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Gene detail [Fasta]

Species Linepithema humile
GeneLH17917
Positionscf7180001004934:3576695..3580584[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH17917
sequence mRNA: 
>LH17917-RA
ATGCCATTGATAAGGAAACCCATGCGATATGCTCATCAAGAAGGGCATACCGACGTTTGTTATTATTCTGGTGAAAAGAG
AGGTCTCATCACTTGTGGATGCGATGGAGATGTTAGATCTTGGTTAAATTTAATGGATGATGATCCAATCACTAGTTGCA
TCTCAGAACAAGCAATAACTGCCATTTCAAAGAATGGTAAAATTTTTGTAGGAAATGATAATAATACAGTGCAAATACTT
ACTTATCCAGATTTGGAGAAGGAAGGAATAGTTACTAGGTTTGCAGCACCAGTCTCAGCACTAGCAACGACGAAAGACAG
TAATTTAATAATATCTGGTTCTTGCGATATGCGGATACATGTTACAAACATCAATACATTAGATAGTATAGAATTAGAAG
GACATCAGGCACCCATTTTAGGTTTATCTTTGGATCCAAAAGAAGAATTTCTGGCATCTTCCGGTGCAGATGGATCTATT
CGAATATGGAACATTAAGGAAAAACAAACTGTACATGTTTGGAATAATATTGTGCCAAAATGTAACTCTTTTTTCACAGC
AAAATCATATTCTACACCTTCTTTTAAGTGTACTGATGGTAGTTGCCTGGCATATCCATGTAACAAAGATATAGTTGTAG
TAGAAAGATCATCCTGGAAGGAATTGTACAGATTGAAATGTCCTACCTTGAGGACTGAACTCAACATTTGTAAATTTTCT
GAATGTGGTACACGTATTGCCGCTAGTTCACTGCATGGAGAGATAGTTGTTTGGAATGTAGAAACTAAAGAAGTAATTGG
ATATCTTGAACATGAACAAGATTCCAAAATCACAGCATTAGTATGGCACATAGATCATTCCGACGAAATTGCATTCTGCG
ATGCGCTAGGAAAATTAGGATGTGTTGATGTGGTAAGTGCTGGTAAATCTGAGAATGAGAAAATTTTGAATTTTGAGAGA
AATGAAGATGTAATAGAAAATGGTATTGCTTTAACGGACGATGATGACGATGATATGGAAAATGTGATATCTTTGAATAA
AATTAAAGCCTCCGTCAATCTGGAAGATGATCAGAAGAGTCACTCCGATGCAGGCTCTGAAAAGGCTCTTTGTGATGCCA
AAGCTTTTATGCCTAATATAAAATTGCAATCATCTTTCCAACCAGGATCAACTCCCTCTCATTTATTATCGTATTTTATG
ATGTGGAATGATGTGGGAATGGTTAGGTGTTTTTCATCGGAGGATGGAGAAGAATGTAGCATTGAAGTGGAGTTCCATGA
TGTTACAGTTCATCGCAGCATGCATATAAGTAATTATTTGCGGCACTCTATGGCTGCCTTGTCTACTCAAGCACTAGCTT
TAAGCTGTGCATCTTCAGATGAGGGACCTAGCAAAGTTGTTGTGATAGCTCTGCAAGGTTGGGGTTCTGGAAACAAAGAA
TGGTCGCTGGAATTGCCAGAAGATGAAGAGAGTGAATGTTTGGCAGTTGGCGATAATTTTGTAGCAGTAGCAACATCTAG
GAGAAATTTAAGGATATTTATGATAGGTGGAACACAGCGTGAAATCTTAGCCCTGCCTGGACCTGTAGTTGCAATGAATG
GTTTAGGAAATCATCTTGTGATAGCTTATCATGCTGGAGTTGCATCGGATCTTATGTGGTTGGGATTATCCGATATTTAT
TCTCCTACTATAATGGATTCTGATGATGTCATCAGAATATACGATAAGAGATCTTGTCAATGGAGAGTGTGGTGCGATGC
GAATATACAGGACAAAGGTAAAGCGGATCATTACTTCGTAATCGGTGTGAGCGAACAAGAACGGAATATGCGTTGCATTC
TTTGCAAAGGCAGTTATTATCCACCGACAACTCCGCGTCCGATAATCACCGAAGTAAGTCTGTCTGCGCCTCTCTGCGAA
CCGAAATCTGAAAAAACGGAGAAGGAACGTAAGCTGTGGGAGATGGGAACCAATCCGTTGGATGAGACTGAGGCATTATT
AACTTTGATAGCACTTGCCTGCAGAAGCAATTTGGAATACCGTGCAGTGGATATATGCGAGCAAATCGCATCAACTAGAG
CAATAGATTTAGCCATACGATACGCCTTGCGCATAAATAAAATGGCATTGGCAAATAAACTGGAAACGATCGCTGATGCA
AAGTCGGATGCCAAAGATTCAAGGGAAGAAGTTACGGAAAATCATCAAGACACTTTTACAAACAACGATAATAATTCTAG
TATTAATAGTCAAGAAGAAGACAATGTGCCTTTACTATCTCTTAAAAAACCGGAAGTGGAGATTAAACCGTTGGTTATGA
GTCAGATATTAAAAAGAACAAATCCATTTTTAAAAGCCAGTAGTTCACCTTTATCACCAAGAGGTTTAGACGGCTTAAAC
ACTTTACCAGAGAAACCTCAAAAACCTGCATTAATTAAAACTGCACCTGTTAAATCAAAACCGAAGTCTGAGCCTAAGAA
AGAATCGTTCGTTAATTGGCACGCCAAAAATAAAAAGAGTTTGCAGGAAGAATTTCCCGAAATGAGTGCCGCCGAATTAA
TTAGAGTCGGATTGACACGATACAAAGAAGAGACAGCGGAGTCAAACTCAGATAACGCGAGTGGATCTTCAGAGCTTTCA
AAGAAACGAAAATTATCGGATTCGGAGAACGGAGACAGTAATGAAGTGAAGCGATCTATAAGCAGCAAACTCAGCGCGTT
TGCATATAACAAGTAA
PEP: 
>LH17917-PA
MPLIRKPMRYAHQEGHTDVCYYSGEKRGLITCGCDGDVRSWLNLMDDDPITSCISEQAITAISKNGKIFVGNDNNTVQIL
TYPDLEKEGIVTRFAAPVSALATTKDSNLIISGSCDMRIHVTNINTLDSIELEGHQAPILGLSLDPKEEFLASSGADGSI
RIWNIKEKQTVHVWNNIVPKCNSFFTAKSYSTPSFKCTDGSCLAYPCNKDIVVVERSSWKELYRLKCPTLRTELNICKFS
ECGTRIAASSLHGEIVVWNVETKEVIGYLEHEQDSKITALVWHIDHSDEIAFCDALGKLGCVDVVSAGKSENEKILNFER
NEDVIENGIALTDDDDDDMENVISLNKIKASVNLEDDQKSHSDAGSEKALCDAKAFMPNIKLQSSFQPGSTPSHLLSYFM
MWNDVGMVRCFSSEDGEECSIEVEFHDVTVHRSMHISNYLRHSMAALSTQALALSCASSDEGPSKVVVIALQGWGSGNKE
WSLELPEDEESECLAVGDNFVAVATSRRNLRIFMIGGTQREILALPGPVVAMNGLGNHLVIAYHAGVASDLMWLGLSDIY
SPTIMDSDDVIRIYDKRSCQWRVWCDANIQDKGKADHYFVIGVSEQERNMRCILCKGSYYPPTTPRPIITEVSLSAPLCE
PKSEKTEKERKLWEMGTNPLDETEALLTLIALACRSNLEYRAVDICEQIASTRAIDLAIRYALRINKMALANKLETIADA
KSDAKDSREEVTENHQDTFTNNDNNSSINSQEEDNVPLLSLKKPEVEIKPLVMSQILKRTNPFLKASSSPLSPRGLDGLN
TLPEKPQKPALIKTAPVKSKPKSEPKKESFVNWHAKNKKSLQEEFPEMSAAELIRVGLTRYKEETAESNSDNASGSSELS
KKRKLSDSENGDSNEVKRSISSKLSAFAYNK
Swiss-ProtWD repeat and HMG-box DNA-binding protein 1
KEGG     K11274     
SUPERFAMILYSSF82171  DPP6 N-terminal domain-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF12341  Mcl1_mid; Minichromosome loss protein, Mcl1, middle region     
SMARTSM00320     
ProSiteProfilesPS50082  WD_REPEATS_2; Trp-Asp (WD) repeats profile.     
CoilsCoil
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     
OrthologiGroup-00106    WD repeat and HMG-box DNA-binding protein     

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