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Gene detail [Fasta]

Species Linepithema humile
GeneLH17312
Positionscf7180001004926:2906141..2908522[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17312
sequence mRNA: 
>LH17312-RA
ATGGCAATGGTGGAAGAGTGGGGAAACGATGATGTGGATTTTTCGCAGTCATTGAATACATCTATGTTTGAGGAAGGTCA
TGCTCCAAGTCGCGGCAAAGGACGTGGCACGATTCTATACGACAATGACTCAATTCGACATGTGGGAGGAAACCAATCCT
ACAATGAAAAAACGGACGACCACCAGGAAAATTATGACGATAATACTCAGAATGAAGATTACGAGAATAATAGATATAAT
GGTAATAACGGCAATAGATTTGGAGGAAACAGTAGGCGACAAGGCAATGATAAGCCACGTTACGGAAATAACAGAGGTGA
CGATGATGGAAATGATCGCAAGTGGCAAGGCAACAGAGATAGAAACGATAGTAGACGAAACAGGAACGACAACGGCGAAA
CTGAGGACAATGGGTACGGCGGAAATTACCAGAACGATAAAAGGGACAGGCCAAGGAGAGATAGAGATGATAATAGAGGT
GAAAGAGGTGAAAGAGGTGGAAGAGGTGGTTATGGTAGAAACAGGGGTAACGGCGATAGCGGTGGTTACAATGAAAACGA
CAATGAAGACAGAGGAGGACGCAGAAGGAACGGCGGTAATTTTAAAGAAGACAACGACGAAGGTGAACCAAAAAAAAGAG
AGATTTACATTCCGCCGGAGCAACCTGATGACGAAAATTCCCTGTTTGGAAATGACGTGTCGATGGGAATAAACTTTGAT
AGATATGATGACATTGAGGTAAAAGTAACTGGTGAGAATGCACCACACCCAATACGTGTTTTTGATGAAGCCGGTTTGAG
AAGTATCCTGGTGGAAAATATTAAGAAATCGGGCTATAAAAAGCCTACTCCTGTCCAGAAATACGCCATTCCAATTATAA
TGAACGGTCGTGATTTAATGGCTTGCGCACAAACAGGTTCTGGTAAAACTGCAGCATTCGTAGTTCCTATTATACACACT
CTATTGGAAAATCCTACAGATTTAATTAAAACGTCTACTTCCTGCGAACCACAAGTAATTATTGTATCGCCTACACGTGA
GCTTACCCGACAGATTTATGAACAAGCTAAGAAATTTAGTTTAGGCTCAATCTTGCGTGTTGAAATGGCTTACGGAGGAA
CATCATGTAATCATCAAACAAATAAGATTCTTCAAGGTTGCCATATTCTAGTCGCCACTCCAGGCAGATTGTTGGATTTT
ATTGGAAGAGATAAGGTCAAACTCTCTTCTTTGCGATTCTTTGTATTGGATGAGGCAGATCGAATGCTAGATATGGGCTT
TCTACCTGATATCGAAAAGATTGTGGACCATGAAACAATGGCACCTGTAGAAAATAGACAGACACTTATGTTCTCTGCCA
CTTTCCCGTGTGAAATACAAGAATTGGCAAGTCGATTTTTGCGCAACTACTTATTCCTCGCAGTTGGAATTGTGGGTGGT
GCGTGCGCTGATGTAGAACAGAACTTCTATCAAGCATCTGGCCAGTCTGAGAAACGAAAATTGTTGAAAGAACTGATGGA
GAAACAAAATCAGATGGGAAGTCTCGAAGGTACTTTAGTATTTGTCGAGCAGAAGAGACATACAGACTTTATTGCTGCTT
TCTTGTCCGAAAGTAACTTTCCGACGACTAGTATACACGGCGACAGATTGCAGAGAGAACGAGAAGAAGCTTTGGCCGAT
TTTAAACGGGGCAAAATGTCAATCTTGGTAGCTACGGCAGTTGCCGCGCGAGGCTTGGATATTAAAAATGTTGCTCACGT
AATTAATTTCGATATGCCAAAAACGATCGATGAATATGTTCATAGAATTGGACGAACAGGCCGAGTAGGAAATCGTGGAA
AAGCAACTTCATTCTTTGATTTAAATACGGACATGCCTCTTACTGGCGATTTAGTTAAAATTTTGAAGCAAGCTAATCAA
CCAGTACCTGATTGGCTGGGATCTGGAGGCGGTAGCAGAACTTTCGCACCAGGAAGATTCAACAAGTTCGGCGGAGAAGA
TATCAGAGGAAGTAATAACGCATATGGTGAAACATATGATGTCATTGGTTCTGCGCCTCCTGTACAAGAAGAACCAGAGG
AAATGTGGTAG
PEP: 
>LH17312-PA
MAMVEEWGNDDVDFSQSLNTSMFEEGHAPSRGKGRGTILYDNDSIRHVGGNQSYNEKTDDHQENYDDNTQNEDYENNRYN
GNNGNRFGGNSRRQGNDKPRYGNNRGDDDGNDRKWQGNRDRNDSRRNRNDNGETEDNGYGGNYQNDKRDRPRRDRDDNRG
ERGERGGRGGYGRNRGNGDSGGYNENDNEDRGGRRRNGGNFKEDNDEGEPKKREIYIPPEQPDDENSLFGNDVSMGINFD
RYDDIEVKVTGENAPHPIRVFDEAGLRSILVENIKKSGYKKPTPVQKYAIPIIMNGRDLMACAQTGSGKTAAFVVPIIHT
LLENPTDLIKTSTSCEPQVIIVSPTRELTRQIYEQAKKFSLGSILRVEMAYGGTSCNHQTNKILQGCHILVATPGRLLDF
IGRDKVKLSSLRFFVLDEADRMLDMGFLPDIEKIVDHETMAPVENRQTLMFSATFPCEIQELASRFLRNYLFLAVGIVGG
ACADVEQNFYQASGQSEKRKLLKELMEKQNQMGSLEGTLVFVEQKRHTDFIAAFLSESNFPTTSIHGDRLQREREEALAD
FKRGKMSILVATAVAARGLDIKNVAHVINFDMPKTIDEYVHRIGRTGRVGNRGKATSFFDLNTDMPLTGDLVKILKQANQ
PVPDWLGSGGGSRTFAPGRFNKFGGEDIRGSNNAYGETYDVIGSAPPVQEEPEEMW
Swiss-ProtATP-dependent RNA helicase vasa, isoform A
KEGG     K13982     
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00270  DEAD; DEAD/DEAH box helicase     
SMARTSM00487     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS00039  DEAD_ATP_HELICASE; DEAD-box subfamily ATP-dependent helicases signature.     
OrthologiGroup-00344    ATP-dependent RNA helicase vasa, isoform A      

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