAAGATAAGGATCCTAAACCGGACAATGAATCGAGCAATCTGAGCTCGGATTC
AGAAGAAGAGGCAGCATCAGCGAAAGCTTCGTCTGTTGTAGAAGCACCACCTGGAAGATGGTACTACGTATCAGATTCTC
GGGTATCAGAGGTAGATGAGAACACGGTGCTCAAGAGTCAAGCGTATCTCTTATTCTACGAAAGAATTCTCTGA
PEP: 
>LH18770-PA
MSKKRNRQPDANPDVSEASTESCEEASAGAKCPHIVKAINLTKVKKNIKKTGIVTECSMCKKLEVDLKKEETCDVTKPLW
ICLQCGEQGCGKEQKQHAAEHHRKPHSDCHCMVTDTHNWNVWCYQCEIEVYPSSKKKLLETVEFIKKCVTMPQIPQQSKT
PQIQCQEEIVIDGLVNLGNTCFFNAVLQCLAQTPYLVKVLDDLRLPGQKFVLPGGKHKPADTEEEIELPPIEGTLERWGS
FTSVLCETLSKMQNTNGHQTYTPTNLLCKLRKRLHSAWTERYQIIILKEVGLSGKTKPDCVEKGLKSRVKFYGNQASTRL
LGPEAVFRGVLVSTLECLDCHHSSQRTEPFLDLSLPVTADKPQPPLLKRKNSEIEDTSDMINTQQRDHQTSDTPWKQLKK
EKKPSRKNRKNKRQENHNNSNVLMDSDNPTEENNDNVLKSEESDADVEDNIEVDNSHPEIGESGYSSEKASAVASPVSPA
HHPSNDFNSDVNNTSSLEDGNLDNNLDAAQVRNPTSVNALTSPSPTDVSMTDLTQIRIPSEKHDRNVGTVSSENEASATA
LSTSMIVNSDVTSPEAPTASLSSSAASKESPTSPVNGDEVAERLGIAGHQSPSRYTTKEGECSVESCLNQFTALELMTGS
NKVVCEACTAREKKNQENPSKMICTSSTKQYLISQVPPILILHLKRFQTQRVGFRKVFKHVSFPILLDLAPVCKGHKKPR
IYSLYGVVEHSGTVHGGHYVAYVKTRLPLPQDDPRWNFLPKDKDPKPDNESSNLSSDSEEEAASAKASSVVEAPPGRWYY
VSDSRVSEVDENTVLKSQAYLLFYERIL
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 16
KEGG     K11844     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50271  ZF_UBP; Zinc finger UBP-type profile.     
CoilsCoil
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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