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Gene detail [Fasta]

Species Linepithema humile
GeneLH17342
Positionscf7180001004926:3297016..3302690[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17342
sequence mRNA: 
>LH17342-RA
ATGTCGCGGAGCTCGGAGAAGCTTCGCTTTGTACGCCGAGTCTTCGAGTGGAAGAAGAGGAATAGTGGTGCGATTCTGCT
CGTGGTGTGCCTGTTTGCGCTGACCACGTCGTTGCCAATCGCTTATGCGAATACCGAGCAGATCCATGTCCCAACGGGCA
TGAATCGTTGTCCAGTCGAGTGCGCTTGTCTCGGCAATTTGGTCTCCTGTAGCGACCTGCAGTTGATCGAGGTACCGAGT
GGGCTGCCTCCGTGGACAGAGATTCTAGAATTGATGGGTAATAATATTGCAAACTTAGAATTTGACTCATTACTTCATTT
AACAAAACTCAAAAAACTAGATGTAAGTGCTAATAAACTCAGAGATAATTTTACTATTGTCTTGTCAAACGTTGCACAAT
TACGCGAGCTTAAAGTGAATAAAAATCACTTGACACAAGTGCCAGATCTTGTATTTGTTAAGAATATTACTCATCTCACA
CTGTCTCATAACTTAATTTCCAATATAAATGGAACTGCATTGCTCAGTTTGCCACAGCTTCAATCTCTGGATCTCAGTGG
GAATAAAATAAGTGTCCTTAAAAAAAGGTCCTTCCTTGCTCCTAACGAGCTTACACATTTAAATTTAAATGGAAATCACT
TAAATGTTATTGAAAATGGAAGTTTGGATAATCTAACTTTGCTGGAGGAACTTCGTTTGAATAAAAACAATTTGACACAA
CTGAAAGATCTATTTATGAATCAGAAAAAATTACGAATACTAGAGGTGAACAGAAATAATCTGCAGCAAATTCACGGATT
AAGTCTGAAAAGTTTACAAAGCTTGAAACAGTTACACTTAAAGAGGAATAGAATTAACACGCTGGATGACGGAGCTTTTT
GGCCACTTAAAGATTTAGAACTATTAGAGCTCGATTTTAATATGCTGACCACTATAAAGAAGGGTGGTTTGTTCGGCTTA
GAAAATCTGCAAAAGTTTACCTTGTCGCACAATAAGATTTCGACGATCGAGCCTCAGGCGTGGGATATATGCAAAGAAAT
AACAGAGATAGATTTGTCGCATAATGACTTGACCTCTATAGAACGGGGCTCATTCGAATATCTCACGAAGCTGGAAATAC
TTAAACTGGATCATAACCAGATCGCATACATCTCGGACGGAGCGTTCAATTTTACACCAAATCTTCGTGTCCTGGAACTT
AATTTCAATAAGATATCCTACATGGTAGAGGATATCAGCGGTGTGTTTTCACCGCTCAGTCAGTTGTCGAAATTGGGTCT
GGCGCACAACAAGATGAAATCTCTAAATCAGAACGCCTTTGCCGGCTTGAGTCGCGTCACCGAGCTCGACTTGATCGGAA
ATAATGTTACGTCCATTCAGGAAAATGCGTTTCTGCCGATGACCAGCCTGATCAAACTTAAGATAAACACATGTGAGTTT
GAATTGTGCATAAGGAACTTGGTTTGCGATTGCGGACTTCAATGGCTGAGCATGTGGTTGCGAGAACATCGTTACAATGA
AGCTGAGCTGTACTGCGGTTATCCGCAATGGTTGCAGGGCATGTCATTGATGCATTTGCATCATGCGAACTTCACTTGTA
ACGAATATCCAAAACCACTGATCATCGAAGAACCGAAGGGTCAATTAAGCACTAAAGGTGGCAACGTGACGCTGGTGTGT
CGCGCGACCAGCACCGCTGACGCACCGCTTTATTTCACGTGGAAACATGACAATGTGGAGTTAATTGATGCGAATCTGCA
GACCAGCTCCGGGTCTACCGAGGACGGAGCAACCGAGGCTACATCTTTTTTACACCTTATTAACGTCACTTATGCTGATG
CGGGAAAGTATCAATGTACGGTAGCAAATAATTATGGAACTACGTATTCGTCCAAAGCCAAACTAAGTGTGTTGGTTTAT
CCGACATTCTCTAAAATTCCGCACGATATACGAGTGCATGCCGGGAGTACCGCTCGTTTGGAATGCTCTGCCGACGGACA
CCCGTCTCCTCAAATAGCTTGGCAAAAGGATGGTGGAAATGATTTTCCGGCCGCGAGAGAAAGGAGGATGCATATGATGC
CGACGGACGACGTGCTCTTTATTATAAACGTGAAAATGGCCGACAGCGGAATTTATTCTTGCACCGCGCAAAACATGGCT
GGTCTTATCATTGCAAACGCTACGCTCACCGTTTTGGAAATACCATCCTTCGTAAAACCTATGGAGAACAAGGAAATAAT
GGTGGGCGGCTCGATCGTGCTCGAATGTATGGCCAACGGTGCCCCACGCCCGAAATTATCGTGGCGAAAGAACGGCAGCC
CGTTGGAGCCAACTGAACGGCACTTTTTCACCGCCGAGAATCAACTGTTGATTATCGTCAACACGATCGCGAGTGACGCC
GGCAGTTACGAGTGCGAGATGAGCAATTCGTTGGGTAGCGTCGTCGGCGCGTCGTATCTCACAGTTAATCCAGCCTCGAC
TTCCGTACTGAACGACTCCGAAATACTAGGCGTGATAATAATAACCGTCGTGTGTTGCGCCATTATTACTTCCGTGATCT
GGGTGGTCGTAATTTACAAGACCAGACGGCGCCTGAATTCCGCTCAAGACACTGCCGTCGCGCAACCGGCGACGACCGTT
ATACTGACCGTTCCGGACGCACAAACGCAATTGTATTTGGACACGAGCTCGCAGCATAGCAAAGACAGCGGGACCGGAGA
CAGCACTAATCCCAGTAACGATCAGCTGCAAATGTGCTTGCCCGAGGAGATCGTGACTAGCTCTGCCACCGAGCACAACG
AAGAAGAATTGGGAACGATAAGCGTTGGCGATCCTCTCTTGCGCTACACGAATCACGAGCGGCATGCGAGCGAGAACGCC
GACAGCATGGTTTGA
PEP: 
>LH17342-PA
MSRSSEKLRFVRRVFEWKKRNSGAILLVVCLFALTTSLPIAYANTEQIHVPTGMNRCPVECACLGNLVSCSDLQLIEVPS
GLPPWTEILELMGNNIANLEFDSLLHLTKLKKLDVSANKLRDNFTIVLSNVAQLRELKVNKNHLTQVPDLVFVKNITHLT
LSHNLISNINGTALLSLPQLQSLDLSGNKISVLKKRSFLAPNELTHLNLNGNHLNVIENGSLDNLTLLEELRLNKNNLTQ
LKDLFMNQKKLRILEVNRNNLQQIHGLSLKSLQSLKQLHLKRNRINTLDDGAFWPLKDLELLELDFNMLTTIKKGGLFGL
ENLQKFTLSHNKISTIEPQAWDICKEITEIDLSHNDLTSIERGSFEYLTKLEILKLDHNQIAYISDGAFNFTPNLRVLEL
NFNKISYMVEDISGVFSPLSQLSKLGLAHNKMKSLNQNAFAGLSRVTELDLIGNNVTSIQENAFLPMTSLIKLKINTCEF
ELCIRNLVCDCGLQWLSMWLREHRYNEAELYCGYPQWLQGMSLMHLHHANFTCNEYPKPLIIEEPKGQLSTKGGNVTLVC
RATSTADAPLYFTWKHDNVELIDANLQTSSGSTEDGATEATSFLHLINVTYADAGKYQCTVANNYGTTYSSKAKLSVLVY
PTFSKIPHDIRVHAGSTARLECSADGHPSPQIAWQKDGGNDFPAARERRMHMMPTDDVLFIINVKMADSGIYSCTAQNMA
GLIIANATLTVLEIPSFVKPMENKEIMVGGSIVLECMANGAPRPKLSWRKNGSPLEPTERHFFTAENQLLIIVNTIASDA
GSYECEMSNSLGSVVGASYLTVNPASTSVLNDSEILGVIIITVVCCAIITSVIWVVVIYKTRRRLNSAQDTAVAQPATTV
ILTVPDAQTQLYLDTSSQHSKDSGTGDSTNPSNDQLQMCLPEEIVTSSATEHNEEELGTISVGDPLLRYTNHERHASENA
DSMV
Swiss-ProtLeucine-rich repeats and immunoglobulin-like domains protein 3
SUPERFAMILYSSF52058  L domain-like superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF07679  I-set; Immunoglobulin I-set domain     
SMARTSM00082     
ProSiteProfilesPS50835  IG_LIKE; Ig-like domain profile.     
CoilsCoil

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