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Gene detail [Fasta]

Species Linepithema humile
GeneLH17341
Positionscf7180001004926:3359331..3362247[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17341
sequence mRNA: 
>LH17341-RA
ATGACCGATTCTGTGGAATGGGGTGTTTCTGAAAATGGAGAAAAGGATGATGATTGGAAGGCGGATTACTCAGAAGAAGA
GACACAAGAAGATTGGCTTCAATCCATTTTGCCCAAAGAAAAGAGGAATATAAGTTCACCATGTGTGGTTGAAATGTTGT
CAGATGATATTAATTCGCTAAGTCTACCAGGGATATTGCAGTCTGAACAAACAGCAAGATCAGACAAAGAAACATTTTAT
GGCATTGACTTTGGAGCAGACGCATTACCTAATAAGAAAGATACATCTGTAATAATTGCTAAAGCTATTAATCCTAGATG
CGATACTCATATACAAACTAATAATGAACAACAGGCATTGCCTGTAGTATTGAGTACAGAGGACAAAAGTAACAAAAACA
AAGATACCAGTAGTCGTAAATCAAAAGATGTTTGTGACAATGTTAATGATGCGAGCAGTTCTAATAGAAGTACTCCACGT
AAACAACGCAAAAAGAAAAAGCGTAAAAATTCGACAAATTGCAATGATGATGCAACAGCACAGGGCAGTTTTCAACATGA
TGATGTCAGCACACTTCAACAAGAGATCGATCTACCTGAATATATCGAATACATGCGCGCATTTCGACGAGAAAATAGGA
CACCTCGATATCAAATTATTAGCGCATCTCAATCCAAATATACCGCACCTCCAAACGAGTTTGTCAACGTTTCTCACCAT
ATGTGTAATAAAAAATCACCAGAAATTTATTGCATAAGAAATACAGTTATTGTTATAATGGAGAAGGAAAGTGGATTCTG
TTTCAACGGCAAATTGTTGGTGAAAGTATTATACGGTGCTGTGAAAATTTATGGATTCGTGCTCAACAATTCGGCCGATG
CTACAAAAGTGTACTCACCGAGAGGATACAATCACGTCGCTATAGAAAATACCGGGACATCTTCGGAAGGTAGCATCGAA
GATATCTGGACCGCACTCGCCGCGAAAGGTATCACCCGAGATTCGGAGAGCAAACTGCAAATCGACGTCGATAATGTTCA
ACCGGGAATGGCCGTTCTCGCGTTGCAAAACTTCGAGAACAACCTGACGCTCTTCCTACAAACTTACTTTCCACATTTCA
GATTATTTCCGAGCATAAAAAATCCTCACTACTATCCTTGGACAGATCCCAGACGAGCCGAAGTAATATTACAAGCAAAT
TTGTATTTCTCGCAACACGACGAATTTAAGTATAAAAGATTATTCTTTGATTCGTACCTCGCCGAGGACATCGCGGAGAG
AATGTTGAGTCGCTGGTACGAAAACGAATGGTCCTGCACGATGGTCATGGGCGGCAAAGGCGTCGGCAAGTCCACGAACG
TGCGGTATCTCATCAACAGTCTGTTGCGCACAACCAAGGTGGTCCTGGTGGACGTGGATCCCGGTCAAGCAGAGTGCACA
CCGGCCAGCTGCATCTCGTACAGCTTGATCGAAGAGCCTCTTATGGGGCCGAATTTCACGCATTTAAAAACGCCCGTTTA
TCAATTGTTCCTCGATGAGGTAAACATTGCTTCGTGCGTCATACGCTACCTGGAAGGCATCAAGATGCTGATAGAACGAC
TGAAGGGATGCCCCGTACTGTCTTGCTTGCCTATCGTGGTGAACACTATGGGCTTCGTGCGGAATCTCGGCTGGGACATC
GCGATCTTCACGATAAAGCTGATTAGACCGTCGTTCATCCTACAAATTAAATCGTCAACAAAACAATATAATTACAAAGA
ATATCTCAGTGCAGAAGTTGTAAATAAACAGGAATGCTCTACATGGACGTTTTGCGACGAGACATTCCTCGACTGGAATA
GACCGTGCGAGCACGATGTGCACGTAATTCCTTCCCAGGTGGATATTCCTCGACGGCAGAATAGAGACAGGCGCAATGAA
GGAATGTGGAACATGGAGCCGTATCAGCAACGTGAACTTGCGATGATGTCCTATCTCAGCGATATCATACGCGAAAACGA
TGATTCTTTGGCATCTTTTTCATCTCTGTGTATTATTCCCAAACGATTGTTCGGTGTACCGCCCTCGCATGCTTTGAACG
TTATAAACGGCAATATCGTAGCACTGTGCGGTGTGGATTTAACGGAGGAGTCTTCTCAGGAATCTAATGCCATCTTTACT
CTTCGAATCCTGACGCAGAGGTCATCTCTATGTACATGCTACGGCTTTGGAATAATCCGAGGTATCGATATGAAACAGCA
GGAAGTGTTCATAAACACTCCACTGCCAATATCGATTATGCAACATGTTAACTGCTTAGCGGGCTGTATTCCTGTTCCGC
CCGCACTGCTGCAGTTACACCATCGCGCACCTTACGTCGGCGCCAACGCAGGTTTACCAACAAGTCGCGAGTCCCAGAGA
GGGGGATGCATAGCGAAGATGCATAAAAAAAAGTCGGATAAAAGTCCTAATAAAACAGTTCCCAAGTCCTAA
PEP: 
>LH17341-PA
MTDSVEWGVSENGEKDDDWKADYSEEETQEDWLQSILPKEKRNISSPCVVEMLSDDINSLSLPGILQSEQTARSDKETFY
GIDFGADALPNKKDTSVIIAKAINPRCDTHIQTNNEQQALPVVLSTEDKSNKNKDTSSRKSKDVCDNVNDASSSNRSTPR
KQRKKKKRKNSTNCNDDATAQGSFQHDDVSTLQQEIDLPEYIEYMRAFRRENRTPRYQIISASQSKYTAPPNEFVNVSHH
MCNKKSPEIYCIRNTVIVIMEKESGFCFNGKLLVKVLYGAVKIYGFVLNNSADATKVYSPRGYNHVAIENTGTSSEGSIE
DIWTALAAKGITRDSESKLQIDVDNVQPGMAVLALQNFENNLTLFLQTYFPHFRLFPSIKNPHYYPWTDPRRAEVILQAN
LYFSQHDEFKYKRLFFDSYLAEDIAERMLSRWYENEWSCTMVMGGKGVGKSTNVRYLINSLLRTTKVVLVDVDPGQAECT
PASCISYSLIEEPLMGPNFTHLKTPVYQLFLDEVNIASCVIRYLEGIKMLIERLKGCPVLSCLPIVVNTMGFVRNLGWDI
AIFTIKLIRPSFILQIKSSTKQYNYKEYLSAEVVNKQECSTWTFCDETFLDWNRPCEHDVHVIPSQVDIPRRQNRDRRNE
GMWNMEPYQQRELAMMSYLSDIIRENDDSLASFSSLCIIPKRLFGVPPSHALNVINGNIVALCGVDLTEESSQESNAIFT
LRILTQRSSLCTCYGFGIIRGIDMKQQEVFINTPLPISIMQHVNCLAGCIPVPPALLQLHHRAPYVGANAGLPTSRESQR
GGCIAKMHKKKSDKSPNKTVPKS
Swiss-ProtPolynucleotide 5'-hydroxyl-kinase NOL9
KEGG     K06947     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF06807  Clp1; Pre-mRNA cleavage complex II protein Clp1     
OrthologiGroup-00843    Polynucleotide 5'-hydroxyl-kinase NOL9      

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