| Species |
Linepithema humile |
| Gene | LH18722 |
|---|
| Position | scf7180001004956:31408..38210[GBrowse] |
|---|
| Ant Genomes Portal | http://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18722 |
|---|
| sequence |
mRNA:
>LH18722-RA
TACGTATATTTTACTGCGGTTGGTTGCGTTATCGCAACTTTAATGCCGCAATTTTTCGATTTGATAAAGCCACTGAATCA
AAGCAGACCTGTGATACTTCTGTACCCAGCGGAATACTTTGTCGATGTAAACAACAACTTTACTTATATTTTTATGCACA
TGACAATAGCACTTCAATTCGCTTTGCTGGTATTAATCGCGGCGGATAGTATGTTCATTTGTTACACTGAATATGCCAAT
GGACTTTTTGCTATTATCGGCTTTGTGAAGCTCCTTGAATCTACTTACACGGTGCCTTTTGCGATTACATTGGGACTAAA
TACGATTATCATGAGTTGTACTTTGCTACAATGGACGAAACATCATAAAATTAACATCACTCTACCGGGTGTGCTAATTC
TTGTTTCGTTTTATCGTATACTGCACAACCTTCAAATGCCGCACGATAAGAAAGCTATGCGACGAAGTCGATCTCGAGAT
CGCGATCGGGAACGCGAACGAGAGCGACGTGATCGGCGACGCAGCAGGAGTCGATCGAAAGACCGCAAGAAGGATAGGAA
GCGATCCAGATCTAGAGAACGATCGCGAGAACGGGATAGATCACGGGAACGGGACAGATCACGAGAGAGAGATCGGGAAC
GTCGAGACATCAAGGACAGATCCAAGGACGACAAGAAACGCAAAAGCAGCCCTACGCTTGCTAATGAGGATGATTCAAAG
AAGGAATCGAAGAACGATGTTAGAAAAGAAGAGGAGGCGGAAGAGAAAGCGAAATCGGCACCAAAGAAGGAACCATTGAG
CCTAGAGGAACTGCTATCCAAGAAGAAGGCTGAGGAAGAGGCTCGAGCTAAGCCAAAGTTTCTCACCAAGGAAGAACGGA
CAGCTTTGGCATTGGAGAAACGTCAGCAGGAAGTTGATGCAATAAGGAAGCAGCAAGAAGAGGAGCGCAAGTCACTGTTT
CATAACGATAACACTTCTAAGGAAAGAGAATGGGATGACAGAGACAGTAGAAGGAGAGAGGGACAGCGTTCTCGCGAAGA
AGATATTAAAGACAAGGATAAAGAGAAGGAAGTGGAAGCTATCAAGGAACGATATCTAGGACTAATAAAGAAAAAGCGAC
GAGTTCGAAGGCTAAACGATCGAAAGTTTGTCTTTGATTGGGACACTTCGGAGGATACTTCTGTGGATTACAACAACATT
TACAAGGAGAGGCATCAAGTGCAGTTCTTTGGTAGAGGCAATCTAGCTGGCATCGACATTAAGGCGCAGAAACGAGATCA
AAGCAAATTTTATGGCGAACTGTTGGAAAAGAGACGTACTGAAGCTGAGAAAGAACAAGAAAAAATGAGATTGAAAAAAG
TGAAGCGGAAGGAGGAAAAGCAGAAGTGGGACGACCGGCATTGGTCCGAAAAGGCGCTGAACGAAATGACCGAGCGCGAT
TGGCGTATCTTTAGGGAAGATTACAATATCACCATAAAAGGTGGCCGCATTCCCGATCCTATCCGTTCCTGGAAGGAATC
CGGTTTTCCAAAGGAGATTTTGGACATTATCGACAAAGTGGGCTACAAGGATCTCACACCTATTCAGCGGCAGGCAATTC
CTATTGGCCTGCAGAATCGCGACATTATTGGCGTCGCCGAGACTGGTTCGGGAAAAACTTTAGCCTTCCTGATTCCATTA
CTGTTGTGGATCACCAGTCTGCCGAAAATCGAAAGACTCGAAGAGGCAGACCAAGGACCATACAGTATTATCTTAGCGCC
CACACGTGAGTTGGCACAACAAATAGAGGAAGAAACCAACAAATTCGGCCAACCGTTGGGCATCCGAACCGTTGTAGTAG
TAGGTGGTCTTTCGAGGGAGGAGCAAGGTTTCAGATTACGGATGGGTTGCGAGATTGTCATTGCTACACCCGGACGATTG
ATAGATGTTTTGGAAAATCGTTATCTTGTGCTGAATCAGTGCACTTATATTGTACTGGATGAAGCGGACAGGATGATAGA
TATGGGTTTCGAACCAGACGTTCAAAAAATTCTGGAATACATGCCTGTGACGAATTTGAAACCAGATAACGAAGACGCAG
AAAACGAGGAGAAGCTCTTAGCTAACTATAATACGAAGAAGAAATACAGACAAACAGTGATGTTTACCGCCACAATGCCG
CCGGCTGTGGAGAGGCTTGCCAGAACTTACCTGAGAAGACCAGCTGTGGTGTACATCGGCAGCGTAGGCAAACCGACAGA
ACGCACCGAGCAAATAGTTCACATAATGGGTGAAGCCGATAAGCGGAAGAAACTCATGGAGATACTTAGCAGAGGTGTCG
AGCCGCCCGTTATCATATTCGTCAACCAGAAGAAGGGCGCGGACGTTTTGGCGAGAGGCTTGGAAAAATTGGGATACAAT
GCCTGTACTCTTCACGGTGGCAAAGGCCAGGAACAGCGAGAGTACGCCTTGGCATCGCTCAAGAGCGGTAGCAAGGACAT
CCTGGTGGCCACTGACGTCGCAGGTCGTGGTATCGACATCAAGGATGTGTCAATGGTTATTAATTATGACATGGCTAAAA
CCATCGAAGATTACACACACAGGATTGGTCGTACCGGTCGCGCTGGGAAAGCTGGTCTTGCCATTTCTTTCTGCACTAAG
GATGACAGCCACTTGTTTTATGATCTCAAGCAGACCATTCTCGCCAGTCCGATATCGACCTGTCCACCGGAATTGCTCAA
TCATCCAGACGCCCAGCATAAACCCGGAACAGTGGTCACGAAAAAACGAAGAGAAGAGAAAATCTTCGCTTAA
PEP:
>LH18722-PA
MPQFFDLIKPLNQSRPVILLYPAEYFVDVNNNFTYIFMHMTIALQFALLVLIAADSMFICYTEYANGLFAIIGFVKLLES
TYTVPFAITLGLNTIIMSCTLLQWTKHHKINITLPGVLILVSFYRILHNLQMPHDKKAMRRSRSRDRDRERERERRDRRR
SRSRSKDRKKDRKRSRSRERSRERDRSRERDRSRERDRERRDIKDRSKDDKKRKSSPTLANEDDSKKESKNDVRKEEEAE
EKAKSAPKKEPLSLEELLSKKKAEEEARAKPKFLTKEERTALALEKRQQEVDAIRKQQEEERKSLFHNDNTSKEREWDDR
DSRRREGQRSREEDIKDKDKEKEVEAIKERYLGLIKKKRRVRRLNDRKFVFDWDTSEDTSVDYNNIYKERHQVQFFGRGN
LAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKG
GRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLE
EADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQC
TYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRP
AVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQRE
YALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTIL
ASPISTCPPELLNHPDAQHKPGTVVTKKRREEKIFA
|
| Swiss-Prot | Probable ATP-dependent RNA helicase DDX23 |
|---|
| KEGG | K12858 DDX23, PRP28; ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13] |
|---|
| SUPERFAMILY | SSF52540 P-loop containing nucleoside triphosphate hydrolases superfamily |
|---|
| Gene3D | G3DSA:3.40.50.300 |
|---|
| Pfam | PF00270 DEAD; DEAD/DEAH box helicase |
|---|
| SMART | SM00490 |
|---|
| ProSiteProfiles | PS51194 HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile. |
|---|
| Coils | Coil |
|---|
| ProSitePatterns | PS00039 DEAD_ATP_HELICASE; DEAD-box subfamily ATP-dependent helicases signature. |
|---|
| Ortholog | iGroup-00119 Probable ATP-dependent RNA helicase DDX23 |
|---|
