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Gene detail [Fasta]

Species Linepithema humile
GeneLH13984
Positionscf7180001004750:33559..43719[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/lhum_10/?name=LH13984
sequence mRNA:
>LH13984-RA
ATGTACACCCGGGAAAGATGTTTCCTGCTAGGACTCTGCCTTCTAGGCGGGGTCACCTTTTGCCTGACGGCCGTCGACAC
CGAAGCGCAAATCACCGCAACACCTGACACCAATGACAAAGATATTCAACGAGTGCAGCTACTTGAAGCAGAATTGCAGA
ATGACACGACGGAATCGAGAAGCGCGTACACGACGAAAGAAGTCAGCGCGAAGACAACGAACGAAATTAAGAAAAAGCCC
GTGATGGATTTTAAAGCTAGAAGCGATCAAAAGTATCAGAAACCTATCGTTAAGGACGATGACTCGAGGAGACCTGTAAA
TCCCGATGTTCCGATGACGTCATCGATTTCACCCACGACGATTTCTATGAGGACGAACCAGTCTTCGGCGACGACGAAAA
TCGAGGACGCTACAGATGTGACAATTCCGTTTCTTCTTCACGGTGCACCGATAGCCGCCGTAACGAAGGCGACACCGATG
ACCAATCTTCGAGATATGTCGAACAGTACAGTGAAAGTGACAGACAAAACAACGTCATCGAGAGGCAGAGCTTTGAACAT
TTCCGCTCCGGAGCCAACGAATTCATTGCACGCTAACATTACGGACCTCAGTGATGTCAGCATGGACGAAGACGATAAGG
AAGTTGAAGCGTTGGGGAACTATTTTTCCAACATCAACGTGCTTTTGTTGAGACTACAACAATTCGACCGACTGTCTTTA
GGCGGAGAGTACGTCGCACCGCATAACGAAACTGCCATAAGTATTTCTTCAGCGGAATTTTCGAAGAAATCAGAATGCAC
CTACGAGAATTACACTTATTCAATAGGCGAAAAAATTGTCCGGGGATGCGAGGAGAAGTGCGTGTGCTCCGAGAATGGAA
TCACTGACTGTCAGCCAGTATGCAACGACCGTTTTATCAAAGCGAGCGAAGAAATCGACAAGCCGTATTGTCGGAAGCAC
GTGACCGAGGAAGAGCCATGCTGCGCATTACTTGTTTGCGAGCCGCATTCCGATGGCTGTTCTAGAATATGTGTCTGCGA
GGACGGTGGTCATTTGAAGTGCCAGCCTAGATGTCCACCGAACGAGACTACCACGGCCAATCAACATGATCGCTGCGTGA
CATTAGCTAGCCCCAGCGATCCTTGCTGCAATATCACATATTGCGACGTCACTCTGGGCGATCACGAGATCAAATCGGAG
AACTCCACGGACCTAAATGTACACTTGATAGACGTAAAGGTACTGAATTCGACGGCGGTTAAACTGCAGTTATCTACGAA
GAACCCGGAAGACGTTGTTACAGAGATCTCACAGAACAGTCATGTGTGGAGTCAACGGAAAATCGACAAAGGCAAGCAGA
ATGAGAAAGACAAGGCTGTATATTTCGCAGATGGTGTAATTTCTAATTTGGCACCCGCGCACACGTACTACATTCGCGTG
ACAGAAGGCAGCAACACCGGGCCGGCCATACAAGTGATCCTGCCAGCCGAAGTGATGAAGACGAACGTATCGGAGAAAAC
GCCGGACAAAAACTCTTGCTACTACAAAGGCAAGTCGTACAAGATTGGCGCAGAGTGGTACGACGATTGCGTCTTCTACT
GCGTCTGCCTAGACAACGGCAGCCACGTTTCGAATTCGTGCGCCACGATAGAGTGTCCTACGGACTTCGGACTGGACCTG
CTAAATCCTGACTGTCTCGACTGGGAGACGGTTGACTTTGACCCAAAACCACCGCACTGCTGTCCGCAGGAAGTACAGTG
TAGGAACAATGGCTCCTGTAACTATAAAGGCGTCAACTACAATAATTGGAGCGAGATACCCGCAAATATCACTGGCTGTG
AGAACCATTGTTATTGTGAGATGGGCAATGTGAAGTGTCAACGCGCTTGCTTGCCCGTGCCAGCTCTGCCACCCTCATAT
TTGCCATGCGCTTCCGATGAAGCGACATTGACGCGCAATCTTAACAGATCGTGCTGTATGGAATGGACTTGCAACCGGTC
CTCGTCGCACGGAGTGAACGTGACGACCGCGTACCCCGGCCCCTTGGCCACAAACATTTTTGATCGGCAAACGATCGACA
ATAGACTGAATAACAAGTCGGGAACGCTCAAGCCCAGCCAGGAACCGGAGCATAGCACTTTCTCCTTACCGGAAGACCCG
CGAACTGACAAAACCCAAACAGATGCCACTGTTCACGGACCGCCTCATTATCCTATGGATCCAGGATATCCCACAGTGCC
TTACAGCGGACCCTACAATCCTGATTTCATATCCAGCCATCCAACTGTGGAAAACATATTTCATTTGTCTCCTCATACCG
AAAAGCCGACACCGACTCCAAAGGAAAAGTCAAAGTCGAAGTCTGATTCTAAAAAGCCGGTGGAGCCGGTGAAGCCTTAT
AAGGATGCGATCGATCATTTCCCCGGCCCGTTCTCGCCCGACCGATTCCCCCAAAAGGCCACCTCGACGCTTCCGCGCCC
CGTCAATGAGAATCAGCATATTTCGAATTTGTTAAATACGAAAAAATCGCAACAGAAAGACCATCCGACGCAATTGAGTT
CTCATTCGGATGCAGAAAATATTCCGCCAGCCGATTTTGACGAACAGCTTAACAATTTTACTAGTGAATTTTCTTATCAA
GATTCGATTCCTGTCAAACCTGATGCGATCAAGCCGAACATAATCGTTCCCACGGTTCCAGCGAGGAAACCCACGTCGAA
TAACCCTTATGTCGATATGGAGAGACCGAAACCAACTCCGAATCGGCCGGCGCAAGATGTGCAAAGTACCGAGCAGGAAA
TCTTGTCGGACCATCTGTATCATTTGATTAATTTGCAACACCCTGATAGCCCGATTCAGCTCGATCACACCCTTTCTCAG
GATCACCCGAGTTTGTACGATCAGATTTCTAGTCAAAAGCAGCCGCCCAATAATCGCATGCCGCCCGGCTACTTCGAAAC
GCCGTCTTCCGCGTCGAAGAAGACGAAGCCCCACATCTTCGCGCAGAAGGACGAGAACGGGCAGGTCACTTATCACATTC
ACACGCCCAACATTCCGCATTCCCCGCAGCAGATCGAAGAATTGTTAGAATACATCAACCAGCACCACTCGAAACCCGGA
CCCTTCCAACACTATCCCGGACAACCAGCCGTGACTCACAATATACCGAGCGGCACGCCACCCCGTTTACCGCCTCACAC
GGATTCCCAAATACCGCATTCAGGTTTCGCGCACTTGAATCTCCCATTTGCAGCACAAGCGTCCAATCAGTCAGGTCAGG
GACATGACAATGTATATCCAGGCTATCCCGGGAATATTCCTGGATTCTCAGCCGCACTTCCCACCGACGAAATTACAATA
CAAGAATTGGAGGCGCTGGACGAACATACAGTTCGAGTAACATTTGTTATACCTCAGGTTTTTGTGGGATTGCATGGAAG
GATCGAGCTGCGATACACCAGCGATAGAGAAAATCACAACTTGTCCACGTGGAGAACACAACTATACAGTCTTCCTAATG
ACTTAATCGAGAGGCCTCATTTGGAATTTGAATTAGACAATTTGCAGCCGTCAACCGAATACAAGGTGAAGATCACGGTG
AAGCTGAAGAATTTGACTAATAGTCCAACTAGCAAAATTTACTCTGTGCGTACGTTGGACAAGCTCGTGAACGAGTCAAT
TTTGCCGCCGCAAATACCAGTTGACACCGAGCTTCAAATAGTGGAGGTCAACTCAACTTGGATTAACGTAATGTGGAAGA
AATTTACGGTATATGAATTGGAATTCATAGACGGTGTTCAATTGAGATATAAAGAGAATGATACGCATAGTAAAATTTAT
TCAACGACACCGTTAATTCATCGCGCTGTAACGAATTACGTAATCGAAAATCTGAAACCATCGACCACATATGAAGTCGG
CATCTACTTCATACCATTCCCGGGGCAAGCTACGGAATTGTGGAGTGAGAAGACGATTGAGGTAACCACGTCTACGGAGC
CAGACCCCTATTCGTTTGAAGTAAAAGTCGAGATTAAGACCATCAAGTCGACAGACGTAGAAGTGTCATGGAGTGGCGTG
CCTTATCCAGAAGACAAATACGTAAACATCTATCGTGCGATCTATCAAAGCGATACCGGCAAAGAAGATACCAGTAAATT
CAAGATTGCCAAGAGAGACTCTCACGCCAAAACATTAATTAGTGATCTCAAGCCTGGCACTCGATATCGATTGTGGCTTG
AAATATATTTGACGAATGGTAGAATAAAGAAGAGTAATGTGCAAGATTTTATCACTAAACCGGGTACCGTCTTAGCGGCC
ACTGTCCCTCAACAAGCCGGAAAATTCACGACGCTGCCTCTCCACGAAGGAGATTACTACGGTCCCCTGGTGATAGTGGC
TATTGTGGCTTCCTTGGCGATATTATCGACTCTGATTCTGTTAATGATGCTAATGAAGAGACGAACGAGTAGTAAGGCCG
ACATATCACCCCGTAAAGCGACGTCAGCGTACGACAATCCTTCCTACAAGGTAGAATTACAACAAGAAACTATGGGTAAT
TTGCTATTATTGTTTTGTTCGTAA
PEP:
>LH13984-PA
MYTRERCFLLGLCLLGGVTFCLTAVDTEAQITATPDTNDKDIQRVQLLEAELQNDTTESRSAYTTKEVSAKTTNEIKKKP
VMDFKARSDQKYQKPIVKDDDSRRPVNPDVPMTSSISPTTISMRTNQSSATTKIEDATDVTIPFLLHGAPIAAVTKATPM
TNLRDMSNSTVKVTDKTTSSRGRALNISAPEPTNSLHANITDLSDVSMDEDDKEVEALGNYFSNINVLLLRLQQFDRLSL
GGEYVAPHNETAISISSAEFSKKSECTYENYTYSIGEKIVRGCEEKCVCSENGITDCQPVCNDRFIKASEEIDKPYCRKH
VTEEEPCCALLVCEPHSDGCSRICVCEDGGHLKCQPRCPPNETTTANQHDRCVTLASPSDPCCNITYCDVTLGDHEIKSE
NSTDLNVHLIDVKVLNSTAVKLQLSTKNPEDVVTEISQNSHVWSQRKIDKGKQNEKDKAVYFADGVISNLAPAHTYYIRV
TEGSNTGPAIQVILPAEVMKTNVSEKTPDKNSCYYKGKSYKIGAEWYDDCVFYCVCLDNGSHVSNSCATIECPTDFGLDL
LNPDCLDWETVDFDPKPPHCCPQEVQCRNNGSCNYKGVNYNNWSEIPANITGCENHCYCEMGNVKCQRACLPVPALPPSY
LPCASDEATLTRNLNRSCCMEWTCNRSSSHGVNVTTAYPGPLATNIFDRQTIDNRLNNKSGTLKPSQEPEHSTFSLPEDP
RTDKTQTDATVHGPPHYPMDPGYPTVPYSGPYNPDFISSHPTVENIFHLSPHTEKPTPTPKEKSKSKSDSKKPVEPVKPY
KDAIDHFPGPFSPDRFPQKATSTLPRPVNENQHISNLLNTKKSQQKDHPTQLSSHSDAENIPPADFDEQLNNFTSEFSYQ
DSIPVKPDAIKPNIIVPTVPARKPTSNNPYVDMERPKPTPNRPAQDVQSTEQEILSDHLYHLINLQHPDSPIQLDHTLSQ
DHPSLYDQISSQKQPPNNRMPPGYFETPSSASKKTKPHIFAQKDENGQVTYHIHTPNIPHSPQQIEELLEYINQHHSKPG
PFQHYPGQPAVTHNIPSGTPPRLPPHTDSQIPHSGFAHLNLPFAAQASNQSGQGHDNVYPGYPGNIPGFSAALPTDEITI
QELEALDEHTVRVTFVIPQVFVGLHGRIELRYTSDRENHNLSTWRTQLYSLPNDLIERPHLEFELDNLQPSTEYKVKITV
KLKNLTNSPTSKIYSVRTLDKLVNESILPPQIPVDTELQIVEVNSTWINVMWKKFTVYELEFIDGVQLRYKENDTHSKIY
STTPLIHRAVTNYVIENLKPSTTYEVGIYFIPFPGQATELWSEKTIEVTTSTEPDPYSFEVKVEIKTIKSTDVEVSWSGV
PYPEDKYVNIYRAIYQSDTGKEDTSKFKIAKRDSHAKTLISDLKPGTRYRLWLEIYLTNGRIKKSNVQDFITKPGTVLAA
TVPQQAGKFTTLPLHEGDYYGPLVIVAIVASLAILSTLILLMMLMKRRTSSKADISPRKATSAYDNPSYKVELQQETMGN
LLLLFCS
Swiss-ProtPutative epidermal cell surface receptor
SUPERFAMILYSSF49265  Fibronectin type III superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF00041  fn3; Fibronectin type III domain     
SMARTSM00214     
ProSiteProfilesPS50184  VWFC_2; VWFC domain profile.     
OrthologiGroup-00284    Putative epidermal cell surface receptor      

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