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Gene detail [Fasta]

Species Linepithema humile
GeneLH18556
Positionscf7180001004950:1317075..1323240[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH18556
sequence mRNA: 
>LH18556-RA
ATGGCAGAACGAAGTCGTGCGGGTTTCCTCACGCTTCTCTACTTGGCCTGCTTCGTCGCACAGACGGTGCGATCGAACCC
AGTAAACATCCCGTTGAACCGGGTGCCGTTGACGCTGTGGGAGAGGGCGTGGAGGGCCTTGAACGATCACTCACCGACGC
ATCACCTGTACGCGCACGGCAATTTGATAAATGCGCAAGAATTGATAACTGCTTTATTATTACAGGAAGAGCCACCCTAC
AAAGTCTACAAGTTCACGTATGACTTGAGTCCAATATGTGGAGCGGAATCTTGTCCTAGAGAAGCTTGTACGATTGATCT
GAAGCAAGACGAGAATGGTGACATAGAAACGCTGAATGACTCTATTCAGTGCATGTACTTCTACCCAGCCGACGTGCAGA
ATGACGTGTCGCAAGAGCAGCAGAGCTATCAAGAACAGGATGACTCTCAGGCGACTCAAGAGAATCTGGCCGAACAGATA
AATAGCAATCGGAGCGTCGAATTGGACCACGAGATTCAAGAGAGCAACGACGACAACATCAAACCGTTTATTGCCATGCG
CGCTTCCAGCACCTACTGTCCAGGCTGTCCGTACGAGCTAAATCCGAACTTGCCAGGTCTTCTTGTCTTCGGTGAGCAAG
CGTTGAAGTCGATGGACGAGCAGACTCCAGGCGATTACAAGCACAAGCTGATGAGCATTGTGAGAGTCACTCGCTCGGTA
CCGGTCTCGTCTAACGTAATACAATATCAGTTGCTGCTCCTGATAGGCGAATCCGAGTGTCTGAAGAATGCTTTGGAACA
GGAACAGGAGTGCTTATTGCGAACGACTGTTCCGACCAACTTGTGCCTGGTGACGTTTGAGCAGAGACCTTGGCAACAGG
CGTCTCTCACAATTACCAAGAATAACTGCACAGATTCGGAAAACACGCCTAGTGTCCAATCCCAGCGACCAGAATTGGAG
ACCCAATCCTTAGTAACAGTCACGTTCGAAGAAAAACAATCGCCTCAAACCGAGACAATTGACGCTTACGAAAGCTTGAA
GGCTATGCTGGATAATTACACCCACGCACCTTTGACACCCTCGAAGGAACCCAATGAAGCTGCGATGACGGAGTCTACGA
TTGTAAAGATAGTGTTGAACAGGAGCCAGGATGACGAGAAGATCGTGAGCTTCACGGACAAGAGCAAAGAATTTAGCGAA
TTCTTGGAGGATTTCGATCTGCCTATTAAAGTAGAAGAAGCCACACCAGATACGCGCGAAGTCGTGAAAGAAGAGAAGTT
TCAGCAAAAGAAGATTTCTGCAAAGAACAAGGTCGAAAAGGCAAATGACGGAGAAGACGTCGTCATTAGGAGAAAACGAT
CAAGACCTGGTGCATCTGAATTGATATCTACACAGAATTCTGACATCCAGCTGTATATTGAAAAAGCATTGCGCAAAGTT
TCCCAGGAGTCGGAGAGTCAAAACGAGCCGCTTGTAGTGGAGATCACTGAAGCAAGCGTGCAGACAGTTAGCGGTCGGCT
GTACAAGATCAAGGTGAAATTAGGCACCAGCGATTGCCCCAAGGGCACCAAGGACAATTGTCAGTTGCAAGCCGAGAGCG
ACATTCAGGATTGCGAGATATCGGTATGGTCACGACCGTGGCTCGACAAAGGCGAGCCTCAGATAACAGTGCAATGTTCC
GCGCCAGGAAGAAGGAAACGTTCCCTGCGCGGCGCTAATTACAACCAGAAGATGCTGCAAATCGTTGAGGACATGAAGAC
CGAGCGGCTATTCGACGACTTCGTGGCAACCTACAATCGCACGTATTACACGCCGGAAGAAAGAAACTTGCGACTCAAGA
TATTCCGCGAGAATCTAAATATCATACGACTGTTACGCAAGACCGAGCAGGGCACCGGTCGCTATGGTGTCAACATGTTC
GCCGATGTGTCGCGCGAAGAGTTCCGAATGCTCTACCTCGGCCTGCGACCGGACCTAAGATCGGAGAACGATATTCCTCT
CAAGCAAGCCGAGATTCCAGATATCGAATTGCCGGATACCTTTGACTGGCGGCAAAAGGGCGCCGTGACACCTGTGAAGG
ACCAGGGTGCATGCGGCTCGTGCTGGGCCTTCTCGGTGACGGGGAACGTCGAGGGCCAGTATGCGATCCAGCACGGCCAA
CTGCTATCGCTGTCAGAACAGGAGCTGGTGGACTGCGACAGTTTAGACGATGGCTGCGGCGGTGGTCTTCCAGATAACGC
GTACAGGGCCATCGAACAGCTGGGTGGCCTCGAACTGGAATCGGATTATCCGTACGAAGCGGAAAATGAGAAGTGCCACT
TCAAGAAGAACTTGGCCAAGGTGCAACTAGCTTCTGCTGTTAATATCTCGTCAGACGAGACAAAAATGGCGCAATGGCTG
GTGCAGAACGGTCCGATCTCCATCGGCATCAACGCCAACGCCATGCAGTTTTACGTTGGCGGCGTATCACACCCCTTCAA
ATTTTTATGTAATCCTAAGAACCTGGACCACGGTGTGCTAATCGTTGGATATGGCACAAGCAATTATCCACTGTTCCACA
AAAAGTTACCGTATTGGATCATCAAGAACAGCTGGGGAAAACGATGGGGCGAGCAAGGATACTACAGAGTCTACCGTGGA
GACGGTACCTGTGGGGTTAATTCGATGGCCTCGAGTGCTGTGGTTGTTTAATGCCCAGGTTGACTACATAAATAAGTTTT
TTCATGACAACTTATATTCGTTCTAAACAAGTTATACATGATACATATTATATATATATATATATATAGAGAAAGAGAGA
GATATCCTTTTCTACTAACTTAACGTTAACTTCGGAATTGAATCCATTTGCCTGCCAAATATTTGACAAATGCGACTCAA
CCTCGTCATTATGCTTTATAGTAACCACTTGATATGATACTCAGCTTAATTTTGCAACGATTTGGCAAGCGTATGAATCG
TCTGGAGCCAGTTTTAGATGTGTATGTTGCGCAAGAGTTTGAATTGAGCTAAATTTAATTCTCTGTGTATTTATATCATG
GATGGAAACAATGTAATCGTTGACATATGACAATCCTATTCGTTTATTGAAAGGTTTTAAATCAAATCGTATGGTAACCC
GCTGATGTTTTGCAAATATTGATAAAACAATACAGGATAATATATATACATAACCAAAGTGTGTTATTATGCAACGATGT
TGGGATTAGTGCAATGGAAGATATTAAATGTTAAATAACTTAGCAAAAGTAAATTTTAAGCGCGCATAAAGAGTTAGGGT
AAAGGATGAAACTTTTGAGATACCTGTATATTTTATAGTTTTTAAGTTTGTGAAAAACAGGCAGCATTTTTTTAGATATT
TTATAACGAAGTTTCAAGTTTGCGTAGATCTTGGAGAGTAGTTTTACATACGATTTGTTATAACTTGATTAAATTAAAGA
ATAAACGAAATCTGTAAGAAAGTAAATATACGAACATTCAAGTAGATGTTCGATTTTTATTAAACGTAATATAAAGAGGC
AACTATGCGAAACCACGTCAATTTAATATATTCGAAATGTTTTAGCTTATATTTGAATAAACATATATGAAAAATCAAA
PEP: 
>LH18556-PA
MAERSRAGFLTLLYLACFVAQTVRSNPVNIPLNRVPLTLWERAWRALNDHSPTHHLYAHGNLINAQELITALLLQEEPPY
KVYKFTYDLSPICGAESCPREACTIDLKQDENGDIETLNDSIQCMYFYPADVQNDVSQEQQSYQEQDDSQATQENLAEQI
NSNRSVELDHEIQESNDDNIKPFIAMRASSTYCPGCPYELNPNLPGLLVFGEQALKSMDEQTPGDYKHKLMSIVRVTRSV
PVSSNVIQYQLLLLIGESECLKNALEQEQECLLRTTVPTNLCLVTFEQRPWQQASLTITKNNCTDSENTPSVQSQRPELE
TQSLVTVTFEEKQSPQTETIDAYESLKAMLDNYTHAPLTPSKEPNEAAMTESTIVKIVLNRSQDDEKIVSFTDKSKEFSE
FLEDFDLPIKVEEATPDTREVVKEEKFQQKKISAKNKVEKANDGEDVVIRRKRSRPGASELISTQNSDIQLYIEKALRKV
SQESESQNEPLVVEITEASVQTVSGRLYKIKVKLGTSDCPKGTKDNCQLQAESDIQDCEISVWSRPWLDKGEPQITVQCS
APGRRKRSLRGANYNQKMLQIVEDMKTERLFDDFVATYNRTYYTPEERNLRLKIFRENLNIIRLLRKTEQGTGRYGVNMF
ADVSREEFRMLYLGLRPDLRSENDIPLKQAEIPDIELPDTFDWRQKGAVTPVKDQGACGSCWAFSVTGNVEGQYAIQHGQ
LLSLSEQELVDCDSLDDGCGGGLPDNAYRAIEQLGGLELESDYPYEAENEKCHFKKNLAKVQLASAVNISSDETKMAQWL
VQNGPISIGINANAMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSNYPLFHKKLPYWIIKNSWGKRWGEQGYYRVYRG
DGTCGVNSMASSAVVV
Swiss-ProtPutative cysteine proteinase CG12163
KEGG     K01373  CTSF; cathepsin F [EC:3.4.22.41]     
SUPERFAMILYSSF54403  Cystatin/monellin superfamily     
Gene3DG3DSA:3.90.70.10     
PfamPF00112  Peptidase_C1; Papain family cysteine protease     
SMARTSM00645     
PRINTSPR00705     
ProSitePatternsPS00640  THIOL_PROTEASE_ASN; Eukaryotic thiol (cysteine) proteases asparagine active site.     
OrthologiGroup-00963    Putative cysteine proteinase CG12163      

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