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Gene detail [Fasta]

Species Linepithema humile
GeneLH15147
Positionscf7180001004854:90802..94700[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH15147
sequence mRNA:
>LH15147-RA
ATGAGCGCGCCGCAGGCACCAGCGAAATTGAGAAATGGAGTGGTGAAGCAGGTGACGTCTGGAGACACTGTTGTTATTCG
TGGACAGCCCATGGGAGGACCTCCACCCGAAGTGACTATTACTCTATGCAACATTACTGCTCCAAAATTAGAACGCTGGA
AAGGAAATGATAGCATGGATGAGACCAAAGATGAACCATATGCTTGGGAAGCGAGGGAATTCTTACGCAGGAAGTTGATT
GGTCAAGATGTCACATTTGCCACTGAGAAGTCGGTTAATACAGCCAGAACGTATGGAACTGTTTGGCTGGGAAAAGATAG
AAATGACGAGAACGTAATTGAAACTTTGGTGTCGGAGGGTTTGGTGAATGTCAAAAGGGACAATCGTAATCCTACAGCTG
AGCAACAACGATTGATTGAGCTGGAAAATATTGCGAAAGCTGCGAAGAAGGGAAAGTGGGGTGACTCACCAACCTCGGAG
CATATACGGGATATTAAATGGACCGTCGATGATCCTCGGAAATTGGTTGAGAAGTTCAGCAAGAAACCAATTAAAGCCGT
AATCGAATTCGTCTTCGACGGCTCCACTGTGAGGGCTTTCCTCTTGCCCGACTTCTACAACATAACATTGATGATCTCAG
GCGTTCGTTGTCCTGGCTGGCCCAACGGGCGCCGCGAGAATTCCGTCGGTGATCCTTATGCAGACGAAGCCAGATACTTT
GTGGAATCGCGACTCTTGCACAGAGACGTTGAGATAGTGTTGGAATCGGTCAACAATAACAACTTCATTGGTAGTGTCAT
TCATCCAAAAGGAAATATTGCTGAAATTTTGCTGAGCGAGGGTTTCGCAAAATGTCAAGATTGGTCAATCAGTAATAGCA
GATCGGGCGCGGAAAAACTGTATCTCGCTGAGAAAGCGGCGAAGGAAGCGCGTTTGCGTCTGTGGAAAGACTACAAACCG
TCCGGTCCGCAGATCGAATTCACCGGCACGGTCGTGGAAATTATTAACGCGGACGCGCTCATCATTCGCACGCAGAACGG
CGAGAACAAAAAAGTATTTCTTAGTAGTATTCGACCGCCCACTCGTGAGAAGAAGAACATCGAGGACAGCAACAATACTG
CTCGACCGAAGGATTTCAGACCTCTTTACGACATACCTTGGATGTTGGAAGCGCGAGAATTTTTGCGCGAGAAGTTCATC
AGGAAAAACGTAAAAGTGGTGGTTGATTATACGCAACCGGCTAGGGACAACTTCCCGGAAAAGCTGTGTTGCACTGTAAC
GTGCGGCAAAACGAATATCGCGGAGGCGTTGGTCGCTCGGGGTCTCGCGCGAGTGATCAAATACAGGCAGAACGACGATC
AGCGTTCTTCTCACTACAATCTCCTGCAAGTCGCGGAGAGCAAAGCGGAAAAATCGCAGCACGGACTGCATGCGAAGAAA
GACATTCCAGTTCACAGAATAGTGGATCTCTCGAACGATCCCTCTAAGGCGAAAGCGTTCCTGACATCGCTCAAACGAGC
GCAGGGAATCAGAGGAGTCGTCGAATTCGTGACAAGTGGCTCACGTCTGAAGCTCTACCTTCCCAAGGAAGATTACGTTA
TCACGTTCGTATTGGCTGGAATACGAACCCCGCGCTGCCAGAGAACATTGCCCGGCGGCGGAGTGTTGAAAGCCGACGAA
TACGGTGAGAAAGCTCTAGCCTTCACCAAGGAGCATTGTTTCCAACGAGACGTGGAGATCAAGATCGAGAATACGGAAAC
GAAGTCGAGCGGTTTCATCGGCTGGTTAACAGTGAACGACGTCAACATGTCCGTCGCTCTGGTTGAGGAAGGTCTGGCTG
AAGTCGTGAATTTCCCGGATTCCGGAGAACTCACGAGAACCCTCAAGGCTGCGGAAGAACGTGCGAGAGCGAAAAAACTT
AATGTTTGGAAGAATCGCGTGGAAGCGCCAGTGGAGAGCGACAAGATCGTTGACGAGAAGGAAGGACAGGAGCGCAAGAT
CGATTATCAGAAGGTCGTGATCTCCGAGGTCACCGACGATCTTCATTTCTACGCCCAATCTGTCGATCAGGGCACTATGC
TGGAGAACATGCTTCTGCAACTGCGCCAGGAGCTGGTTGCGAATCCGCCACTTCCTGGCGCTTACAAGCCGACGAGGGGC
GATTTAGCGGTTGCAAAATTCAGCGGCGATGATCAGTGGTATCGCGTGAAAACGGAGAAGGTCTCCGGGACCAACGTCAG
CGTATTCTACATTGATTACGGCAACAGGGAGACGCTTAATGTCACGCGAGTCGCTGATTTACCGGCGCGTTTCGCGACTG
ACAAGCCGTACGCTCATGAGTACGCACTGGCATGCGTGACTCTTCCGAGTGACACTGATGACAAGAGAGCGGCGGTGGAT
GCTTTTAAGGAAGATGTGCTGGATAAAATCCTGCTGTTAAACGTCGAATACAAGTTGAGCAGTAACGTAATTGCCGTATC
GTTGATGCACCCCACCTCAAACGAAGATATCGGAAAAGGACTTATCTCCGACGGTTTCCTGCACGTTCAGAAGCATCGAG
ATAGGAGACTCACTAAACTGATTGAGGAATATAAAAAAGCCGAGGAAGACGCGAAGCACAACCATCGTAATATCTGGATG
TACGGAGACGTAAGGCCGGAAGACGATGACAAAGAATTTGGGTTGTAA
PEP:
>LH15147-PA
MSAPQAPAKLRNGVVKQVTSGDTVVIRGQPMGGPPPEVTITLCNITAPKLERWKGNDSMDETKDEPYAWEAREFLRRKLI
GQDVTFATEKSVNTARTYGTVWLGKDRNDENVIETLVSEGLVNVKRDNRNPTAEQQRLIELENIAKAAKKGKWGDSPTSE
HIRDIKWTVDDPRKLVEKFSKKPIKAVIEFVFDGSTVRAFLLPDFYNITLMISGVRCPGWPNGRRENSVGDPYADEARYF
VESRLLHRDVEIVLESVNNNNFIGSVIHPKGNIAEILLSEGFAKCQDWSISNSRSGAEKLYLAEKAAKEARLRLWKDYKP
SGPQIEFTGTVVEIINADALIIRTQNGENKKVFLSSIRPPTREKKNIEDSNNTARPKDFRPLYDIPWMLEAREFLREKFI
RKNVKVVVDYTQPARDNFPEKLCCTVTCGKTNIAEALVARGLARVIKYRQNDDQRSSHYNLLQVAESKAEKSQHGLHAKK
DIPVHRIVDLSNDPSKAKAFLTSLKRAQGIRGVVEFVTSGSRLKLYLPKEDYVITFVLAGIRTPRCQRTLPGGGVLKADE
YGEKALAFTKEHCFQRDVEIKIENTETKSSGFIGWLTVNDVNMSVALVEEGLAEVVNFPDSGELTRTLKAAEERARAKKL
NVWKNRVEAPVESDKIVDEKEGQERKIDYQKVVISEVTDDLHFYAQSVDQGTMLENMLLQLRQELVANPPLPGAYKPTRG
DLAVAKFSGDDQWYRVKTEKVSGTNVSVFYIDYGNRETLNVTRVADLPARFATDKPYAHEYALACVTLPSDTDDKRAAVD
AFKEDVLDKILLLNVEYKLSSNVIAVSLMHPTSNEDIGKGLISDGFLHVQKHRDRRLTKLIEEYKKAEEDAKHNHRNIWM
YGDVRPEDDDKEFGL
Swiss-ProtStaphylococcal nuclease domain-containing protein 1
KEGG     K15979  SND1; staphylococcal nuclease domain-containing protein 1     
SUPERFAMILYSSF63748  Tudor/PWWP/MBT superfamily     
Gene3DG3DSA:2.30.30.140     
PfamPF00565  SNase; Staphylococcal nuclease homologue     
SMARTSM00318     
ProSiteProfilesPS50304  TUDOR; Tudor domain profile.     
CoilsCoil
PIRSFPIRSF017179     

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