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Gene detail [Fasta]

Species Linepithema humile
GeneLH14593
Positionscf7180001004803:203952..242616[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH14593
sequence mRNA:
>LH14593-RA
ATGGTCAAAGCGAATAAAATGCAACCAGCGTTTGTACGTGTCATTGATGAAAATTCGAAGAATACACTGAGCACAGGTGC
TACTTTAGGACCTATCAACGAGGGTTCAACGATAGCTTTGTATTGTGAGAGTGGCAAAGGCAAACCTATACCTACAGTCG
AGTGGTTTAAAGGTGACCAACCACTTGAAGCGACGAGTTTGTCGACCATCACTGATACCGGAATAGGCGCTGGCAGTAGT
TTACTCAAGATGCAAATTACACGGGAAGAGTTAGATGCAACATTCACGTGTAAAGTCAACAGTATTGCTCTCGTGGAGCC
ACTCTCCGTTAATATTAAACTTGATGTACATGGGAACGAAAATTTATTGCAGTGTAAAGTGCTAGCAGCGCGGCCCGCCG
CCAACGTGACCTGGCAGAACGGAACGCAGTTCGTAAATGAGAGTAATGAAAGATACGACCTACTTGAGACGAAAATACAC
GAAAACGAGGACAGTACATCGGACACGATAAGTTATCTCGCGTTTACGGCATCGGTATACGACAACGGCAGAACGTTTAA
GTGCTACGCCGAGAATTCGGTTACAAATACTGAAGATTTGAAGCCAATGATGAAATCGACAACGATCGAAGTGTTGTATC
CACCAATAATTAATATGAAGCCACACAATATAACAGTTAATGAGTCGAACGACTTTCTAATATTTTGCGACTATGAAGCA
AATCCAGCTTCGCTAAATAAAGTGACATGGTTACGAGACGACGAAGAATTAGTGTTAAACGACGAACATTACGACGGTGG
AATCACAGAACAAACAGCGCTCACGGTGAAAAACGCAACTCCCAACGACATGGGTTTTTACAAATGCATCCTGCAAAATA
ATGCCGGCATATCCATTTCCGAGCAAACCGTGGAGGTTTCAGTCTTTTATAAACCAGTAGTGGAAGTGGTAATGGATCCG
GAGACACCGGTGAACGAGGCGGATCGCGTGAACGTTTCGTTAACGTGCGAGGTCGATGCCGGGAATCCGGCGGCGCTGTC
AGCCGTCCGTTGGTATTTGGACGGTGATCTATTGAAAGAACTTCCGGACTGCCCGAGGAACAGCACTGCCATGACAGCGT
CCACCGAGGAATCGTCGACATTCTGCGACATCGATCCCAGCAAGCTGCTGCTGGAGTCTGTCGGCCGCTCTTTCCACGGC
AACTATTCCTGCGAGGGGAGGAATGAAGCTGGCTGGGGACCAATCTCCCCGAGCACGCCTGTCATAGTTTATTATAAACC
CGGTCCGGCATCAATATTCTATGAACCTCGGCACGTGGTGAAGAAGCAATCATTATCCATCACATGCTTTATTTTGGATC
CTGGACGGCCGAAAGTATCCAGCTTTAAGTGGCTACGCGGCGGGCACAGACTTGCAGGTGAAAACAATGCCACGGTCGTC
ATCGAGTCGGTTAATTTGGAAACCGAAGCGAATTTCACGTGCATGGCTCATAACGAGGCCGGCGACGGCGAGCCAGCATC
AACGTTTATCGACGTATCCGCGGCACCGACATTCATTAAGAAGATGCATTCGTATCGCGGTTTCGTCTACAACTCACCTA
ACGTGAGCATCATGTGTTGGGTCGAATGCGCTCCTATCTGCAATATTTCCTGGCTGAAGGATGACATTGCCATAGACTTC
TCGAAAACGAATCGATACTACGTGTCGAACGTTTATCATCCGCCTAACCTGAGGACCAACGACTTCGAGAGCGTCCAATC
GACCCTCGTGTGGAATCTGACGGCCTGGCCGAACGGTCAGCTCGATCGTGCCGACGATAGCGTCAAATTCACCTGTAAAA
GCAGCAGCAACGGAATTGGACCGGGCGTCGAGAGCAGTACTCACTTCCACGTCGAGTTCCCTCCGGAAGATATCGCGCTA
TCGAAGAAGATAGTCAACGTGACAGTGGACACCATACCGGAAACTGTCGAATGCAGCGCGAAGGCACGACCGAAGGCGAG
CTTTCGATGGTTTCGCGAGGGATCCATCGACACAATTATGGAAGGCCACGTGCTTGACTTCAAAATACCGCTACCGCGAC
GTAGTAATGGCACCTACTACTGCGAGGCATCAAATTATCACGGTTTCCTGAATATTTCAATGGTCATAAATGTGCAATTT
AAACCGGAATGTCACATAAAGAAAGAACGATTCGAGGGCCAGGATTACGTGGTCTGCTCGGCTATCGCCAATCCGGAGAA
GACGGACTTCACCTGGTCGTTGAAGAACGATAACGATACGTTGGAACAAGGCGCAAAAACACGAAACGGAAAAAGTTACA
TGCTTATCGATACTTCGGTCACTAACTTGAGGACATACGTGTGTGTGGCGAATAACACAATTGGTTACTCTATACCATGT
GAACGCGATATACCAGGTCACATACCTTGGTGGCATCAATTGGAGGGTAATCTGCTGCTGATTATTATCATCGTAACAGT
GATCATCATACTAGTTCTGATACTGATTTGCGTGGCCATCTACATCGTGTGTCGACGGAAAAGCAGCGAAATGAAATACG
GTGGACCTCCCAGCCCGACGATATCCTCGGACTCGGTGCAAAGCCCGGCGCAGCCGACGCCGACGCCGGCGCCGAGGTGG
CCTCTGAAGCCAGGCGTGCTGGTGCACATCAATCGGACTCACAGCCTGCGATCCGGCCTGAGCGTTCGCGCAAACGAGGC
TAACCTGCGTAACGAGCTAGTGGCCAAACATAACGACGTGCCGCTCAGACAAAAGTTCCTCGACGAGACGTCATTGTCGT
CGAACGGCCGTAATCCGGCGCGGACGGTATTCCGGCGTGGTAGGAAAGATCAGAGCGGGCAGAGGACGGCCAGCATGAGC
AGTTTGCACGAGGACGGTATGCTCGCCCGTGCTAACAAAATAAAAGCGATGTTTGGCGTACAGCTCAAAGAGCAAACCAC
TCTGCCCGGTATATCCAGAGAAAAGACAGCTGTGACTTATAAGAGAATCGTACCGCGGCAGCAGATATTGCACACCGTGG
AATCATCTCACGAGCTGAATCATGGCAATGTGTCTCGTAAGCGAAAAAAACCCGGAGCAGATCCCAATCAAGCGAATAAC
AATCATGTGAACAGTGTGTCGGAAGCTCTTCCCGACTCCGGGACAAAGACGTTCTACGAAAATTTACCTTTCCACGGGAT
TCAAGCGCCACCTAACAAGTTGGTTTCTCCTAAGTTTGCCCGAATTTCGGCTTTGCATGGCACGTTACATCATTCCGTCA
CGGCCTCGCCGTGCTCCTCACGGCCACCCAGCAGAGCGGTCAGTCTCTGCGACGGCAGTTCCGGCTACGAGTCGATCATG
AGCCACCTAGGGCCTCATTACAACATGCCCAGAAGCAATTCCCCGGTACTTAAATACAACACCTTGAAGCCGCGCGGGCG
CAAGCAGAAGCACTCGGAACATTGCCGCCGGCACGAGAACATTCGCAGGAAATACGAGCTGTACGCGATTCCGATCTACA
AAACGTGCCCGCACAAGAGCGACAGCACGACGACGATCGCGACGATCGTCCGTTCGATGGAGGATGCGCCGTCATTGATT
CTGGACCAAACGTCGGCGTCGATGAGCCTGCTGACCCGATCAGCGCCATCGACACCGATATTGCCGTCACCGACGATGCC
GCCGATACCAGCACCGAGGACGTCTAGAAAAACCGACCCGTCCAAACACACCTACCAAAATGTTCCTCCCCCCGTTTTTC
CACCGAAAAACGCTTCGTTGCCTAAGCTTAAGACCGACAGCCTATACAACTACAAAGAACACTACCAGCAGCAACCTTGG
CAGGAGATGCAGCAACACAACTACCCGTTACCGAGCAACAGTTCGAATCAACTAACACTGCCACTAACGCGCAACCTCTA
CCAGTCCTCGATAGCTAGTCCCCTACAGACCTCCTTCGTTCACACTAACAACAGTCGGCCGTCCACCCTGATGCATCACG
AGAGTGCCACCACCGGCAATCATCTGCCCGCGATGCATCAGGACGAGGAGCAACAGCAACAGCAACAATCGCCGCCGAAT
TACGGCAATCATGACGCGAGACAATTATCATCGCGTCGACACACGACAAATCGACAGAACGAGCGTAATCGAAAGCACCG
CAAACCGAGCGATCGGAGCAAGTCGAAGCAGAGCCGACAGAGAGGGAATCCATCTCCTCGGCGCAACAACGGTTCCCTCG
TGGAGCCGCCTGCCTGCGAGACCAGCTTCCAGGCTCCAGATTTAAGTAATATATCCGAAGGAATGTACAAGATCCCGTAT
CCACACTGTTACGAGGACAATGTCGCGGAGTATTCCGCCGATTACGATGGACCGAATTCGACGGTGACGCACCAGCAACA
GCAGCAGCAGCAGCAGCAGCAACAGTCATGGGAGCACCAGTCGAATCACTGTGCCGGCAACAATACGTCGCAGCTCATCA
CGAACGCGAGCGACGCGAAAGCTCGCAGCAAAACGTTCAAGACAAGGCTGCCGACGAGTCTCAGCGACTTTCGCAAACCG
TCCACGCCCGTGATAATGCAGTACGAGCTTCACTTCCGAGATGTCGGTCAAGAGATTGATGTCTAA
PEP:
>LH14593-PA
MVKANKMQPAFVRVIDENSKNTLSTGATLGPINEGSTIALYCESGKGKPIPTVEWFKGDQPLEATSLSTITDTGIGAGSS
LLKMQITREELDATFTCKVNSIALVEPLSVNIKLDVHGNENLLQCKVLAARPAANVTWQNGTQFVNESNERYDLLETKIH
ENEDSTSDTISYLAFTASVYDNGRTFKCYAENSVTNTEDLKPMMKSTTIEVLYPPIINMKPHNITVNESNDFLIFCDYEA
NPASLNKVTWLRDDEELVLNDEHYDGGITEQTALTVKNATPNDMGFYKCILQNNAGISISEQTVEVSVFYKPVVEVVMDP
ETPVNEADRVNVSLTCEVDAGNPAALSAVRWYLDGDLLKELPDCPRNSTAMTASTEESSTFCDIDPSKLLLESVGRSFHG
NYSCEGRNEAGWGPISPSTPVIVYYKPGPASIFYEPRHVVKKQSLSITCFILDPGRPKVSSFKWLRGGHRLAGENNATVV
IESVNLETEANFTCMAHNEAGDGEPASTFIDVSAAPTFIKKMHSYRGFVYNSPNVSIMCWVECAPICNISWLKDDIAIDF
SKTNRYYVSNVYHPPNLRTNDFESVQSTLVWNLTAWPNGQLDRADDSVKFTCKSSSNGIGPGVESSTHFHVEFPPEDIAL
SKKIVNVTVDTIPETVECSAKARPKASFRWFREGSIDTIMEGHVLDFKIPLPRRSNGTYYCEASNYHGFLNISMVINVQF
KPECHIKKERFEGQDYVVCSAIANPEKTDFTWSLKNDNDTLEQGAKTRNGKSYMLIDTSVTNLRTYVCVANNTIGYSIPC
ERDIPGHIPWWHQLEGNLLLIIIIVTVIIILVLILICVAIYIVCRRKSSEMKYGGPPSPTISSDSVQSPAQPTPTPAPRW
PLKPGVLVHINRTHSLRSGLSVRANEANLRNELVAKHNDVPLRQKFLDETSLSSNGRNPARTVFRRGRKDQSGQRTASMS
SLHEDGMLARANKIKAMFGVQLKEQTTLPGISREKTAVTYKRIVPRQQILHTVESSHELNHGNVSRKRKKPGADPNQANN
NHVNSVSEALPDSGTKTFYENLPFHGIQAPPNKLVSPKFARISALHGTLHHSVTASPCSSRPPSRAVSLCDGSSGYESIM
SHLGPHYNMPRSNSPVLKYNTLKPRGRKQKHSEHCRRHENIRRKYELYAIPIYKTCPHKSDSTTTIATIVRSMEDAPSLI
LDQTSASMSLLTRSAPSTPILPSPTMPPIPAPRTSRKTDPSKHTYQNVPPPVFPPKNASLPKLKTDSLYNYKEHYQQQPW
QEMQQHNYPLPSNSSNQLTLPLTRNLYQSSIASPLQTSFVHTNNSRPSTLMHHESATTGNHLPAMHQDEEQQQQQQSPPN
YGNHDARQLSSRRHTTNRQNERNRKHRKPSDRSKSKQSRQRGNPSPRRNNGSLVEPPACETSFQAPDLSNISEGMYKIPY
PHCYEDNVAEYSADYDGPNSTVTHQQQQQQQQQQQSWEHQSNHCAGNNTSQLITNASDAKARSKTFKTRLPTSLSDFRKP
STPVIMQYELHFRDVGQEIDV
Swiss-ProtHemicentin-2
SUPERFAMILYSSF48726  Immunoglobulin superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF08205  C2-set_2; CD80-like C2-set immunoglobulin domain      
SMARTSM00408     
ProSiteProfilesPS50835  IG_LIKE; Ig-like domain profile.     
OrthologiGroup-00279    Muscle M-line assembly protein unc-89      

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